Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_P24
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 82 8e-17
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 31 0.19
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 29 0.77
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz... 27 1.8
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 27 3.1
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 27 3.1
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 25 7.2
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.5
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 9.5
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 81.8 bits (193), Expect = 8e-17
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Frame = +2
Query: 245 YLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEEAKIRPYLPADKQFLITR 424
++TP K S F+ TG+++PEEFV AGD+LV PTW W G+ +IR +LP DKQ+L+TR
Sbjct: 15 HITPASKTSDFENTGMISPEEFVLAGDYLVSKFPTWSWECGD--RIRGFLPKDKQYLVTR 72
Query: 425 NVPCYRRCKQIEYCEDKEKVIED-----ENDADGGWVDTHHYDNAGSPALE 562
+V C +R I E+ + D ++D D + + H D + + E
Sbjct: 73 HVFCVQRNINIGVNEEWVDIETDDTRNKDDDQDDDAISSIHSDTSDIASAE 123
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 30.7 bits (66), Expect = 0.19
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Frame = +2
Query: 140 KXQLIVFLTTHNPIRDITMQSVINTV-----KGTALGVAGYLTPVLKESKFQETGVLTPE 304
K ++IV T HNP+ I + +N + K L V+ + L F L PE
Sbjct: 177 KTKMIVINTPHNPLGKIFSEEELNEIADLVLKHNLLVVSDEVYDRLSFVPFVRLATLRPE 236
Query: 305 EF---VAAGD-HLVHHCPTWQ--WAKGEEAKIRPYLPADKQFLITRNVPC 436
F V G C W+ W G+E+ I+ A + N PC
Sbjct: 237 LFKHVVTVGSGGKTFGCTGWRVGWLIGDESLIKYSAAAHTRICFAVNSPC 286
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 28.7 bits (61), Expect = 0.77
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 146 QLIVFLTTHNPIRDITMQSVINTVKGTALGVAG-YL-TPVLKESK 274
QL ++ +HNPI+ S+ + +G GV G Y+ T VLK K
Sbjct: 340 QLCTYIDSHNPIQFHLPHSISSFFRGVGSGVMGEYIETDVLKHLK 384
>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 702
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +2
Query: 149 LIVFLTTHNPIRDITMQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDH 328
++V +T +P +T + + LG+ G L V + ET V PE+ +
Sbjct: 515 ILVIITVFDPELMVTFEITKDRSVLFYLGLFGSLIAVSRSIIPDETLVFAPEKALRRVIT 574
Query: 329 LVHHCPTWQWAKGEEAK 379
H+ P W W+ +K
Sbjct: 575 FTHYMPGW-WSDNMHSK 590
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 347 TWQWAKGEEAKIRPYLPADKQFL 415
TW++ EEA+ RP A+K FL
Sbjct: 33 TWEYVTKEEAEKRPLTIAEKYFL 55
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 473 KEKVIEDENDADGGWVDTHHYDNAGSP 553
+E VIED++D D WV D A SP
Sbjct: 404 QENVIEDDDDDDDAWVSV---DEAESP 427
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 25.4 bits (53), Expect = 7.2
Identities = 24/71 (33%), Positives = 26/71 (36%)
Frame = +2
Query: 335 HHCPTWQWAKGEEAKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGG 514
H P W W KG L DK IT V I KEK + E D
Sbjct: 4 HITPIWMW-KGTGNNYAYLLTCDKT-KITAIVDPAEPESVIPVI--KEKTAKKEIDLQYI 59
Query: 515 WVDTHHYDNAG 547
HHYD+AG
Sbjct: 60 LTTHHHYDHAG 70
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 401 DKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSP 553
DKQ+ T++V +R + + K+ V+ D N DG D+ D+A +P
Sbjct: 29 DKQYQSTKDVT-FRLVLVQDIGDRKKTVLFDSNHVDGQKGDSVLRDSANAP 78
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 305 LQESVHQFLEISIPSTPVSSNRPRQEQFPLLCLL 204
+Q+ + +++IPS P+S +P E+ ++ L
Sbjct: 576 MQDQLDHLRKLNIPSLPLSGEQPADERRQVISFL 609
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,301,144
Number of Sequences: 5004
Number of extensions: 43977
Number of successful extensions: 147
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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