Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_P23
(709 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00003BFDF7 Cluster: PREDICTED: similar to CG17233-PA... 89 1e-16
UniRef50_UPI0000D55C71 Cluster: PREDICTED: similar to CG17233-PA... 56 6e-07
UniRef50_UPI00015B62CD Cluster: PREDICTED: similar to conserved ... 56 1e-06
UniRef50_UPI0000DB7E08 Cluster: PREDICTED: similar to CG17233-PA... 55 1e-06
UniRef50_Q2M0W5 Cluster: GA14405-PA; n=1; Drosophila pseudoobscu... 54 3e-06
UniRef50_Q9VWA0 Cluster: CG17233-PC, isoform C; n=5; Drosophila ... 51 3e-05
UniRef50_Q7Q050 Cluster: ENSANGP00000016510; n=2; Culicidae|Rep:... 43 0.006
UniRef50_Q9VLE1 Cluster: CG13108-PA; n=2; Sophophora|Rep: CG1310... 40 0.060
UniRef50_Q2UN29 Cluster: Predicted protein; n=1; Aspergillus ory... 40 0.079
UniRef50_Q8MM36 Cluster: EOR-2; n=2; Caenorhabditis elegans|Rep:... 39 0.10
UniRef50_Q9C2K7 Cluster: Related to nuclear protein SA-1; n=8; P... 37 0.56
UniRef50_Q61PF7 Cluster: Putative uncharacterized protein CBG075... 36 0.74
UniRef50_Q2GRW7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.74
UniRef50_A2QK66 Cluster: Contig An04c0360, complete genome; n=1;... 35 1.7
UniRef50_UPI000069DB80 Cluster: UPI000069DB80 related cluster; n... 34 3.0
UniRef50_Q8IQT4 Cluster: CG14073-PB, isoform B; n=3; Drosophila ... 34 3.0
UniRef50_Q7RM28 Cluster: FK506-binding protein; n=6; Plasmodium|... 34 3.0
UniRef50_Q54QM3 Cluster: PHD Zn finger-containing protein; n=1; ... 34 3.0
UniRef50_A2DP32 Cluster: Putative uncharacterized protein; n=4; ... 34 3.0
UniRef50_A4T1G1 Cluster: PE-PPE, C-terminal domain protein precu... 34 3.9
UniRef50_Q5KGJ0 Cluster: Replication control protein 1, putative... 34 3.9
UniRef50_Q0UZL8 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 3.9
UniRef50_P41848 Cluster: FACT complex subunit SSRP1-A; n=5; Chro... 34 3.9
UniRef50_UPI00015A3EDA Cluster: UPI00015A3EDA related cluster; n... 33 5.2
UniRef50_Q4S0X4 Cluster: Chromosome 5 SCAF14773, whole genome sh... 33 5.2
UniRef50_Q0AQ49 Cluster: Ribonuclease, Rne/Rng family; n=2; Alph... 33 5.2
UniRef50_A1A388 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q8IC29 Cluster: Putative uncharacterized protein MAL7P1... 33 5.2
UniRef50_Q6C5Q3 Cluster: Similar to sp|O74161 Candida albicans C... 33 5.2
UniRef50_UPI0000584AAA Cluster: PREDICTED: similar to MGC69335 p... 33 6.9
UniRef50_UPI0000583DC9 Cluster: PREDICTED: hypothetical protein;... 33 6.9
UniRef50_Q9VQK7 Cluster: CG3605-PA; n=5; Endopterygota|Rep: CG36... 33 6.9
UniRef50_Q554A7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.9
UniRef50_A5K579 Cluster: Putative uncharacterized protein; n=3; ... 33 6.9
UniRef50_Q4VXL5 Cluster: Transforming, acidic coiled-coil contai... 33 6.9
UniRef50_A3CXW5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_O95359 Cluster: Transforming acidic coiled-coil-contain... 33 6.9
UniRef50_P38630 Cluster: Replication factor C subunit 1; n=11; S... 33 6.9
UniRef50_Q66IN2 Cluster: Glutamine and serine-rich protein 1; n=... 33 6.9
UniRef50_UPI0001552ABE Cluster: PREDICTED: hypothetical protein;... 33 9.1
UniRef50_UPI00015529DA Cluster: PREDICTED: hypothetical protein;... 33 9.1
UniRef50_UPI00006CBA50 Cluster: hypothetical protein TTHERM_0049... 33 9.1
UniRef50_UPI000023F3B2 Cluster: hypothetical protein FG08481.1; ... 33 9.1
UniRef50_UPI000023F047 Cluster: hypothetical protein FG07139.1; ... 33 9.1
UniRef50_Q54XM9 Cluster: Transcription initiation factor TFIID s... 33 9.1
UniRef50_Q4UG52 Cluster: Putative uncharacterized protein; n=3; ... 33 9.1
UniRef50_Q8SWH0 Cluster: Putative uncharacterized protein ECU02_... 33 9.1
UniRef50_Q7ZA72 Cluster: Related to multidrug resistant protein;... 33 9.1
UniRef50_Q2KHR3 Cluster: Glutamine and serine-rich protein 1; n=... 33 9.1
UniRef50_Q61771 Cluster: Kinesin-like protein KIF3B; n=20; Eutel... 33 9.1
>UniRef50_UPI00003BFDF7 Cluster: PREDICTED: similar to CG17233-PA,
isoform A; n=2; Apocrita|Rep: PREDICTED: similar to
CG17233-PA, isoform A - Apis mellifera
Length = 220
Score = 89.0 bits (211), Expect = 1e-16
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Frame = +2
Query: 110 LKLNEEDSDGSGQGAE-PEEFQD-SGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKK-- 277
+K ++ SD A+ PEE + S E+WTP+A + A + ++ V+K ++ +++
Sbjct: 1 MKKTKDVSDEDEYSADDPEEVEGASEEEWTPEAGAESGAKKRPQREVAKKRQHSEEEEDE 60
Query: 278 -RKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGSDGNKSDSSQ----SKDVPKH 442
+ K D SD + S + PK
Sbjct: 61 EEEEDEEEDDEEDEESDSDTGKKPKRKRRSKKEEDEKEDEDEEDSDDNSYNESSGETPKD 120
Query: 443 FHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSG 622
F SG FV+ K+D+ G+T D LW+IDGKALLQKF+P + +G+ L+K T YSG
Sbjct: 121 FTSGAFVVAKADI---GNTDGGNTDP-TLWRIDGKALLQKFLPFKEDGKTLYKSTSTYSG 176
Query: 623 WNVDNRDNYYPITEILDRNPRTDS 694
W+V+N+D Y RT++
Sbjct: 177 WSVNNKDKYLAAQVTFKVQSRTET 200
>UniRef50_UPI0000D55C71 Cluster: PREDICTED: similar to CG17233-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG17233-PA, isoform A - Tribolium castaneum
Length = 1175
Score = 56.4 bits (130), Expect = 6e-07
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 6/174 (3%)
Frame = +2
Query: 155 EPEEFQDSGED--WTPDA--DSNE--PASRTSRKRVSKPPVNNTKKKRKNXXXXXXXXXX 316
EP EFQDS D WTP A D E P S+ SRK +K N
Sbjct: 763 EPPEFQDSDSDPAWTPQAKEDGEEIIPISKKSRKSSAKKR-RNLITAAAQGAGIHEIDGY 821
Query: 317 XXXXXXXXXXXXXXXXXXXXXXKNGSDGNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGD 496
N + ++ + D P F G FV+++S++ D
Sbjct: 822 VSDNSKKNKGSKNKQNAPPTLEDNIAASLSNNVVTNDDNP--FKPGEFVVIRSELSQDWP 879
Query: 497 TVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI 658
+ W++DGK LLQK+ P E NG L++ Y+ W +++ Y I
Sbjct: 880 AI---------WRVDGKTLLQKYEPFEQNGVTLYRNISTYTSWTPESKKQYISI 924
>UniRef50_UPI00015B62CD Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 2037
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 527 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI 658
LW+IDGK LLQK+ P +SNG+ L++ YSGW NR Y +
Sbjct: 1145 LWRIDGKTLLQKYEPFQSNGKTLYRNISTYSGWTPQNRHAYQQV 1188
>UniRef50_UPI0000DB7E08 Cluster: PREDICTED: similar to CG17233-PA,
isoform A isoform 2; n=1; Apis mellifera|Rep: PREDICTED:
similar to CG17233-PA, isoform A isoform 2 - Apis
mellifera
Length = 1545
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +2
Query: 449 SGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWN 628
SG FV++K+D+ + LW+IDGK LLQK+ P +SNG+ L++ YSGW
Sbjct: 1179 SGEFVVIKTDLNEEYPP---------LWRIDGKTLLQKYEPFKSNGKTLYRNISTYSGWA 1229
Query: 629 VDNRDNYYPI 658
NR Y +
Sbjct: 1230 PQNRHIYQQV 1239
>UniRef50_Q2M0W5 Cluster: GA14405-PA; n=1; Drosophila
pseudoobscura|Rep: GA14405-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1337
Score = 54.0 bits (124), Expect = 3e-06
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Frame = +2
Query: 107 SLKLNEEDSDGSGQGA-EPE-EFQDSGED--WTPDADSNEPASRTSRKRVSKPPVNNTKK 274
+L LN + G EPE EF DS D WTP D ++ A + KR K +
Sbjct: 918 ALLLNSTAAAGENSAVGEPEAEFTDSDTDPVWTPQEDDSDDAGKGYGKR--KIARRSKGT 975
Query: 275 KRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGSDGNKSDSSQSKDVPKHFHSG 454
RKN G G S ++ + ++F +G
Sbjct: 976 PRKNTYENPSQMQPQPAGDGYNPQQDMSGV--------GDVGYGSAAAGTAATAENFKTG 1027
Query: 455 NFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVD 634
+F++L+SD+ D T+ W++D K +LQK+ P NG+ ++ Y+ WN++
Sbjct: 1028 DFIVLRSDLVNDWPTI---------WQVDSKCILQKYEPFRQNGKTFYRNMSKYASWNLE 1078
Query: 635 NRDNY 649
+ Y
Sbjct: 1079 TKKLY 1083
>UniRef50_Q9VWA0 Cluster: CG17233-PC, isoform C; n=5; Drosophila
melanogaster|Rep: CG17233-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 1465
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +2
Query: 398 GNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPME 577
G S SS ++F +G+F++L+SD+ D T+ W++D K +LQK+ P
Sbjct: 1138 GYASASSGPAANSENFKTGDFIVLRSDLVNDWPTI---------WQVDSKCILQKYEPFR 1188
Query: 578 SNGRVLHKCTCVYSGWNVDNRDNY 649
NG+ ++ Y+ WN++ + Y
Sbjct: 1189 QNGKTFYRNMSKYASWNLETKKLY 1212
>UniRef50_Q7Q050 Cluster: ENSANGP00000016510; n=2; Culicidae|Rep:
ENSANGP00000016510 - Anopheles gambiae str. PEST
Length = 485
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 527 LWKIDGKALLQKFIPMES-NGRVLHKCTCVYSGWNVDNRDNY 649
+W++D K LLQK+ P + +G+VL++ YS WN +++ Y
Sbjct: 185 IWRVDDKMLLQKYEPFDDQSGKVLYRHVTTYSAWNEESKKKY 226
>UniRef50_Q9VLE1 Cluster: CG13108-PA; n=2; Sophophora|Rep:
CG13108-PA - Drosophila melanogaster (Fruit fly)
Length = 233
Score = 39.9 bits (89), Expect = 0.060
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Frame = +2
Query: 167 FQDSGED-WTPDADSNEPASRTSRKRVSKPPVNNTKKKRKNXXXXXXXXXXXXXXXXXXX 343
F++S ED ++PD +E R ++KR SKP ++ +KRK+
Sbjct: 12 FEESDEDDFSPDDSDSEEDWRPTKKRPSKPSGSDGGRKRKSAAANASKAKRRMAKVSDEE 71
Query: 344 XXXXXXXXXXXXXKNGSDGNKSDSSQSKDVP--KHF--HSGNFVLLKSDVKWDGDTVISK 511
+ + S S + + +P K F S +L+K + D + K
Sbjct: 72 SDEEDDLETDPSDDDFDYPSASTSKRPQSLPPKKQFVKLSQLDLLVKKSDLMENDWL--K 129
Query: 512 LDELNLWKIDGKA-LLQKFIPMES---NGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDR 676
+ L LW+ D + LLQK++ ++S +L + VYS W+ ++ + LD
Sbjct: 130 NNRLCLWRKDEQTNLLQKYLRVKSAAEEEELLFTSSSVYSSWDDQQTSDFIEVKVNCLDP 189
Query: 677 NPR 685
N R
Sbjct: 190 NNR 192
>UniRef50_Q2UN29 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 775
Score = 39.5 bits (88), Expect = 0.079
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 68 SRTIPIKXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNE 214
S+T P + +R +LKL E+D G+EPE G D PD +++E
Sbjct: 99 SKTTPSRKAKRRANLKLKEKDDREGESGSEPERESGGGSDNRPDEEADE 147
>UniRef50_Q8MM36 Cluster: EOR-2; n=2; Caenorhabditis elegans|Rep:
EOR-2 - Caenorhabditis elegans
Length = 972
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +2
Query: 491 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 652
G VI K D L +W++D + LLQKF P + R++++ + YSGW Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701
Query: 653 PITEILDRNPRTDS 694
+ + + R+++
Sbjct: 702 RVAVKIIKQTRSET 715
>UniRef50_Q9C2K7 Cluster: Related to nuclear protein SA-1; n=8;
Pezizomycotina|Rep: Related to nuclear protein SA-1 -
Neurospora crassa
Length = 1226
Score = 36.7 bits (81), Expect = 0.56
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +2
Query: 92 MXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTK 271
+ KRK N+E DG + PEE D +D PDA E + SRKR KP + K
Sbjct: 47 LSKRKRASENDEGEDGENE--SPEEGPDEDDD--PDASEVEQERQRSRKR--KPSSQSAK 100
Query: 272 KKR 280
K+
Sbjct: 101 AKK 103
>UniRef50_Q61PF7 Cluster: Putative uncharacterized protein CBG07561;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG07561 - Caenorhabditis
briggsae
Length = 1022
Score = 36.3 bits (80), Expect = 0.74
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 515 DELNLWKIDGKALLQKFIPME--SNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRN 679
D+ +W++D + LLQKF P +++++ + YSGW +Y+ + IL +N
Sbjct: 703 DDCAVWRVDNQNLLQKFPPFRDTKTNKLVYRSSSTYSGWCEQIACHYFRVLVRILKQN 760
>UniRef50_Q2GRW7 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 680
Score = 36.3 bits (80), Expect = 0.74
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +2
Query: 125 EDSDGSGQGAEPEEFQDSGEDW--TPDADSNEPASRTSRKR-VSKPPVN 262
E+ + G+G + EE Q+ E W +A+ NE AS+ S VS PP+N
Sbjct: 365 EEEEEDGEGEDDEEVQEVHEKWVGVEEANDNETASQDSDANFVSSPPIN 413
>UniRef50_A2QK66 Cluster: Contig An04c0360, complete genome; n=1;
Aspergillus niger|Rep: Contig An04c0360, complete genome
- Aspergillus niger
Length = 1663
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 395 DGNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIP 571
DG ++D+ F S +VLL S ++W D+V++ + +L WK D K L+ F P
Sbjct: 205 DGQPLAGENARDL---FESATYVLLTSIIRW--DSVLAAVKKLPHWKQDTKLQLETFRP 258
>UniRef50_UPI000069DB80 Cluster: UPI000069DB80 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069DB80 UniRef100 entry -
Xenopus tropicalis
Length = 312
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 122 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 283
EE+++ + EE ++ E+ + ++ E A + V KPP NN +KK+K
Sbjct: 197 EEEAEEEAEEEAEEEAEEEAEE-EAEEEAEEEAEEEADLEVKKPPKNNERKKKK 249
>UniRef50_Q8IQT4 Cluster: CG14073-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG14073-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 2133
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 101 RKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKK 277
++S + D E EE Q+ E+ + D +E + KRV + P N KK+
Sbjct: 1217 QESTSSESDQDDNDNDNDEEEEDQEEDEEEPEEEDDDEEQDKKKEKRVGRRPGNTLKKR 1275
>UniRef50_Q7RM28 Cluster: FK506-binding protein; n=6;
Plasmodium|Rep: FK506-binding protein - Plasmodium
yoelii yoelii
Length = 306
Score = 34.3 bits (75), Expect = 3.0
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 392 SDGNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGK 547
SDG+ DSS+ +DVP FH GN ++K WD K +E ++D K
Sbjct: 53 SDGSIFDSSRQRDVPFKFHLGNGEVIKG---WDICVASMKKNEKCSVRLDSK 101
>UniRef50_Q54QM3 Cluster: PHD Zn finger-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: PHD Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 1678
Score = 34.3 bits (75), Expect = 3.0
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +2
Query: 86 KXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 265
K K+K K++ D D E +D E+ + DS E ++ K +NN
Sbjct: 758 KANHKKKKKKIDSTDEDEDSN----NEKEDENEEDEDEEDSEEEEEEEEEEKEEKEKINN 813
Query: 266 TKKKRKN 286
KKR N
Sbjct: 814 KNKKRNN 820
>UniRef50_A2DP32 Cluster: Putative uncharacterized protein; n=4;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 786
Score = 34.3 bits (75), Expect = 3.0
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 600 LCKTLPFDSIGINFCNNALPSIF-HKFSSSSFDITVSPSHFTSD 472
LC + F IG+N +A+ SIF H+FS+SSFD + FT+D
Sbjct: 615 LCSLVCF--IGLNSAFSAVDSIFGHRFSNSSFDGVFVSTKFTND 656
>UniRef50_A4T1G1 Cluster: PE-PPE, C-terminal domain protein
precursor; n=1; Mycobacterium gilvum PYR-GCK|Rep:
PE-PPE, C-terminal domain protein precursor -
Mycobacterium gilvum PYR-GCK
Length = 396
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 173 DSGEDWTPDADSNEPASRTSRKRVSKPPVNNT 268
D+ E+WTPDAD++ TS +PP +T
Sbjct: 103 DAAEEWTPDADADADVPVTSAANSPEPPARST 134
>UniRef50_Q5KGJ0 Cluster: Replication control protein 1, putative;
n=1; Filobasidiella neoformans|Rep: Replication control
protein 1, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 711
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 74 TIPIKXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKP 253
T+PI + + E SD S G+E ++S D + +S++PA S+KR
Sbjct: 168 TVPISKEEEEHPQEPGLESSDESDDGSEARVEEESDGDEESEEESDDPAESISKKRKRPT 227
Query: 254 PVNNTKKKR 280
T KR
Sbjct: 228 KTAKTYAKR 236
>UniRef50_Q0UZL8 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 367
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 119 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRT 229
NEED G EP++ QDS ED T D + ++ + T
Sbjct: 181 NEEDDTPRGPDTEPDDEQDSDEDSTSDTEPDKQQNNT 217
>UniRef50_P41848 Cluster: FACT complex subunit SSRP1-A; n=5;
Chromadorea|Rep: FACT complex subunit SSRP1-A -
Caenorhabditis elegans
Length = 697
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +2
Query: 104 KSLKLNEEDSDGS-GQGAEPEEFQDSG-EDWTPDADSNEPASR---TSRKRVSKPPVNNT 268
K +K +ED + S G G+EP++ DSG E + +EP S S++R +P
Sbjct: 475 KDIKKKKEDKESSEGTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRKGEPKEKRE 534
Query: 269 KKKRK 283
KK+++
Sbjct: 535 KKEKR 539
>UniRef50_UPI00015A3EDA Cluster: UPI00015A3EDA related cluster; n=1;
Danio rerio|Rep: UPI00015A3EDA UniRef100 entry - Danio
rerio
Length = 186
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 125 EDSDGSGQ-GAEPEEFQDSGEDWTPDADSNEPASRTSRKRVS 247
E S GSGQ G E EE +D TP+ S+EP R +S
Sbjct: 67 EPSGGSGQEGGEEEEVEDMDSSETPEPTSSEPPEHRGRLSLS 108
>UniRef50_Q4S0X4 Cluster: Chromosome 5 SCAF14773, whole genome shotgun
sequence; n=3; Euteleostomi|Rep: Chromosome 5 SCAF14773,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1649
Score = 33.5 bits (73), Expect = 5.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 527 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSXEI 703
+WK+ KALLQKF+P +G+ + T Y G+ D + Y + + LD + + +
Sbjct: 1311 VWKVQ-KALLQKFVPELRDGKRVFSATNSYLGYFGDAKAMYQRVYVKFLDTVNKREYVRL 1369
Query: 704 C 706
C
Sbjct: 1370 C 1370
>UniRef50_Q0AQ49 Cluster: Ribonuclease, Rne/Rng family; n=2;
Alphaproteobacteria|Rep: Ribonuclease, Rne/Rng family -
Maricaulis maris (strain MCS10)
Length = 890
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 125 EDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 283
ED+DG G+ PE D ED D S++ A+R R+ K + K+R+
Sbjct: 120 EDADGEGEAEAPETIGDDSED---DDISDQQAARRRRQMFRKYKIQEVIKRRQ 169
>UniRef50_A1A388 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis ATCC 15703|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
(strain ATCC 15703 / DSM 20083)
Length = 657
Score = 33.5 bits (73), Expect = 5.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 173 DSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRKN 286
D ED PD+ +EP SR R+R+S + K+KR+N
Sbjct: 49 DINED-APDSADSEPHSRRVRRRMSAEHIRRIKRKRRN 85
>UniRef50_Q8IC29 Cluster: Putative uncharacterized protein
MAL7P1.17; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL7P1.17 - Plasmodium
falciparum (isolate 3D7)
Length = 3535
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 630 TFHPEYTHVHLCKTLPFDSIGINFCNNALPSIFHKFSSSSFDITVSPSHFTSDFSKT 460
+FH ++T+V+ + +I N CNN ++F K SS + FT D S +
Sbjct: 687 SFHHKHTNVNHINYHTYKNINTNVCNNTNNNLFSKKKSSDDFVLYINEEFTEDSSSS 743
>UniRef50_Q6C5Q3 Cluster: Similar to sp|O74161 Candida albicans
Chitin biosynthesis protein CHS5; n=1; Yarrowia
lipolytica|Rep: Similar to sp|O74161 Candida albicans
Chitin biosynthesis protein CHS5 - Yarrowia lipolytica
(Candida lipolytica)
Length = 568
Score = 33.5 bits (73), Expect = 5.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 122 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK 250
E+D DG G E EE D ED P A S + + ++K+ K
Sbjct: 526 EDDDDGDEDGDEEEEVDDKQEDSKPAAASGKKNKKKNKKKGKK 568
>UniRef50_UPI0000584AAA Cluster: PREDICTED: similar to MGC69335
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC69335 protein -
Strongylocentrotus purpuratus
Length = 286
Score = 33.1 bits (72), Expect = 6.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 122 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRKN 286
E+DSD + + E + + SG + +ADS E R ++R K KKK+K+
Sbjct: 15 EDDSDAAAEQEEAGQEEGSGSSGS-EADSEEEKRRKRKERKRKRRAKEKKKKKKS 68
>UniRef50_UPI0000583DC9 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 285
Score = 33.1 bits (72), Expect = 6.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 122 EEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNT 268
EED DG Q E +E ++ E+ + D + ASR SR S P N++
Sbjct: 118 EEDEDGEDQDEEEDEDREDPEE--EEEDELDEASRFSRSSSSNSPTNSS 164
>UniRef50_Q9VQK7 Cluster: CG3605-PA; n=5; Endopterygota|Rep:
CG3605-PA - Drosophila melanogaster (Fruit fly)
Length = 749
Score = 33.1 bits (72), Expect = 6.9
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 116 LNEEDSDGSGQGAEPEEFQDSGEDWTPDADS--NEPASRTSRKRVSKPPVNNTKKKRK 283
++ + GSG + + D GED DAD+ N AS+ + K+ SK N KKKRK
Sbjct: 82 VDADSQGGSGGATQDGDEADVGEDSEEDADNQVNGSASQKTGKQ-SKAERNKKKKKRK 138
>UniRef50_Q554A7 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 659
Score = 33.1 bits (72), Expect = 6.9
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 98 KRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKK 277
KRK+ K N E SG E E+ ED D D ++ + S K+ S NN+ K
Sbjct: 71 KRKNKKKNNEIDSSSGSDDE-SEYSSEEEDENEDEDEDKMKRKKSNKKKSDED-NNSGSK 128
Query: 278 RKN 286
R++
Sbjct: 129 RRS 131
>UniRef50_A5K579 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2784
Score = 33.1 bits (72), Expect = 6.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 119 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRKN 286
++ED G + E+ D GED D D ++ T+ +S V KKK+KN
Sbjct: 123 DDEDEADDEDGEDGEDDDDDGEDGEDDDDDDDDDDETNSSELSDFSVKK-KKKKKN 177
>UniRef50_Q4VXL5 Cluster: Transforming, acidic coiled-coil
containing protein 2; n=3; Homo/Pan/Gorilla group|Rep:
Transforming, acidic coiled-coil containing protein 2 -
Homo sapiens (Human)
Length = 832
Score = 33.1 bits (72), Expect = 6.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 74 TIPIKXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSR-KRVSK 250
++PI +SL L D DG+ PE PDA S +S +S KR K
Sbjct: 10 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 64
Query: 251 PPVNNTKKKR 280
P + KKK+
Sbjct: 65 PRPPSLKKKQ 74
>UniRef50_A3CXW5 Cluster: Putative uncharacterized protein; n=1;
Methanoculleus marisnigri JR1|Rep: Putative
uncharacterized protein - Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1)
Length = 209
Score = 33.1 bits (72), Expect = 6.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 71 RTIPIKXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK 250
RTI + +K++K+ E ++ SG+G P+E + + A EPA R
Sbjct: 46 RTIGRARLFPQKAVKIVRELAELSGRGLSPDEIAEEVKSGRKPAAPEEPAEEFDRDAAPL 105
Query: 251 PP 256
PP
Sbjct: 106 PP 107
>UniRef50_O95359 Cluster: Transforming acidic coiled-coil-containing
protein 2; n=15; Eutheria|Rep: Transforming acidic
coiled-coil-containing protein 2 - Homo sapiens (Human)
Length = 2948
Score = 33.1 bits (72), Expect = 6.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 74 TIPIKXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSR-KRVSK 250
++PI +SL L D DG+ PE PDA S +S +S KR K
Sbjct: 2075 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 2129
Query: 251 PPVNNTKKKR 280
P + KKK+
Sbjct: 2130 PRPPSLKKKQ 2139
>UniRef50_P38630 Cluster: Replication factor C subunit 1; n=11;
Saccharomycetales|Rep: Replication factor C subunit 1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 861
Score = 33.1 bits (72), Expect = 6.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 128 DSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKKRK 283
D+D + A+ EE QDS D D + A T RK + P + K+K K
Sbjct: 809 DADDNPVPADDEETQDSSTDLKKDKLIKQKAKPTKRKTATSKPGGSKKRKTK 860
>UniRef50_Q66IN2 Cluster: Glutamine and serine-rich protein 1; n=3;
Xenopus|Rep: Glutamine and serine-rich protein 1 -
Xenopus laevis (African clawed frog)
Length = 1673
Score = 33.1 bits (72), Expect = 6.9
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 458 FVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDN 637
FV+ D++ + + + + +WK+ KALLQKFIP +G+ T Y G+ D
Sbjct: 1303 FVVKIEDIELLKEALCTGKEPPAIWKVQ-KALLQKFIPEIKDGQRSFAATNSYLGYFGDA 1361
Query: 638 RDNY 649
+ Y
Sbjct: 1362 KTKY 1365
>UniRef50_UPI0001552ABE Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 211
Score = 32.7 bits (71), Expect = 9.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 113 KLNEEDSDGSGQGAEPEE-----FQDSGEDWTPDADSNEPASRTSRKRVSKPPVNNTKKK 277
K EED + G+G E EE ++ G + D D E R +R SK ++K
Sbjct: 111 KGGEEDEEAKGEGEEKEEEEEKKVKERGREEEEDEDEKEEKEREKERRRSKQKEKEEEEK 170
Query: 278 RK 283
+K
Sbjct: 171 KK 172
>UniRef50_UPI00015529DA Cluster: PREDICTED: hypothetical protein;
n=5; Murinae|Rep: PREDICTED: hypothetical protein - Mus
musculus
Length = 154
Score = 32.7 bits (71), Expect = 9.1
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 86 KXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPPVNN 265
K K+K K EE+ + + E EE ++ E+ + + + + +K+ K
Sbjct: 45 KKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKEKKKKKKKKKKKKKKKKKKKK 104
Query: 266 TKKKRK 283
KKK+K
Sbjct: 105 KKKKKK 110
>UniRef50_UPI00006CBA50 Cluster: hypothetical protein
TTHERM_00499460; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00499460 - Tetrahymena
thermophila SB210
Length = 448
Score = 32.7 bits (71), Expect = 9.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 119 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSK 250
+EED D SG G+E ++ D + DS+ +S+ +K K
Sbjct: 56 DEEDEDQSGSGSEKDDEDDGDSEKQSGEDSDSDSSKKKKKNTKK 99
>UniRef50_UPI000023F3B2 Cluster: hypothetical protein FG08481.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08481.1 - Gibberella zeae PH-1
Length = 1105
Score = 32.7 bits (71), Expect = 9.1
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 80 PIKXMXKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPA----SRTSRKRVS 247
P + + KRKS L + + S + +F D+ + T S EP SRT R +V+
Sbjct: 323 PPRTLRKRKSSSLEGDGNVISLRKRRRNQFNDAASEGTARNGSAEPGRHNPSRTLRLKVT 382
Query: 248 KPPVNNTKK 274
+PP + KK
Sbjct: 383 RPPPVSIKK 391
>UniRef50_UPI000023F047 Cluster: hypothetical protein FG07139.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07139.1 - Gibberella zeae PH-1
Length = 1172
Score = 32.7 bits (71), Expect = 9.1
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 98 KRKSLKLNEEDSDGSGQGAEPE-EFQDSGEDWT--PDADSNE--PASRTSRKRVSK 250
KRK ++ED DG + A E E DS E+ + PD DS+E PA R SRK+ S+
Sbjct: 41 KRKRDDQDDEDDDGEEEEAAAENEAPDSDEEMSDEPDNDSDEDHPAPR-SRKKASQ 95
>UniRef50_Q54XM9 Cluster: Transcription initiation factor TFIID
subunit; n=1; Dictyostelium discoideum AX4|Rep:
Transcription initiation factor TFIID subunit -
Dictyostelium discoideum AX4
Length = 450
Score = 32.7 bits (71), Expect = 9.1
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 101 RKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPAS 223
R L+ +++D DGSG G++ + +DS + + ++DS++ S
Sbjct: 262 RGRLQSDDDDEDGSGSGSDEDSDEDSDDSDSDESDSDDSDS 302
>UniRef50_Q4UG52 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 523
Score = 32.7 bits (71), Expect = 9.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 137 GSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKP 253
G+ G EEF EDW D D+++ R R+R+SKP
Sbjct: 111 GANLGMTNEEFDKLIEDWAEDLDTSQKGPR--RRRLSKP 147
>UniRef50_Q8SWH0 Cluster: Putative uncharacterized protein
ECU02_0120; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU02_0120 - Encephalitozoon
cuniculi
Length = 613
Score = 32.7 bits (71), Expect = 9.1
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 428 DVPKHFHSGNFVLLKSDVKWDGDTVISKLDEL-NLWKIDGKALLQKFIPMESNGRVLHKC 604
+V + F G ++ S W+G +V+ + + N+WK DG+AL K I GR+LHK
Sbjct: 540 NVTEVFVDGETIVTSS--LWEGVSVLRRYKKNGNIWKKDGEALADKGI-----GRILHKN 592
Query: 605 T 607
T
Sbjct: 593 T 593
>UniRef50_Q7ZA72 Cluster: Related to multidrug resistant protein;
n=1; Ustilago maydis|Rep: Related to multidrug resistant
protein - Ustilago maydis (Smut fungus)
Length = 593
Score = 32.7 bits (71), Expect = 9.1
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 645 LSRLSTFHPEYTHVHLCKTLPFDSIGINFCNNALPSIFHKFSSSSFDITVS 493
LS + +P Y HLC T+ F +G+ F NNA I +F +F T S
Sbjct: 203 LSEVFGRNPMYIVCHLCYTVLF--VGLGFANNAATVIILRFLQGAFGSTGS 251
>UniRef50_Q2KHR3 Cluster: Glutamine and serine-rich protein 1; n=33;
Amniota|Rep: Glutamine and serine-rich protein 1 - Homo
sapiens (Human)
Length = 1735
Score = 32.7 bits (71), Expect = 9.1
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 458 FVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDN 637
FV+ D++ + + + + +WK+ KALLQKF+P +G+ T Y G+ D
Sbjct: 1360 FVVKIEDIETFKEALKTGKEPPAIWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDA 1418
Query: 638 RDNYYPI-TEILDRNPRTDSXEIC 706
+ Y I + ++ + + +C
Sbjct: 1419 KSKYKRIYVKFIENANKKEYVRVC 1442
>UniRef50_Q61771 Cluster: Kinesin-like protein KIF3B; n=20;
Euteleostomi|Rep: Kinesin-like protein KIF3B - Mus
musculus (Mouse)
Length = 747
Score = 32.7 bits (71), Expect = 9.1
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 20 PKVKSD*RGSVSLSYFSRTIPIKXMXKRKSL---KLNEEDSDGSGQGAEPEEFQDSGEDW 190
P+V D + ++ + +K +++S+ K E+ +G G G EE ++ GE+
Sbjct: 344 PRVNEDPKDALLREFQEEIARLKAQLEKRSIGRRKRREKRREGGGSGGGGEEEEEEGEEG 403
Query: 191 TPDADSNEPASRTSRKRV 244
D D + R ++++
Sbjct: 404 EEDGDDKDDYWREQQEKL 421
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,467,539
Number of Sequences: 1657284
Number of extensions: 12374764
Number of successful extensions: 45307
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 42145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45112
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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