Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_P24
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024221-1|AAH24221.1| 314|Homo sapiens ATG3 autophagy related ... 208 2e-53
BC002830-1|AAH02830.1| 317|Homo sapiens ATG3 protein protein. 208 2e-53
AF202092-1|AAG35611.1| 314|Homo sapiens PC3-96 protein. 208 2e-53
AB079384-1|BAB90843.1| 314|Homo sapiens Apg3p protein. 208 2e-53
AK024031-1|BAB14790.1| 279|Homo sapiens protein ( Homo sapiens ... 33 0.88
AK022683-1|BAB14177.1| 545|Homo sapiens protein ( Homo sapiens ... 33 0.88
AK001360-1|BAA91648.1| 627|Homo sapiens protein ( Homo sapiens ... 33 0.88
CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein. 31 2.7
AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open read... 31 2.7
AK026712-1|BAB15536.1| 546|Homo sapiens protein ( Homo sapiens ... 31 2.7
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 30 8.2
>BC024221-1|AAH24221.1| 314|Homo sapiens ATG3 autophagy related 3
homolog (S. cerevisiae) protein.
Length = 314
Score = 208 bits (507), Expect = 2e-53
Identities = 94/132 (71%), Positives = 110/132 (83%)
Frame = +2
Query: 194 MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 373
MQ+VINTVKG AL VA YLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA GEE
Sbjct: 1 MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60
Query: 374 AKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSP 553
K++ YLP KQFL+T+NVPCY+RCKQ+EY ++ E +IE E+D DGGWVDT+H N G
Sbjct: 61 LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIE-EDDGDGGWVDTYH--NTGIT 117
Query: 554 ALEEKVCEMTLE 589
+ E V E+TLE
Sbjct: 118 GITEAVKEITLE 129
>BC002830-1|AAH02830.1| 317|Homo sapiens ATG3 protein protein.
Length = 317
Score = 208 bits (507), Expect = 2e-53
Identities = 94/132 (71%), Positives = 110/132 (83%)
Frame = +2
Query: 194 MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 373
MQ+VINTVKG AL VA YLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA GEE
Sbjct: 1 MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60
Query: 374 AKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSP 553
K++ YLP KQFL+T+NVPCY+RCKQ+EY ++ E +IE E+D DGGWVDT+H N G
Sbjct: 61 LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIE-EDDGDGGWVDTYH--NTGIT 117
Query: 554 ALEEKVCEMTLE 589
+ E V E+TLE
Sbjct: 118 GITEAVKEITLE 129
>AF202092-1|AAG35611.1| 314|Homo sapiens PC3-96 protein.
Length = 314
Score = 208 bits (507), Expect = 2e-53
Identities = 94/132 (71%), Positives = 110/132 (83%)
Frame = +2
Query: 194 MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 373
MQ+VINTVKG AL VA YLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA GEE
Sbjct: 1 MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60
Query: 374 AKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSP 553
K++ YLP KQFL+T+NVPCY+RCKQ+EY ++ E +IE E+D DGGWVDT+H N G
Sbjct: 61 LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIE-EDDGDGGWVDTYH--NTGIT 117
Query: 554 ALEEKVCEMTLE 589
+ E V E+TLE
Sbjct: 118 GITEAVKEITLE 129
>AB079384-1|BAB90843.1| 314|Homo sapiens Apg3p protein.
Length = 314
Score = 208 bits (507), Expect = 2e-53
Identities = 94/132 (71%), Positives = 110/132 (83%)
Frame = +2
Query: 194 MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 373
MQ+VINTVKG AL VA YLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA GEE
Sbjct: 1 MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60
Query: 374 AKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSP 553
K++ YLP KQFL+T+NVPCY+RCKQ+EY ++ E +IE E+D DGGWVDT+H N G
Sbjct: 61 LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIE-EDDGDGGWVDTYH--NTGIT 117
Query: 554 ALEEKVCEMTLE 589
+ E V E+TLE
Sbjct: 118 GITEAVKEITLE 129
>AK024031-1|BAB14790.1| 279|Homo sapiens protein ( Homo sapiens
cDNA FLJ13969 fis, clone Y79AA1001511. ).
Length = 279
Score = 33.1 bits (72), Expect = 0.88
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 371 EAKIRPYLPAD-KQFLITRNVPCYRRCKQIEYCED--KEKVIEDENDADGGWVDTHHYDN 541
EA+++ Y D K ++ V + + E ED + + +E DADG W+D H +
Sbjct: 53 EARVQEYGELDAKDYIPGAEVLEVEKEENAENDEDGWESTSLSEEEDADGEWIDVQHSSD 112
Query: 542 AGSPALEEKVCEMTLE 589
+ +K+ M +E
Sbjct: 113 EEQQEISKKLNSMPME 128
>AK022683-1|BAB14177.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ12621 fis, clone NT2RM4001715. ).
Length = 545
Score = 33.1 bits (72), Expect = 0.88
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 371 EAKIRPYLPAD-KQFLITRNVPCYRRCKQIEYCED--KEKVIEDENDADGGWVDTHHYDN 541
EA+++ Y D K ++ V + + E ED + + +E DADG W+D H +
Sbjct: 364 EARVQEYGELDAKDYIPGAEVLEVEKEENAENDEDGWESTSLSEEEDADGEWIDVQHSSD 423
Query: 542 AGSPALEEKVCEMTLE 589
+ +K+ M +E
Sbjct: 424 EEQQEISKKLNSMPME 439
>AK001360-1|BAA91648.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ10498 fis, clone NT2RP2000328. ).
Length = 627
Score = 33.1 bits (72), Expect = 0.88
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 371 EAKIRPYLPAD-KQFLITRNVPCYRRCKQIEYCED--KEKVIEDENDADGGWVDTHHYDN 541
EA+++ Y D K ++ V + + E ED + + +E DADG W+D H +
Sbjct: 401 EARVQEYGELDAKDYIPGAEVLEVEKEENAENDEDGWESTSLSEEEDADGEWIDVQHSSD 460
Query: 542 AGSPALEEKVCEMTLE 589
+ +K+ M +E
Sbjct: 461 EEQQEISKKLNSMPME 476
>CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein.
Length = 2151
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = -1
Query: 460 FNLFTSSVAWHVSSYKELFVCRKVRPNLSFLSLCPLPGRAVVHQVVTSSHKLFRSQYTSF 281
F S + H +++ C +VR N+S ++C ++ ++Y +
Sbjct: 768 FPQVVSVIECHSVQSQDISSCHRVRKNVSQENMCSASAAFKSSKISLQVDNSLITKYENA 827
Query: 280 LKFRFLQHRCQVTGHAKSSSLYCVYYT 200
+ R H CQ TGH+ S V YT
Sbjct: 828 FQHR--DHCCQGTGHSVEKSSCKVSYT 852
>AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open reading
frame 30 protein.
Length = 2151
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = -1
Query: 460 FNLFTSSVAWHVSSYKELFVCRKVRPNLSFLSLCPLPGRAVVHQVVTSSHKLFRSQYTSF 281
F S + H +++ C +VR N+S ++C ++ ++Y +
Sbjct: 768 FPQVVSVIECHSVQSQDISSCHRVRKNVSQENMCSASAAFKSSKISLQVDNSLITKYENA 827
Query: 280 LKFRFLQHRCQVTGHAKSSSLYCVYYT 200
+ R H CQ TGH+ S V YT
Sbjct: 828 FQHR--DHCCQGTGHSVEKSSCKVSYT 852
>AK026712-1|BAB15536.1| 546|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23059 fis, clone LNG03912. ).
Length = 546
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = -1
Query: 460 FNLFTSSVAWHVSSYKELFVCRKVRPNLSFLSLCPLPGRAVVHQVVTSSHKLFRSQYTSF 281
F S + H +++ C +VR N+S ++C ++ ++Y +
Sbjct: 137 FPQVVSVIECHSVQSQDISSCHRVRKNVSQENMCSASAAFKSSKISLQVDNSLITKYENA 196
Query: 280 LKFRFLQHRCQVTGHAKSSSLYCVYYT 200
+ R H CQ TGH+ S V YT
Sbjct: 197 FQHR--DHCCQGTGHSVEKSSCKVSYT 221
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 467 EDKEKVIEDENDADGGWVDTHHYDNAGSPALEE 565
ED+E+ +E+E++A GG + A SP LEE
Sbjct: 708 EDEEEELEEEDEASGGGYRLGARERALSPGLEE 740
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,846,716
Number of Sequences: 237096
Number of extensions: 1735035
Number of successful extensions: 3940
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3932
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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