Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P23
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.8  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 533 STSSVHQVLILQYLHP 486
           S SS H VLI Q LHP
Sbjct: 56  SPSSAHTVLIPQPLHP 71


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 167 ILLVQRPALTHPNLLRLTL 111
           + L Q PAL+ PNLL L+L
Sbjct: 455 VSLSQVPALSTPNLLSLSL 473


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +2

Query: 68  SRTIPIKXMXKRKSLKL-----NEEDSDGSGQGAEPEEFQDSGEDWTPD 199
           SRT P     +   L+L     +E+D    GQG+     +D  ++ T D
Sbjct: 159 SRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEETGD 207


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +2

Query: 68  SRTIPIKXMXKRKSLKL-----NEEDSDGSGQGAEPEEFQDSGEDWTPD 199
           SRT P     +   L+L     +E+D    GQG+     +D  ++ T D
Sbjct: 159 SRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEETGD 207


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +2

Query: 68  SRTIPIKXMXKRKSLKL-----NEEDSDGSGQGAEPEEFQDSGEDWTPD 199
           SRT P     +   L+L     +E+D    GQG+     +D  ++ T D
Sbjct: 159 SRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEETGD 207


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/42 (21%), Positives = 16/42 (38%)
 Frame = +2

Query: 131 SDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 256
           S  S  G++P +       W P+  ++     T+      PP
Sbjct: 417 STPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPP 458


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 560 SVIMLCHQFSTSSVHQ 513
           +VI+ CH  S   VHQ
Sbjct: 170 NVILACHMLSFLMVHQ 185


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 560 SVIMLCHQFSTSSVHQVLILQYLHPILH 477
           +++  CH  S SS HQ ++  + +P+ H
Sbjct: 329 AMVNRCHPLSLSSDHQAML--HHNPMSH 354


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/26 (23%), Positives = 13/26 (50%)
 Frame = +3

Query: 534 KLMAKHYYRNLSQWNQMEEFYTNVHV 611
           + M  H++  L  W+Q+   +  + V
Sbjct: 85  RFMKYHFFGTLKLWSQLFSTFAGIEV 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,244
Number of Sequences: 336
Number of extensions: 3329
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)