Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_P21
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 328 1e-88
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 297 2e-79
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 272 8e-72
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 267 2e-70
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 254 1e-66
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 240 3e-62
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 236 4e-61
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 227 2e-58
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 224 2e-57
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 217 2e-55
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 216 5e-55
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 214 2e-54
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 210 4e-53
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 200 3e-50
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 195 8e-49
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 187 2e-46
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 185 9e-46
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 183 4e-45
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 183 5e-45
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 182 1e-44
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 180 2e-44
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 176 5e-43
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 175 1e-42
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 173 4e-42
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 173 5e-42
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 171 2e-41
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 171 2e-41
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 170 4e-41
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 169 5e-41
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 168 1e-40
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 167 2e-40
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 166 4e-40
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 165 1e-39
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 163 3e-39
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 163 3e-39
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 163 4e-39
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 162 7e-39
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 162 7e-39
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 162 9e-39
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 161 1e-38
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 161 1e-38
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 161 2e-38
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 161 2e-38
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 160 4e-38
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 160 4e-38
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 159 5e-38
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 159 5e-38
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 158 1e-37
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 158 1e-37
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 157 3e-37
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 157 3e-37
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 157 3e-37
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 157 4e-37
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 156 5e-37
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 156 5e-37
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 156 5e-37
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 156 6e-37
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 155 8e-37
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 155 8e-37
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 155 1e-36
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 155 1e-36
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 155 1e-36
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 155 1e-36
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 155 1e-36
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 155 1e-36
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 155 1e-36
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 154 2e-36
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 154 2e-36
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 154 2e-36
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 153 3e-36
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 153 6e-36
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 152 8e-36
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 152 8e-36
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 152 8e-36
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 152 1e-35
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 152 1e-35
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 151 1e-35
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 151 1e-35
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 151 1e-35
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 151 2e-35
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 151 2e-35
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 151 2e-35
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 150 3e-35
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 150 4e-35
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 150 4e-35
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 150 4e-35
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 149 5e-35
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 149 9e-35
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 149 9e-35
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 149 9e-35
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 148 1e-34
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 148 1e-34
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 148 2e-34
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 148 2e-34
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 148 2e-34
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 147 2e-34
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 147 2e-34
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 147 2e-34
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 147 3e-34
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 147 3e-34
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 146 4e-34
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 146 5e-34
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 146 5e-34
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 146 5e-34
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 146 5e-34
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 146 5e-34
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 146 5e-34
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 146 7e-34
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 145 9e-34
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 145 9e-34
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 145 9e-34
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 145 1e-33
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 145 1e-33
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 144 2e-33
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 144 2e-33
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 144 2e-33
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 144 2e-33
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 144 2e-33
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 144 2e-33
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 144 2e-33
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 144 3e-33
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 144 3e-33
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 144 3e-33
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 144 3e-33
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 143 3e-33
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 143 3e-33
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 143 3e-33
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 143 3e-33
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 143 3e-33
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 143 3e-33
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 143 3e-33
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 143 3e-33
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 143 5e-33
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 143 5e-33
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 143 5e-33
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 143 5e-33
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 143 5e-33
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 143 5e-33
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 143 5e-33
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 143 5e-33
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 142 6e-33
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 142 6e-33
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 142 6e-33
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 142 8e-33
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 142 8e-33
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 142 8e-33
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 142 8e-33
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 142 8e-33
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 142 1e-32
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 142 1e-32
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 142 1e-32
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 142 1e-32
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 141 1e-32
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 141 1e-32
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 141 1e-32
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 141 1e-32
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 141 1e-32
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 141 1e-32
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 141 2e-32
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 141 2e-32
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 140 2e-32
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 140 2e-32
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 140 2e-32
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 140 2e-32
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 140 3e-32
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 140 3e-32
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 140 3e-32
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 140 4e-32
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 140 4e-32
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 140 4e-32
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 140 4e-32
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 140 4e-32
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 140 4e-32
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 139 6e-32
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 139 6e-32
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 139 6e-32
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 139 8e-32
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 139 8e-32
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 139 8e-32
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 139 8e-32
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 138 1e-31
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 138 1e-31
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 138 1e-31
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 138 1e-31
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 138 1e-31
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 138 1e-31
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 138 1e-31
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 138 1e-31
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 138 1e-31
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 138 1e-31
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 138 1e-31
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 138 1e-31
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 138 1e-31
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 138 1e-31
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 138 1e-31
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 138 1e-31
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 138 1e-31
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 138 1e-31
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 138 1e-31
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 138 1e-31
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 138 2e-31
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 138 2e-31
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 138 2e-31
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 138 2e-31
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 138 2e-31
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 138 2e-31
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 138 2e-31
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 138 2e-31
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 137 2e-31
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 137 2e-31
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 137 2e-31
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 137 2e-31
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 137 2e-31
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 137 2e-31
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 137 3e-31
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 137 3e-31
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 137 3e-31
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 137 3e-31
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 137 3e-31
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 137 3e-31
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 137 3e-31
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 136 4e-31
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 136 4e-31
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 136 4e-31
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 136 4e-31
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 136 4e-31
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 136 5e-31
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 136 5e-31
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 136 5e-31
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 136 5e-31
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 136 5e-31
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 136 5e-31
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 136 5e-31
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 136 7e-31
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 136 7e-31
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 135 9e-31
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 135 9e-31
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 135 9e-31
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 135 9e-31
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 135 9e-31
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 135 1e-30
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 135 1e-30
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 135 1e-30
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 135 1e-30
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 135 1e-30
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 135 1e-30
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 135 1e-30
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 135 1e-30
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 134 2e-30
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 134 2e-30
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 134 2e-30
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 134 2e-30
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 134 2e-30
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 134 2e-30
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 134 2e-30
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 134 2e-30
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 134 2e-30
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 134 2e-30
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 134 3e-30
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 134 3e-30
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 134 3e-30
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 133 4e-30
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 133 4e-30
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 133 4e-30
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 133 4e-30
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 133 4e-30
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 133 4e-30
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 133 4e-30
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 133 5e-30
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 133 5e-30
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 132 7e-30
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 132 7e-30
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 132 7e-30
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 132 7e-30
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 132 7e-30
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 132 7e-30
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 132 7e-30
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 132 7e-30
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 132 7e-30
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 132 7e-30
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 132 9e-30
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 132 9e-30
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 132 9e-30
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 132 9e-30
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 132 1e-29
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 132 1e-29
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 132 1e-29
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 132 1e-29
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 132 1e-29
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 132 1e-29
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 132 1e-29
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 132 1e-29
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 131 2e-29
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 131 2e-29
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 131 2e-29
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 131 2e-29
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 131 2e-29
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 131 2e-29
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 131 2e-29
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 131 2e-29
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 130 3e-29
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 130 3e-29
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 130 3e-29
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 130 3e-29
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 130 3e-29
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 130 3e-29
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 130 3e-29
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 130 3e-29
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 130 3e-29
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 130 3e-29
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 130 3e-29
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 130 3e-29
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 130 3e-29
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 130 3e-29
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 130 5e-29
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 130 5e-29
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 130 5e-29
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 130 5e-29
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 130 5e-29
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 130 5e-29
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 130 5e-29
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 130 5e-29
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 129 6e-29
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 129 6e-29
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 129 6e-29
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 129 6e-29
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 129 8e-29
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 129 8e-29
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 129 8e-29
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 129 8e-29
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 129 8e-29
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 128 1e-28
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 128 1e-28
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 128 1e-28
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 128 1e-28
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 128 1e-28
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 128 1e-28
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 128 1e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 128 1e-28
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 128 1e-28
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 128 1e-28
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 128 2e-28
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 128 2e-28
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 128 2e-28
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 128 2e-28
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 128 2e-28
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 128 2e-28
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 127 2e-28
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 127 2e-28
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 127 2e-28
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 127 2e-28
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 127 2e-28
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 127 2e-28
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 127 2e-28
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 127 2e-28
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 127 2e-28
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 127 3e-28
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 127 3e-28
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 126 4e-28
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 126 4e-28
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 126 4e-28
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 126 4e-28
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 126 4e-28
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 126 4e-28
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 126 6e-28
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 126 6e-28
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 126 6e-28
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 126 6e-28
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 126 6e-28
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 126 7e-28
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 126 7e-28
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 126 7e-28
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 125 1e-27
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 125 1e-27
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 125 1e-27
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 125 1e-27
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 125 1e-27
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 125 1e-27
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 125 1e-27
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 125 1e-27
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 125 1e-27
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 125 1e-27
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 125 1e-27
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 125 1e-27
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 125 1e-27
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 125 1e-27
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 125 1e-27
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 125 1e-27
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 124 2e-27
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 124 2e-27
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 124 2e-27
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 124 2e-27
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 124 2e-27
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 124 2e-27
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 124 2e-27
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 124 2e-27
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 124 2e-27
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 124 2e-27
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 124 2e-27
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 124 2e-27
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 124 3e-27
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 124 3e-27
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 124 3e-27
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 124 3e-27
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 124 3e-27
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 124 3e-27
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 124 3e-27
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 124 3e-27
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 124 3e-27
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 123 4e-27
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 123 4e-27
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 123 4e-27
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 123 4e-27
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 123 4e-27
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 123 4e-27
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 123 4e-27
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 123 4e-27
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 123 4e-27
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 123 4e-27
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 123 5e-27
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 123 5e-27
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 123 5e-27
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 123 5e-27
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 122 7e-27
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 122 7e-27
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 7e-27
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 122 7e-27
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 122 7e-27
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 122 7e-27
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 122 9e-27
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 9e-27
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 122 9e-27
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 122 9e-27
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 122 9e-27
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 122 9e-27
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 122 9e-27
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 122 9e-27
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 122 1e-26
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 122 1e-26
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 122 1e-26
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 122 1e-26
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 122 1e-26
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 122 1e-26
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 121 2e-26
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 121 2e-26
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 121 2e-26
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 121 2e-26
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 121 2e-26
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 121 2e-26
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 121 2e-26
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 121 2e-26
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 121 2e-26
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 120 3e-26
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 120 3e-26
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 120 3e-26
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 120 3e-26
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 120 4e-26
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 120 4e-26
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 120 4e-26
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 120 4e-26
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 120 4e-26
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 120 5e-26
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 119 6e-26
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 119 6e-26
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 119 6e-26
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 119 6e-26
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 119 6e-26
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 119 6e-26
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 119 6e-26
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 119 9e-26
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 119 9e-26
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 119 9e-26
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 118 1e-25
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 118 1e-25
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 118 1e-25
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 118 1e-25
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 118 1e-25
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 118 1e-25
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 118 1e-25
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 118 1e-25
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 118 2e-25
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 118 2e-25
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 118 2e-25
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 118 2e-25
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 118 2e-25
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 118 2e-25
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 118 2e-25
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 118 2e-25
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 118 2e-25
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 118 2e-25
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 118 2e-25
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 118 2e-25
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 117 3e-25
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 117 3e-25
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 117 3e-25
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 117 3e-25
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 328 bits (805), Expect = 1e-88
Identities = 160/208 (76%), Positives = 181/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 117 EVEQTPTENVTEDTEDDKI-TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 293
E +PTE E+++ TFKDLGV DVLCEAC++L W KP+KIQ EAIP+AL G+DI
Sbjct: 5 EEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 294 IGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCA 473
IGLAETGSGKTGAFALPIL ALLE PQR FAL+LTPTRELAFQISEQFEALG+SIGV+ A
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSA 124
Query: 474 VIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDF 653
VIVGG+D ++Q+L L+KKPHIIIATPGRL+DHLENTKGFNLR LKYLVMDEADRILNMDF
Sbjct: 125 VIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDF 184
Query: 654 EVEVDKILRAIPRERHTYLFSATMTXKV 737
E EVDKIL+ IPR+R T+LFSATMT KV
Sbjct: 185 ETEVDKILKVIPRDRKTFLFSATMTKKV 212
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 297 bits (729), Expect = 2e-79
Identities = 142/174 (81%), Positives = 159/174 (91%)
Frame = +3
Query: 159 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 338
E++ TFKDLGV DVLCEAC++L W KP+KIQ EAIP+AL G+DIIGLAETGSGKTGAFA
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 339 LPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
LPIL ALLE PQR FAL+LTPTRELAFQISEQFEALG+SIGV+ AVIVGG+D ++Q+L L
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 128
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILR 680
+KKPHIIIATPGRL+DHLENTKGFNLR LKYLVMDEADRILNMDFE EVDKIL+
Sbjct: 129 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 182
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 272 bits (666), Expect = 8e-72
Identities = 123/196 (62%), Positives = 161/196 (82%)
Frame = +3
Query: 150 EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 329
+D +DD TF+DLGV LC AC+EL WK+P+KIQ EAIP+AL GKDIIGLAETGSGKT
Sbjct: 34 DDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTA 93
Query: 330 AFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 509
AF +PILQ LLE PQR F+LIL PTREL+ QI EQ +LG+ IG+ +I+GG+DMV+QA
Sbjct: 94 AFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQA 153
Query: 510 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP 689
L LSKKPHII+ +PGR+ DHL+NTKGF+L +KYLV+DEAD++L+ DF+ ++KI+ ++P
Sbjct: 154 LQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSLP 213
Query: 690 RERHTYLFSATMTXKV 737
+++ TYL+SATMT K+
Sbjct: 214 KDKVTYLYSATMTSKI 229
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 267 bits (655), Expect = 2e-70
Identities = 126/208 (60%), Positives = 165/208 (79%)
Frame = +3
Query: 114 SEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 293
++ EQ + T + K+ F DLGV+ + EAC + +K P+ IQ +AIP AL +D+
Sbjct: 85 ADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDV 144
Query: 294 IGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCA 473
IGLA+TGSGKT AF +PILQAL +NP+ +FA +L PTRELA+QIS+Q EALG++IGV+ A
Sbjct: 145 IGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSA 204
Query: 474 VIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDF 653
IVGGMDM++Q++ LSK+PH+I+ATPGRL DHLENTKGF+LR L+YLVMDEADR+L+MDF
Sbjct: 205 TIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDF 264
Query: 654 EVEVDKILRAIPRERHTYLFSATMTXKV 737
+DK+L++IPRER T LFSATMT KV
Sbjct: 265 GPIIDKLLQSIPRERRTMLFSATMTTKV 292
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 254 bits (623), Expect = 1e-66
Identities = 125/200 (62%), Positives = 157/200 (78%), Gaps = 12/200 (6%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF +LGV + L +ACE L WK PSKIQ EA+P AL GKD+IGLA+TGSGKTGAFA+PILQ
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 354 ALLE-----NPQR-------YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDM 497
ALLE P++ +FA +L+PTRELA QI+EQFEALGA I ++CAV+VGG+D
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 498 VAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKIL 677
+ Q + L K+PH+I+ATPGRL DH+ +TKGF+L+ LKYLV+DEADR+LN DFE +++IL
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 678 RAIPRERHTYLFSATMTXKV 737
IP ER T+LFSATMT KV
Sbjct: 190 EEIPLERKTFLFSATMTKKV 209
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 240 bits (587), Expect = 3e-62
Identities = 121/204 (59%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Frame = +3
Query: 129 TPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAE 308
T EN ED + +F +L +V L +AC+ L + KP+ IQ +AIP AL G DIIGLA+
Sbjct: 69 TQNENTNEDESFE--SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQ 126
Query: 309 TGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
TGSGKT AFA+PIL L + + Y+A IL PTRELA QI E F++LG+ +GV+ IVGG
Sbjct: 127 TGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGG 186
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
M+M+ QA L +KPHIIIATPGRL+DHLENTKGF+LR LK+LVMDEADR+L+M+F +D
Sbjct: 187 MNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLD 246
Query: 669 KILRAIP-RERHTYLFSATMTXKV 737
+IL+ IP +ER TYLFSATMT K+
Sbjct: 247 RILKIIPTQERTTYLFSATMTSKI 270
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 236 bits (578), Expect = 4e-61
Identities = 109/220 (49%), Positives = 160/220 (72%), Gaps = 2/220 (0%)
Frame = +3
Query: 84 KAMESATNQXSEVEQTPTENVT--EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQK 257
K +++ + +V+ +N+ E+ E +TF+DL + + + E+ +EL WKKP++IQ+
Sbjct: 125 KNHDNSFHNNDDVKNGEVKNLVTNEEREKQNVTFEDLNICEEILESIKELGWKKPTEIQR 184
Query: 258 EAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQF 437
E +P A L KDIIGL+ETGSGKT F +PILQ L N Q ++AL+++PTREL QIS+ F
Sbjct: 185 EILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNF 244
Query: 438 EALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
+ALG ++ + I GG+D+V Q+L L+KKP++I++TPGR++DHL NTKGFNL+ LKYLV
Sbjct: 245 QALGMNLLINICTIYGGVDIVTQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLV 304
Query: 618 MDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
DEAD++L+ DFE ++K+L +P R T+LFSATMT V
Sbjct: 305 FDEADKLLSQDFESSINKLLLILPPNRITFLFSATMTKNV 344
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 227 bits (555), Expect = 2e-58
Identities = 106/189 (56%), Positives = 147/189 (77%), Gaps = 1/189 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F + +V L E+ + LK+ +P+ IQ AIP AL GKDI+G+AETGSGKT AFA+PILQ
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L Q Y+AL+L PTRELAFQI E F+ALG+S+G++ I+GGM M+ QA L +KPH
Sbjct: 159 TLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPH 218
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP-RERHTYL 710
+IIATPGRL+DHLE+TKGF+L+ L+YLVMDE DR++++D+ +D+IL+ IP +R TYL
Sbjct: 219 VIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRITYL 278
Query: 711 FSATMTXKV 737
++ATM+ ++
Sbjct: 279 YTATMSREI 287
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 224 bits (548), Expect = 2e-57
Identities = 105/190 (55%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF LG+ LC + L WK P+ IQ E +P AL G+DII LAETGSGKT AF LPILQ
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
LL+ QR++ALIL PTREL QIS+Q A+G ++GV +VGG+D QA+ L+KKPH
Sbjct: 112 RLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPH 171
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI--PRERHTY 707
+++ +PGR+VDHL+ TKGF+L+ +K LV+DEADR+L++DF+ + +L + P ER T
Sbjct: 172 VVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQTM 231
Query: 708 LFSATMTXKV 737
LFSATMT KV
Sbjct: 232 LFSATMTTKV 241
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 217 bits (531), Expect = 2e-55
Identities = 104/187 (55%), Positives = 137/187 (73%), Gaps = 3/187 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F +LG+ L E C +L K+P+ +Q IP L G+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L E+P F L+LTPTRELA+QI+EQF LG +G+K +IVGGMDMVAQAL LS+KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNM---DFEVEVDKILRAIPRERHTY 707
+IATPGRL DHL ++ F+++ +++LVMDEADR+L DF V+++ IL A+P R T
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTL 183
Query: 708 LFSATMT 728
LFSAT+T
Sbjct: 184 LFSATLT 190
>UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 454
Score = 216 bits (527), Expect = 5e-55
Identities = 100/168 (59%), Positives = 134/168 (79%)
Frame = +3
Query: 234 KKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTREL 413
+ P+ IQ AIP AL G+D+IGLA TGSGKTGAF +P+L LLE+ QR + ++L P+REL
Sbjct: 53 RHPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQRIYCVVLAPSREL 112
Query: 414 AFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFN 593
QI+EQF AL +SI ++ VI+GG+DMV QA L+K+PH+I+A+PGRL DH+ENTKGF+
Sbjct: 113 CEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTKGFS 172
Query: 594 LRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L +K LV+DEADR+L+ DF+ E+DKI+ A+P ER T+LFSATMT K+
Sbjct: 173 LSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKL 220
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 214 bits (522), Expect = 2e-54
Identities = 103/220 (46%), Positives = 148/220 (67%), Gaps = 2/220 (0%)
Frame = +3
Query: 84 KAMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEA 263
+A A + S Q+ + +D E TF+DLG+ LC AC + W+ P++IQ
Sbjct: 24 RASMRAPSTSSVKHQSLGSELLDDEEFKAKTFQDLGLCQELCAACADAGWQHPTRIQAST 83
Query: 264 IPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF--ALILTPTRELAFQISEQF 437
I V G+D+IG+A+TGSGKTGA+ALP++ LL + + L++ PTRELA Q++ QF
Sbjct: 84 ITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQRKTPYLSVLVMVPTRELAQQVTAQF 143
Query: 438 EALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
LG S+G++ A +VGG DMV QA LSK+PH+++ TPGR+ DHL NTKGF L L LV
Sbjct: 144 VLLGRSVGLRVATLVGGADMVEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALV 203
Query: 618 MDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+DEAD++L+M++E E+D IL +P+ R T LFSAT++ K+
Sbjct: 204 LDEADKMLDMNYEKEIDAILEQLPQNRRTMLFSATLSTKI 243
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 210 bits (512), Expect = 4e-53
Identities = 104/187 (55%), Positives = 133/187 (71%), Gaps = 2/187 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF++LG+ L C++L +K PS IQ IP L G+DII A+TGSGKT +FA+PIL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L E+P FA+ILTPTRELA QI EQF A+GA + V C+V++GG+D V QAL+L K+PH
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI--PRERHTY 707
II+ATPGRL HL N L+ K+LV+DEADR+L DFE+E+ IL + P +R T
Sbjct: 125 IIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQTL 184
Query: 708 LFSATMT 728
LFSATMT
Sbjct: 185 LFSATMT 191
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 200 bits (488), Expect = 3e-50
Identities = 95/183 (51%), Positives = 131/183 (71%), Gaps = 3/183 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F LG+ L E C++L ++P+ +Q+ +P L G+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPILQK 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L E+P F L+LTPTRELA+QI+EQF LG +G+K ++VGGMDMV QAL LS+KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALDLSRKPHV 123
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNM---DFEVEVDKILRAIPRERHTY 707
+IATPGRL DHL ++ F+++ +++LVMDEADR+L +F ++ IL A+P R T
Sbjct: 124 VIATPGRLADHLRSSSTFSIKKIRFLVMDEADRLLEQGCSEFTKDLKVILGAVPDLRQTL 183
Query: 708 LFS 716
LFS
Sbjct: 184 LFS 186
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 195 bits (476), Expect = 8e-49
Identities = 93/202 (46%), Positives = 148/202 (73%), Gaps = 6/202 (2%)
Frame = +3
Query: 150 EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 329
++T + TFKDLG++ + + E L +KKP++IQ+ +IPVAL KDIIG+A+TGSGKT
Sbjct: 2 DNTTPKQKTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTA 61
Query: 330 AFALPILQALL---ENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDM 497
+F LP++Q LL E + ++ +I+ PTRELA Q+ E + +G ++ G+ ++VGGMD+
Sbjct: 62 SFLLPMVQHLLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDV 121
Query: 498 VAQALMLSKKPHIIIATPGRLVDHLENTKGF--NLRPLKYLVMDEADRILNMDFEVEVDK 671
+ Q++ L+K+P +I+ TPGR+V H++NTKG ++ +K+LV+DEAD++L MDF E+D
Sbjct: 122 MKQSVQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDY 181
Query: 672 ILRAIPRERHTYLFSATMTXKV 737
++ +P++R T LFSATM+ KV
Sbjct: 182 LIEKLPKQRTTMLFSATMSTKV 203
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 187 bits (456), Expect = 2e-46
Identities = 92/210 (43%), Positives = 138/210 (65%), Gaps = 8/210 (3%)
Frame = +3
Query: 123 EQTPTENVTEDTEDDKI------TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG 284
++ P VTE DD TF +LG+ L + C+ L + P+ +Q+ IP AL G
Sbjct: 55 DEAPAAAVTEHAGDDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEG 114
Query: 285 KDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGV 464
+D++G+AETGSGKT AFALPIL L E+P AL L PTRELA Q++EQF ALGA +G+
Sbjct: 115 RDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGL 174
Query: 465 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRI 638
+C +GG D + QA L+++PH+++ATPGR+ + + K+LV+DEADR+
Sbjct: 175 RCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRV 234
Query: 639 LNMDFEVEVDKILRAIPRERHTYLFSATMT 728
L+++FE ++ I ++P++R T+LFSAT++
Sbjct: 235 LDINFEEDLRVIFGSLPKKRQTFLFSATIS 264
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 185 bits (451), Expect = 9e-46
Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 3/218 (1%)
Frame = +3
Query: 93 ESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPV 272
E+A + + P + + TF +L + L ACE L +KKP+ IQ IP+
Sbjct: 141 EAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPL 200
Query: 273 ALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA---LILTPTRELAFQISEQFEA 443
AL G+D+ A TGSGKT AFALP L+ LL P+R FA LILTPTRELA QI +
Sbjct: 201 ALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQN 260
Query: 444 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMD 623
L +KC +IVGG+ + Q ++L P I++ATPGR++DHL N+ +L L L++D
Sbjct: 261 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILD 320
Query: 624 EADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
EADR+L F E+ +++R P+ R T LFSATMT +V
Sbjct: 321 EADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEV 358
>UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase
superfamily II protein; n=2; Ostreococcus|Rep: Ddx49
Ddx49-related DEAD box helicase superfamily II protein -
Ostreococcus tauri
Length = 419
Score = 183 bits (446), Expect = 4e-45
Identities = 89/191 (46%), Positives = 128/191 (67%), Gaps = 3/191 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF +LG+ +V+ + + + ++ PS +Q IP L GKD+IG+A TGSGKT AFALPI+
Sbjct: 3 TFDELGLCNVVLKILKRVHFRSPSDVQSTCIPQILAGKDVIGIANTGSGKTAAFALPIVD 62
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L +P FAL L+PTRELA QI++QF GA G+ C VI GG D++ QA LS++P+
Sbjct: 63 MLSRDPYGIFALCLSPTRELANQIADQFTVFGAGTGLNCMVITGGEDLIQQATALSRRPN 122
Query: 534 IIIATPGRLVDHL---ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
I++ATPGRL +H NT + LK L++DEADR+L+ F E+ ++ +P++R T
Sbjct: 123 IVVATPGRLFEHFMHSSNTVQY-FSKLKCLILDEADRLLDSSFAAELKYLMSNLPQQRQT 181
Query: 705 YLFSATMTXKV 737
+FSAT+T V
Sbjct: 182 LMFSATITKSV 192
>UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 488
Score = 183 bits (445), Expect = 5e-45
Identities = 95/214 (44%), Positives = 145/214 (67%), Gaps = 10/214 (4%)
Frame = +3
Query: 126 QTP--TENVTEDTEDDKI-TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDII 296
+TP T ++ E+ + + TF+ LGV + + E C+ L+ KKP+KIQK +P A GK++I
Sbjct: 59 ETPNHTSDIHENNKKKNLETFESLGVPNWIIEICKSLQIKKPTKIQKLCLPSAFKGKNLI 118
Query: 297 GLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAV 476
G +ETG+GKT F PIL +L +NP ++L+LTPTRELAFQIS+QF G ++ +
Sbjct: 119 GCSETGTGKTICFCWPILTSLAKNPYGVYSLVLTPTRELAFQISDQFRIFGVNMNIVVLS 178
Query: 477 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPL----KYLVMDEADRILN 644
VGG+D+V+Q++ + K+PH+IIATPGRL + N + NL + KYLV DE+DR+L+
Sbjct: 179 CVGGVDIVSQSIEMEKRPHVIIATPGRLAYQVSNPER-NLSSIFANVKYLVFDESDRLLD 237
Query: 645 MDFEVEVDKILRAIPRE---RHTYLFSATMTXKV 737
+ F+ + +IL+ IP+ R T++FSAT+T +
Sbjct: 238 ISFQEPLKEILKCIPKSSEGRITFMFSATITDSI 271
>UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase
Dbp45A; n=5; Endopterygota|Rep: Probable ATP-dependent
RNA helicase Dbp45A - Drosophila melanogaster (Fruit
fly)
Length = 521
Score = 182 bits (442), Expect = 1e-44
Identities = 91/183 (49%), Positives = 122/183 (66%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ LG+ L + +L K + IQ++ IP L G+D IG A+TGSGKT AFALPIL+
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L E P +FAL+LTPT ELA+QISEQF G ++GV+ V+ GG D + ++ L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
++A PGRL DHL F+ LKYLV+DEADR+LN DF+ + I R +P+ R FS
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQNLFFS 188
Query: 717 ATM 725
ATM
Sbjct: 189 ATM 191
>UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_39979_41331 - Giardia lamblia
ATCC 50803
Length = 450
Score = 180 bits (439), Expect = 2e-44
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK--DIIGLAETGSGKTGAFALPIL 350
F+DLGV L +A E + W +P+ IQKE + V K D++G+AETGSGKTGAFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLTVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 351 QALLE---NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
Q LLE N + ++L+PTRELA Q F LG G++ +++GG+D++ Q L+
Sbjct: 63 QDLLERGTNVKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRKTLA 122
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
++PH++I TPGRLVDHL T+GF+L+ L++L++DEAD++L D V + + P+ R
Sbjct: 123 QQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKMLEQDMGRAVLNLAKDCPQRRR 182
Query: 702 TYLFSATMTXKV 737
T+LFSAT V
Sbjct: 183 TFLFSATFPSAV 194
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 176 bits (428), Expect = 5e-43
Identities = 90/209 (43%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Frame = +3
Query: 123 EQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGL 302
E+ + DT D F +L + L ACE L +KKP+ IQ IP+A+ G+D+ G
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGR 191
Query: 303 AETGSGKTGAFALPILQALLENPQRYFA----LILTPTRELAFQISEQFEALGASIGVKC 470
A TGSGKT AF LP L+ +L R A L+L PTRELA Q+ + E+L ++
Sbjct: 192 AVTGSGKTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRA 251
Query: 471 AVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 650
++VGG+ QA L +P I++ATPGR++DH+ NT F L L L++DEADR+L M
Sbjct: 252 VLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMG 311
Query: 651 FEVEVDKILRAIPRERHTYLFSATMTXKV 737
F E+ +I+R P++R T LFSAT+T V
Sbjct: 312 FLEEIKEIVRQCPKKRQTLLFSATLTAGV 340
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 175 bits (425), Expect = 1e-42
Identities = 97/230 (42%), Positives = 139/230 (60%), Gaps = 3/230 (1%)
Frame = +3
Query: 57 IYRKCLQXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWK 236
I +K Q ++ T +V Q+ + + E++ TF++L + L +A ++L +
Sbjct: 153 INKKQQQQQQQSNKQTTDKIKVLQS-NRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFS 211
Query: 237 KPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA---LILTPTR 407
+P+ IQ +AIP+AL GKDI+ A TGSGKT AF LP+L+ LL Y A LIL PTR
Sbjct: 212 QPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTR 271
Query: 408 ELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG 587
ELA Q E L + +IVGG+ AQ + L K P ++IATPGRL+DHL N G
Sbjct: 272 ELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHG 331
Query: 588 FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L L+ L++DEADR+L+M F+ E++KI+ + P R T LFSAT+ +V
Sbjct: 332 IGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEV 381
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 173 bits (421), Expect = 4e-42
Identities = 90/212 (42%), Positives = 133/212 (62%), Gaps = 4/212 (1%)
Frame = +3
Query: 114 SEVEQTPTENVTED--TEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 287
+++ Q + + E + K T++DLG++ L +A EE++++ P+ IQ AIP AL GK
Sbjct: 169 TQINQNANKKLKEQKLNKKKKKTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGK 228
Query: 288 DIIGLAETGSGKTGAFALPILQALLENPQRYF--ALILTPTRELAFQISEQFEALGASIG 461
D++ + TGSGKT AF +PILQ +P + ALI+TPTRELAFQI E F L
Sbjct: 229 DLLASSLTGSGKTAAFLIPILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTK 288
Query: 462 VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 641
++ +++G M Q L P +IIATPGRL+DHL+N++ +L L+ L+ DEAD++L
Sbjct: 289 LRACLVIGQSAMQKQEAELRGNPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLL 348
Query: 642 NMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
++ FE I+ RER T LFSAT+T +V
Sbjct: 349 DLGFEAAAQNIVENCNRERQTLLFSATLTSEV 380
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 173 bits (420), Expect = 5e-42
Identities = 92/209 (44%), Positives = 132/209 (63%), Gaps = 4/209 (1%)
Frame = +3
Query: 123 EQTPTE-NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIG 299
+ TP ++ED K F LGV + + + ++ K + +Q IP L G DI+G
Sbjct: 73 DDTPKPIQISEDNMTTK-KFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILG 131
Query: 300 LAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVI 479
A TG+GKT AFA+PILQ L +P +ALILTPTRELAFQI+EQF ALG I +KC+VI
Sbjct: 132 CARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVI 191
Query: 480 VGGMDMVAQALMLSKKPHIIIATPGRLVDHLE---NTKGFNLRPLKYLVMDEADRILNMD 650
VGG ++ QA LS++PH+++ATPGRL D +E +T + +++ V+DEADR+L
Sbjct: 192 VGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQ 251
Query: 651 FEVEVDKILRAIPRERHTYLFSATMTXKV 737
+ ++ I +I +R T L SAT+T +
Sbjct: 252 YNDQLKPIFESISEKRQTLLLSATITNNI 280
>UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP8 -
Ustilago maydis (Smut fungus)
Length = 602
Score = 171 bits (416), Expect = 2e-41
Identities = 90/195 (46%), Positives = 133/195 (68%), Gaps = 7/195 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F +G+ +L + L+ K P+ IQ IP L G+D++G A+TGSGKT FALPIL
Sbjct: 110 SFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILN 169
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEAL--GASIGVKCAVIVGGMDMVAQALMLSK- 524
L+++ FA++LTPTREL Q+ EQF A+ GA +G++CA+++GGMDM+ QA L+
Sbjct: 170 KLIKDMVGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQASELANL 229
Query: 525 KPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+PH+I+ATPGRLVDHL + G + LR K+LV+DEADR+L F+ E++ + +P +
Sbjct: 230 RPHVIVATPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRLLTDTFKPELEYLYSVLPSAK 289
Query: 699 --HTYLFSATMTXKV 737
T LF+AT+T +V
Sbjct: 290 TLQTLLFTATLTEQV 304
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 171 bits (415), Expect = 2e-41
Identities = 87/192 (45%), Positives = 128/192 (66%), Gaps = 5/192 (2%)
Frame = +3
Query: 168 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
++TF LGV +L + + P+ IQ++++P + G+D G+A TGSGKT FALPI
Sbjct: 60 EVTFSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPI 119
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
LQ L ++P FAL+LTPTRELA QI +Q A G +G++ ++GG D V Q+ +L +
Sbjct: 120 LQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGGKDSVEQSAILDSR 179
Query: 528 PHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRIL--NMDFEVEVDKILRAIP--R 692
PHI+IATPGRL LE+ N R +KYLV+DEADR+L + +F ++ IL+A+P
Sbjct: 180 PHILIATPGRLAYMLESAAAQRNFRRMKYLVLDEADRLLCGDPEFNKQLTMILQALPPIS 239
Query: 693 ERHTYLFSATMT 728
+R T+LF+AT++
Sbjct: 240 KRTTFLFTATLS 251
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 170 bits (413), Expect = 4e-41
Identities = 87/194 (44%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
DD TF DLG+ + +AC+ L WK P IQ + IP A+ KDI G AETGSGKTGA+ L
Sbjct: 3 DDSYTFSDLGLCQPMVDACKSLGWKYPMPIQIKTIPPAIEKKDICGTAETGSGKTGAYML 62
Query: 342 PILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
PI + ENP +FAL+ PTRELA QI +G I V+ I+GG+D +Q L
Sbjct: 63 PIFHHMWENPHSFFALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGVDEDSQVKALK 122
Query: 522 KKPHIIIATPGRLVDHLENT-KGFNLRPLKYLVMDEADRIL-NMDFEVEVDKILRAIPRE 695
+PH+++ATPGRL + N K L ++ LV DEAD +L F+ ++ IL +
Sbjct: 123 AQPHVVVATPGRLARLIRNNPKVIPLNKVECLVFDEADNMLREPSFQTDIQLILSKLNST 182
Query: 696 RHTYLFSATMTXKV 737
TYLFSATM ++
Sbjct: 183 HQTYLFSATMPEEI 196
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 169 bits (412), Expect = 5e-41
Identities = 91/188 (48%), Positives = 123/188 (65%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F +L + A ++ P+ IQ +AIP AL GKD+IG A TG+GKT AF LP++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L P AL+L PTRELA QI E+ E G + V+ AVI+GG+ M QA L +K
Sbjct: 65 RLAGKPGTR-ALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
I+IATPGRLVDHLE L ++ LV+DEADR+L+M F+ ++D+ILR +P++R T LF
Sbjct: 124 IVIATPGRLVDHLEQGNA-RLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLF 182
Query: 714 SATMTXKV 737
SATM +V
Sbjct: 183 SATMAGEV 190
>UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14;
Ascomycota|Rep: ATP-dependent RNA helicase DBP8 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 431
Score = 168 bits (408), Expect = 1e-40
Identities = 95/193 (49%), Positives = 126/193 (65%), Gaps = 6/193 (3%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
FK LG+ L E+ +K +P+ IQK IP L G+D IG A+TGSGKT AFA P+L
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
E+P F ++LTPTRELA QI+EQF ALG+S+ ++ +VIVGG +V QAL L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 537 IIATPGRLVDHL----ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP--RER 698
IIATPGRL H+ ++T G L KYLV+DEAD +L F + + A+P +R
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG-GLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKR 182
Query: 699 HTYLFSATMTXKV 737
T LF+AT+T +V
Sbjct: 183 QTLLFTATITDQV 195
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 167 bits (407), Expect = 2e-40
Identities = 88/191 (46%), Positives = 124/191 (64%), Gaps = 2/191 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TF+ LG+ L A + KKP++IQ + L G+D IG A+TGSGKT AFALPI+
Sbjct: 152 VTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIV 211
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ + +P +A++LTPTRELA+Q+SEQF +G +G+ A IVGGMDM+ QA L +P
Sbjct: 212 ERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARP 271
Query: 531 HIIIATPGRLVDHLEN--TKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
HII+ATPGRL D L + L ++ LV+DEADR+L F E+ + IP +R T
Sbjct: 272 HIIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQIPAKRQT 331
Query: 705 YLFSATMTXKV 737
LF+AT++ +
Sbjct: 332 CLFTATVSEAI 342
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 166 bits (404), Expect = 4e-40
Identities = 84/195 (43%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
D+ ++F+D+ + L +A + +K+P+ IQK IPV LLGKDI A TG+GKT AFAL
Sbjct: 215 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 274
Query: 342 PILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
P+L+ L+ P++ L+L PTREL Q+ L + + VGG+D+ +Q
Sbjct: 275 PVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEA 334
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L P I+IATPGRL+DHL N F+L ++ L++DEADR+L+ FE ++ +I+R
Sbjct: 335 ALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSH 394
Query: 693 ERHTYLFSATMTXKV 737
R T LFSATMT +V
Sbjct: 395 HRQTMLFSATMTDEV 409
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 165 bits (400), Expect = 1e-39
Identities = 82/191 (42%), Positives = 123/191 (64%), Gaps = 3/191 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F+ + + + + L ++ P++IQ + IP+ALLGKDI+G A TGSGKT AF +PIL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 354 ALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
LL P++ LIL PTRELA Q + + + + +GG+ + Q L K
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
+P I+IATPGR +DH+ N++GF + ++ +VMDEADR+L F E+++I++A P+ R T
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 705 YLFSATMTXKV 737
LFSATMT KV
Sbjct: 440 MLFSATMTDKV 450
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 163 bits (397), Expect = 3e-39
Identities = 80/192 (41%), Positives = 126/192 (65%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
+ K+TF+DL + + + +A +++ +++PS IQ +AIP L GKD+IG A+TG+GKT AF +
Sbjct: 3 ETKLTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGV 62
Query: 342 PILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
PI++ L+ + AL+LTPTRELA Q++E+ +G VK I GG + Q L
Sbjct: 63 PIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLR 122
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
++I TPGR++DHL + +L ++ +V+DEAD +L+M F +++KIL+ P ER
Sbjct: 123 FGVDVVIGTPGRILDHLGRST-LDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQ 181
Query: 702 TYLFSATMTXKV 737
T LFSATM ++
Sbjct: 182 TLLFSATMPPEI 193
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 163 bits (397), Expect = 3e-39
Identities = 88/204 (43%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Frame = +3
Query: 141 NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSG 320
N T D D + F+ L +++ + +A EE ++ P+ IQ EAIP+ L G D++G A+TG+G
Sbjct: 73 NQTTD-HTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTG 131
Query: 321 KTGAFALPILQAL-----LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVG 485
KT AFA+P+LQ L E ++ +LI+TPTRELA QI E F+A G G+ VI G
Sbjct: 132 KTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFG 191
Query: 486 GMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 665
G++ Q L K I+IATPGRL+D L N +LR +++ V+DEADR+L+M F ++
Sbjct: 192 GVNQNPQTASLQKGIDILIATPGRLLD-LMNQGHLHLRNIEFFVLDEADRMLDMGFIHDI 250
Query: 666 DKILRAIPRERHTYLFSATMTXKV 737
KIL +P+++ + FSATM ++
Sbjct: 251 RKILAELPKKKQSLFFSATMPPEI 274
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 163 bits (396), Expect = 4e-39
Identities = 81/185 (43%), Positives = 119/185 (64%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ LGV + A E + W KP+ IQ++ I A+ G+D+ G AETGSGKTGAF +P+L
Sbjct: 3 FQALGVHPDIIAAVESMGWSKPTPIQEKTIKQAIAGEDVSGAAETGSGKTGAFLIPLLHQ 62
Query: 357 LLEN--PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
LLE P++Y +IL PTREL QI+E + + A + + I GG+D V Q L+K+P
Sbjct: 63 LLEKDRPEKY-GIILAPTRELVIQIAEVAQLMSAKLNITIVPIYGGVDDVEQMAQLAKRP 121
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
HII+ATPGRL + + KGF+L+P++ +V+DEAD++ ++F ++ I + L
Sbjct: 122 HIIVATPGRLAQLIRDAKGFDLKPVRVIVIDEADKMAAVEFFDDISVITSNCAKTHQIML 181
Query: 711 FSATM 725
FSATM
Sbjct: 182 FSATM 186
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 162 bits (394), Expect = 7e-39
Identities = 85/192 (44%), Positives = 128/192 (66%), Gaps = 3/192 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TF++L +++ + +A + + P+ IQ+++IP+ L GKD++G A+TG+GKT AF++PIL
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 351 QALLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
Q L + R AL+LTPTRELA QI E FEA G G+K AVI GG+ Q L
Sbjct: 61 QKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRS 120
Query: 525 KPHIIIATPGRLVDHLENTKGF-NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
I++ATPGRL+D + ++GF +L L + V+DEADR+L+M F ++ +IL+ +P R
Sbjct: 121 GIQILVATPGRLLDLI--SQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQ 178
Query: 702 TYLFSATMTXKV 737
T FSATM ++
Sbjct: 179 TLFFSATMPPEI 190
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 162 bits (394), Expect = 7e-39
Identities = 89/192 (46%), Positives = 127/192 (66%), Gaps = 3/192 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TF++LG+ + +A EL ++KPS IQ++AIP AL G+D++G A+TG+GKT AFA PIL
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 351 QAL---LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
Q L + + +LILTPTRELA QI E FEA G + ++ AVI GG+ Q L
Sbjct: 61 QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLK 120
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
K I++ATPGRL+D L+ +L L+ V+DEADR+L+M F +V ++L+ +P +
Sbjct: 121 KGVDILVATPGRLLD-LQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQ 179
Query: 702 TYLFSATMTXKV 737
T FSATM +V
Sbjct: 180 TLFFSATMPPEV 191
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 162 bits (393), Expect = 9e-39
Identities = 89/207 (42%), Positives = 121/207 (58%), Gaps = 5/207 (2%)
Frame = +3
Query: 132 PTENVTED--TEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLA 305
P E ED T K +F++ + + + + P+ IQ++ IPVALLGKDI+G A
Sbjct: 775 PEEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSA 834
Query: 306 ETGSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAV 476
TGSGKT AF +PIL+ LL P++ IL PTRELA Q L +
Sbjct: 835 VTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQ 894
Query: 477 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 656
+VGG + Q +L K+P +IIATPGR +DH+ N+ F + L+ LV+DEADR+L F
Sbjct: 895 LVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFA 954
Query: 657 VEVDKILRAIPRERHTYLFSATMTXKV 737
E+++IL IP+ R T LFSATMT V
Sbjct: 955 DELNEILTTIPKSRQTMLFSATMTDSV 981
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 161 bits (392), Expect = 1e-38
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
D+ +TF+D+ + L +A + + +P+ IQK IPV LLGKDI A TG+GKT AF L
Sbjct: 178 DESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFML 237
Query: 342 PILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
P+L+ L+ P+ L+L PTREL Q+ L V + VGG+D+ Q
Sbjct: 238 PVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEA 297
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L P ++IATPGRL+DHL N F+L ++ L++DEADR+L+ FE ++ +I+R
Sbjct: 298 ALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSH 357
Query: 693 ERHTYLFSATMTXKV 737
+R T LFSATM+ +V
Sbjct: 358 QRQTLLFSATMSEEV 372
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 161 bits (392), Expect = 1e-38
Identities = 80/184 (43%), Positives = 118/184 (64%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF++LG+ D L ++ E + +++ + IQ E IP AL GKDIIG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
+ + + +++ PTRELA Q+ E+ +G V+ I GG D+ Q L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
II+ TPGR++DH+ N K L+ ++ +V+DEAD +LNM F +++ IL +P T LF
Sbjct: 123 IIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLF 181
Query: 714 SATM 725
SATM
Sbjct: 182 SATM 185
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 161 bits (391), Expect = 2e-38
Identities = 79/187 (42%), Positives = 123/187 (65%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F +G+ L + +E ++KP+ IQ ++IP+A+ G D++G A+TG+GKT +F +PIL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
+++ + AL+L PTRELA Q++E+ +L + ++ I GG + Q L + P I
Sbjct: 66 VIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
I+ TPGRL+DH+ N +L PLKY+V+DEAD +L+M F ++ KIL PRER T+LFS
Sbjct: 125 IVGTPGRLMDHM-NRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFS 183
Query: 717 ATMTXKV 737
AT+ +V
Sbjct: 184 ATLPDEV 190
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 161 bits (390), Expect = 2e-38
Identities = 73/187 (39%), Positives = 123/187 (65%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DL + + L + C+E +P+++Q++ IP L G D+I +++TGSGKT AF LPI+
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
LL+ + ++ L++ PTREL+ QI+E F A+ G++ ++VGG + QA LSK+PH+
Sbjct: 63 LLQKNRSFYCLVVAPTRELSSQIAECFNMFQAT-GLRVCLLVGGANFNVQANQLSKRPHV 121
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
++ TPGR+ +H+ TK F ++ V+DEADR DF +++ I+ ++ +R T LF+
Sbjct: 122 VVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETIIPSLREKRQTLLFT 181
Query: 717 ATMTXKV 737
ATM+ ++
Sbjct: 182 ATMSDEI 188
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 160 bits (388), Expect = 4e-38
Identities = 81/190 (42%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F DLG+ D + +A ++ ++ PS IQ IP L G+D++G A+TG+GKT AFALP+L
Sbjct: 15 LLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLL 74
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 527
+ N + L+L PTRELA Q++E F+ ASI G + + GG Q L +
Sbjct: 75 TRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRG 134
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
H+I+ TPGR++DHLE +L LK LV+DEAD +L M F +V+++LR +P R
Sbjct: 135 VHVIVGTPGRVIDHLERGT-LDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVA 193
Query: 708 LFSATMTXKV 737
LFSATM ++
Sbjct: 194 LFSATMPPQI 203
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 160 bits (388), Expect = 4e-38
Identities = 85/221 (38%), Positives = 131/221 (59%), Gaps = 10/221 (4%)
Frame = +3
Query: 105 NQXSEVEQTPTENVTEDTEDDKI------TFKDLGVVDVLCEACEELKWKKPSKIQKEAI 266
++ + E+ + +TE D+ F L + + + L + KPS IQ I
Sbjct: 203 DEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATI 262
Query: 267 PVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA---LILTPTRELAFQISEQF 437
P+ALLGKDII A TGSGKT AF +PI++ LL P + + ++L PTRELA Q+++
Sbjct: 263 PIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVG 322
Query: 438 EALGASI-GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYL 614
+ + + G+ + VGG+++ Q ML +P I+IATPGR +DH+ N+ FN+ ++ L
Sbjct: 323 KQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEIL 382
Query: 615 VMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
VMDEADR+L F+ E+++I+ +P R LFSATM K+
Sbjct: 383 VMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKI 423
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 159 bits (387), Expect = 5e-38
Identities = 92/195 (47%), Positives = 120/195 (61%), Gaps = 7/195 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F + + L A L++ P+ IQ AIP+ALLG+DI+G A TGSGKT AF +PIL+
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 354 ALLENPQ-----RYFALILTPTRELAFQISEQFEALGASIG--VKCAVIVGGMDMVAQAL 512
L + L+L PTRELA Q +AL G V+ A++VGG+ + AQA
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAH 342
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L P I+IATPGRL+DHL NT F L L LV+DEADR+L F E+++I++A PR
Sbjct: 343 TLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPR 402
Query: 693 ERHTYLFSATMTXKV 737
R T LFSATMT V
Sbjct: 403 SRQTMLFSATMTDSV 417
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 159 bits (387), Expect = 5e-38
Identities = 104/235 (44%), Positives = 135/235 (57%), Gaps = 16/235 (6%)
Frame = +3
Query: 81 RKAMESATNQXSEVEQTPTENVTEDTE------DDKITFKDLGVVDVLCEACEELKWKKP 242
+K E+ + +E E TP V E D TF L V L ++ + K+P
Sbjct: 160 KKQAEAPKTEKTE-EATPALPVPEPASTVSVPIDANTTFDALNVRPWLVQSLANMAIKRP 218
Query: 243 SKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQ 422
+ IQK IP L G+D IG + TGSGKT AFA+PILQ NP F +ILTPTRELA Q
Sbjct: 219 TGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQQWAANPSAIFGVILTPTRELALQ 278
Query: 423 ISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG----F 590
I EQ AL +K +I GG DM QA+ L+K+PH++IATPGRL DH+ T G
Sbjct: 279 IMEQVIALSQPHVLKAVLITGGADMRKQAIDLAKRPHLVIATPGRLADHI-RTSGEDTIC 337
Query: 591 NLRPLKYLVMDEADRIL------NMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
LR +K++V+DEADR+L +M +VE + P ER T LF+ATMT +V
Sbjct: 338 GLRRVKFIVLDEADRLLANSGHGSMLPDVEECFSVLPPPSERQTLLFTATMTPEV 392
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 158 bits (384), Expect = 1e-37
Identities = 78/184 (42%), Positives = 118/184 (64%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF++LG+ + +A E + +++ + IQ + IP++L KD+IG A+TG+GKT AF +PI++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
+ AL++ PTRELA Q+SE+ +GA V+ I GG D+ Q L K PH
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+I+ TPGR++DH+ N L + +V+DEAD +LNM F +++ IL +P ER T LF
Sbjct: 123 VIVGTPGRIIDHI-NRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLF 181
Query: 714 SATM 725
SATM
Sbjct: 182 SATM 185
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 158 bits (384), Expect = 1e-37
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Frame = +3
Query: 132 PTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAET 311
P E + + +F+++ + + + + KP+ IQ + IP++L+GKD++G A T
Sbjct: 280 PEEENQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVT 339
Query: 312 GSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIV 482
GSGKT AF +PIL+ LL P++ +ILTPTRELA Q L + +K + V
Sbjct: 340 GSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAV 399
Query: 483 GGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVE 662
GG+ + Q L +P ++IATPGR +DH+ N+ F + ++ LV+DEADR+L F E
Sbjct: 400 GGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADE 459
Query: 663 VDKILRAIPRERHTYLFSATMTXKV 737
+++IL +P+ R T LFSATMT V
Sbjct: 460 LNEILTTLPKSRQTMLFSATMTSSV 484
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 157 bits (381), Expect = 3e-37
Identities = 87/198 (43%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Frame = +3
Query: 147 TEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKT 326
T DT+ + F LG+ D L E + L ++ + IQ IP+ L G+D++GLA+TG+GKT
Sbjct: 3 TPDTQPSR--FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKT 60
Query: 327 GAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVA 503
AFALPIL + + AL+L PTRELA Q++E F + G + G++ I GG DM
Sbjct: 61 AAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQ 120
Query: 504 QALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRA 683
Q L + HI++ATPGRL+DH+E + +L + +V+DEAD +L M F +VD IL
Sbjct: 121 QLKSLREGTHIVVATPGRLLDHIER-RSIDLTGINAVVLDEADEMLRMGFIDDVDTILAK 179
Query: 684 IPRERHTYLFSATMTXKV 737
P+ER LFSATM +V
Sbjct: 180 TPKERKVALFSATMPKRV 197
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 157 bits (381), Expect = 3e-37
Identities = 82/169 (48%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Frame = +3
Query: 240 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---FALILTPTRE 410
P+ IQ++ IPVALLGKD++G A TGSGKTGAF +PIL+ LL P++ IL PTRE
Sbjct: 328 PTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRE 387
Query: 411 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 590
LA Q L + +VGG + Q +L K+P +IIATPGR +DH+ N+ F
Sbjct: 388 LAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASF 447
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+ L+ LV+DEADR+L F E+++IL IP+ R T LFSATMT V
Sbjct: 448 TVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNV 496
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 157 bits (381), Expect = 3e-37
Identities = 85/220 (38%), Positives = 128/220 (58%), Gaps = 3/220 (1%)
Frame = +3
Query: 87 AMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAI 266
A E A + TENV + + +F+ + + + + + KP+ IQ + I
Sbjct: 250 AEEEARRKEFFAAPEETENVGK--KGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTI 307
Query: 267 PVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQF 437
P+AL+GKD++G A TGSGKT AF +PIL+ LL P++ ++LTPTRELA Q
Sbjct: 308 PIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVA 367
Query: 438 EALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
L + +K + VGG+ + Q L +P ++IATPGR +DH+ N+ F + ++ LV
Sbjct: 368 TKLASHTDIKFCLAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILV 427
Query: 618 MDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+DEADR+L F E+++IL +P+ R T LFSATMT V
Sbjct: 428 LDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSTV 467
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 157 bits (380), Expect = 4e-37
Identities = 86/213 (40%), Positives = 132/213 (61%), Gaps = 7/213 (3%)
Frame = +3
Query: 120 VEQTPTEN----VTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 287
++ PTE+ V + DD+ F DLG+ + + A E+ + P+ IQ +AIPV L+G+
Sbjct: 202 IQPAPTEDTVQAVAPEEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGR 261
Query: 288 DIIGLAETGSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQFEALGASI 458
D++G A+TG+GKT +F LP++ L + R +LIL PTRELA Q++E F G +
Sbjct: 262 DVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYL 321
Query: 459 GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRI 638
+ A+++GG M Q +LSK ++IATPGRL+D L + G L + LV+DEADR+
Sbjct: 322 KLNHALLIGGESMNDQRDVLSKGVDVLIATPGRLID-LFDRGGLLLTDTRILVIDEADRM 380
Query: 639 LNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L+M F +V++I+ +P R T FSATM ++
Sbjct: 381 LDMGFIPDVERIVSLLPHNRQTLFFSATMAPEI 413
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 156 bits (379), Expect = 5e-37
Identities = 89/217 (41%), Positives = 131/217 (60%), Gaps = 3/217 (1%)
Frame = +3
Query: 84 KAMESATN-QXSEVEQTPT--ENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQ 254
K M++A+ Q SE + T + + + D F G+ D + + E + PS +Q
Sbjct: 13 KRMDNASLIQQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQ 72
Query: 255 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 434
++IP+ L GKD+I A+TG+GKT AFA+PIL L N ALI+TPTRELA QISE+
Sbjct: 73 SQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEE 131
Query: 435 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYL 614
LG +K + GG + Q +L KKP +IATPGRL+DHL+N + + P + +
Sbjct: 132 ILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSP-QIV 190
Query: 615 VMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATM 725
V+DE+D +L+M F ++++I + +P R T LFSATM
Sbjct: 191 VLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLFSATM 227
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 156 bits (379), Expect = 5e-37
Identities = 86/196 (43%), Positives = 126/196 (64%), Gaps = 8/196 (4%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF G+ + +A E + P+ IQ +AIPV L G+D++G A+TG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 354 ALL------ENPQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 509
LL +P R+ ALILTPTRELA Q++ A ++ AV+ GG+DM Q
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 510 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP 689
L + I+IATPGRL+DH++ K NL ++ LV+DEADR+L+M F ++ +IL +P
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLP 190
Query: 690 RERHTYLFSATMTXKV 737
+ER T LFSAT + ++
Sbjct: 191 KERQTLLFSATFSPEI 206
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 156 bits (379), Expect = 5e-37
Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 1/192 (0%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 344
+ +TF DLG+ VL + + L ++ P+ IQ +AI L G D++GLA+TG+GKT AF+LP
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 345 ILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLS 521
+L + + AL+L PTRELA Q++E F+ + I GG DM Q L
Sbjct: 63 LLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALK 122
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ P +I+ TPGR++DHL +L LK+LV+DEAD +L M F ++D IL P+++
Sbjct: 123 QNPQVIVGTPGRVMDHLRRGT-LDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQ 181
Query: 702 TYLFSATMTXKV 737
T LFSATM ++
Sbjct: 182 TALFSATMPHQI 193
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 156 bits (378), Expect = 6e-37
Identities = 84/195 (43%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
D TF ++ + L +A + + P+ IQ IPVAL+G+DI G A TG+GKT A+ L
Sbjct: 151 DTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYML 210
Query: 342 PILQALLENPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
P L+ LL P L+L PTREL Q+ + + L V+ + VGG+D+ Q
Sbjct: 211 PTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVKVQES 270
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
+L K P I+IATPGRL+DHL NT F+L ++ L++DEADR+L+ F ++ I+R R
Sbjct: 271 VLRKNPDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMKHIVRQCAR 330
Query: 693 ERHTYLFSATMTXKV 737
R T LFSATMT +V
Sbjct: 331 TRQTILFSATMTEEV 345
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 155 bits (377), Expect = 8e-37
Identities = 86/195 (44%), Positives = 120/195 (61%), Gaps = 1/195 (0%)
Frame = +3
Query: 156 TEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAF 335
T K+ F +L + + A E+ +++ S IQ EAIPV L GKDIIG A+TG+GKT AF
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAF 63
Query: 336 ALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQAL 512
A+P ++ L + ALIL PTREL Q+SEQF L G + I GG ++ Q
Sbjct: 64 AIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLR 123
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L K P I+IATPGR++DH+ +L +K +V+DEAD +L+M F +++ IL+ P
Sbjct: 124 ALRKNPQIVIATPGRMMDHMRR-GSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPA 182
Query: 693 ERHTYLFSATMTXKV 737
+R T +FSATMT V
Sbjct: 183 DRQTIMFSATMTDDV 197
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 155 bits (377), Expect = 8e-37
Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 5/230 (2%)
Frame = +3
Query: 63 RKCLQXRKAMESATNQXSEVEQTPTENVTEDTED-DKITFKDLGVVDVLCEACEELKWKK 239
+K + RK E A ++ EVE E E+T TF+ L + D ++ +E+ + +
Sbjct: 118 KKKKKQRKDTE-AKSEEEEVEDKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFAR 176
Query: 240 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYFA-LILTPTR 407
++IQ +AIP ++G+D++G A TGSGKT AF +P ++ L P+ L++ PTR
Sbjct: 177 MTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTR 236
Query: 408 ELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG 587
ELA Q + L ++GG +A +L+K ++++ATPGRL+DHLENT G
Sbjct: 237 ELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNG 296
Query: 588 FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
F + LK+LVMDEADRIL +FE ++ KIL +P+ R T LFSAT + KV
Sbjct: 297 FIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKV 346
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 155 bits (376), Expect = 1e-36
Identities = 91/228 (39%), Positives = 138/228 (60%), Gaps = 9/228 (3%)
Frame = +3
Query: 81 RKAMESATNQXSEVEQTPTENVTEDT----ED--DKITFKDLGVVDVLCEACEELKWKKP 242
R+ ++AT + VE+T +T ED D+ F DLG+ + + A EEL ++ P
Sbjct: 255 RRRTKAATATPAVVEETVEAPAVVETVVVAEDVSDRPRFADLGLSEPIMRAIEELGYEHP 314
Query: 243 SKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---FALILTPTREL 413
+ IQ +AIP L G D++G+A+TG+GKT +F LP+LQ L + R +LIL PTREL
Sbjct: 315 TPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLILEPTREL 374
Query: 414 AFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFN 593
A Q++E F+ G + + A+++GG M Q +L++ ++IATPGRL+D L G
Sbjct: 375 ALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLD-LFGRGGLL 433
Query: 594 LRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L LV+DEADR+L+M F +++KI+ +P R T FSATM ++
Sbjct: 434 LTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLFFSATMAPEI 481
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 155 bits (376), Expect = 1e-36
Identities = 82/192 (42%), Positives = 122/192 (63%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DLG+ L +A + + P+ IQ +AIP+ + G+D++G+A+TG+GKT AFALPIL
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 357 LLEN----PQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L E+ P+R F L+L+PTRELA QI+E F G +G+ A I GG+ Q L+
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+++ATPGRL+DHL K +L ++ V+DEAD++L++ F V + KI +P+ER
Sbjct: 187 AGVDVVVATPGRLMDHL-GEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQ 245
Query: 702 TYLFSATMTXKV 737
FSATM ++
Sbjct: 246 NLFFSATMPSEI 257
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 155 bits (376), Expect = 1e-36
Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 9/231 (3%)
Frame = +3
Query: 72 LQXRKAMESATNQXSEVEQT-PTENVTEDTE-DDKI-----TFKDLGVVDVLCEACEELK 230
L+ RK E + +VE+ P +++ ++ + D KI F L + L +AC +
Sbjct: 76 LKIRKQNEQFYEEPEQVEEEDPQQDLQQEQQLDSKIFAIDTEFHQLKLNKALVKACHDQG 135
Query: 231 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQAL--LENPQRYFALILTPT 404
+ P+ +Q + IP+ + GKD++ + TGSGKT AF LPI+Q L+N Q ALI+ PT
Sbjct: 136 YTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPIMQRFGNLKNLQYSKALIILPT 195
Query: 405 RELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTK 584
RELA Q E FE L A+++G + + Q L K P IIIATPGR VD L N+
Sbjct: 196 RELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETELRKYPDIIIATPGRTVDLLTNSS 255
Query: 585 GFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
++ ++ LV DEADR++ M FE E+ +IL+A ++R T L SAT+ V
Sbjct: 256 SLEIQNIEILVFDEADRLMEMGFEKEIRQILQATSKDRQTVLISATLNATV 306
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 155 bits (375), Expect = 1e-36
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 5/189 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F+D G+ + + A E + P+ IQ + IP AL G+D++G+A+TG+GKT +FALPIL
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 354 ALLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
LLE+ P+ L+L+PTREL+ QI + F A G I + + +GG+ M Q L
Sbjct: 77 RLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSL 136
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+ +++ATPGRL+D L + G L +++LV+DEADR+L+M F ++ KI+ +P +R
Sbjct: 137 MQGVEVLVATPGRLLD-LVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKR 195
Query: 699 HTYLFSATM 725
T FSATM
Sbjct: 196 QTLFFSATM 204
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 155 bits (375), Expect = 1e-36
Identities = 80/206 (38%), Positives = 125/206 (60%), Gaps = 3/206 (1%)
Frame = +3
Query: 129 TPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAE 308
T V E + D TF+ LG++ L EA L +++P+ IQ+ A+P L GKD++G+A
Sbjct: 23 TSPSTVKETSAADN-TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAA 81
Query: 309 TGSGKTGAFALPILQALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVI 479
TG+GKT AF+LP+LQ + F AL+L PTRELA Q++E G +G+ +
Sbjct: 82 TGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPL 141
Query: 480 VGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEV 659
GG + Q +L + +++ATPGR +DHL+ K L ++ +V+DEAD +L+M F
Sbjct: 142 YGGQVISQQLRVLKRGVDVVVATPGRALDHLQR-KTLKLEQVRVVVLDEADEMLDMGFAE 200
Query: 660 EVDKILRAIPRERHTYLFSATMTXKV 737
+++ IL + P +R T LFSAT+ ++
Sbjct: 201 DLEAILSSTPEKRQTALFSATLPPRI 226
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 155 bits (375), Expect = 1e-36
Identities = 81/217 (37%), Positives = 132/217 (60%)
Frame = +3
Query: 75 QXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQ 254
Q +K ES + V++ ++ K +F L + V+ E ++ + IQ
Sbjct: 25 QTQKKKESTLDPNLLVKKAKPSG--QEGFQSKTSFASLSLDSVMMRNLSEKGYENMTNIQ 82
Query: 255 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 434
+++I L G+D++G++ TGSGKTGAF +PI++ L+NP ++ ALI+TPTRELA QI ++
Sbjct: 83 EQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEHALKNPGQFTALIVTPTRELALQIDQE 142
Query: 435 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYL 614
F++L + + A +GG ++ +LS+K H+I+ TPGRL+D L N K L +K L
Sbjct: 143 FKSLSKGMRLHSATFIGGTNINTDMKVLSRKLHVIVGTPGRLLD-LTNRKLLKLNQVKTL 201
Query: 615 VMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATM 725
V+DE DR+L+M F +V K++ + + T LFSAT+
Sbjct: 202 VLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFSATL 238
>UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia
theta|Rep: DEAD box protein - Guillardia theta
(Cryptomonas phi)
Length = 386
Score = 155 bits (375), Expect = 1e-36
Identities = 75/186 (40%), Positives = 116/186 (62%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F +G+ + CE + +KK +K+Q IP L+GKD++ ++TGSGKT A+ LP+L
Sbjct: 2 VKFDQIGICKQISRVCEAVGFKKATKVQVYTIPHFLIGKDLLVYSQTGSGKTLAYILPLL 61
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
Q LL Y +I+ P+REL FQIS FE + ++ A + GG+D Q +M+S P
Sbjct: 62 QKLLYKKNNYLPIIIVPSRELVFQISTTFETISCVFNIRIASLTGGIDPNVQLVMISSNP 121
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
III+TPGRLV+ L+ TK ++ LV+DEAD++++ DF+ E++ I + + L
Sbjct: 122 DIIISTPGRLVEILKLTKNLEIKFCTDLVLDEADKLIHSDFKREINIINSKTNKNKKLML 181
Query: 711 FSATMT 728
FSATM+
Sbjct: 182 FSATMS 187
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 154 bits (374), Expect = 2e-36
Identities = 72/189 (38%), Positives = 120/189 (63%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F +L + + A E+ +++ + IQ++AIP+A+ GKD+IG A TG+GKT AF +P++
Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+A+ + L++ PTRELA Q++E+ +G G++ I GG D +Q L + P
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELP 121
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
HI++ TPGRL++H+ + ++ V+DEAD++L+M F E +KIL+ +P R T L
Sbjct: 122 HIVVGTPGRLLEHMRR-EYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLL 180
Query: 711 FSATMTXKV 737
FSAT++ V
Sbjct: 181 FSATLSPPV 189
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 154 bits (374), Expect = 2e-36
Identities = 79/184 (42%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
FK+LG+ D ++ E + +K+P+ IQK++IP AL G DI+G A+TG+GKTGAF +P+++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
++ Q +LIL PTRELA Q++EQ GV+ + GGM + Q L K P I
Sbjct: 64 VV-GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR-ERHTYLF 713
++ TPGR++DHL N + + L++DEAD ++NM F ++ I+ IP +R T LF
Sbjct: 123 VVGTPGRVIDHL-NRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLF 181
Query: 714 SATM 725
SATM
Sbjct: 182 SATM 185
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 154 bits (373), Expect = 2e-36
Identities = 76/189 (40%), Positives = 114/189 (60%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
ITF+D + L +A + +++ + IQ + IP+ L KD+IG A+TG+GKT AF +P++
Sbjct: 3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ + A+++ PTRELA Q+SE+ +G K I GG D+ Q L K P
Sbjct: 63 EKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNP 122
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
+II+ TPGRL+DH+ N + L + +VMDEAD +LNM F +++ IL +P E T L
Sbjct: 123 NIIVGTPGRLLDHI-NRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLL 181
Query: 711 FSATMTXKV 737
FSATM +
Sbjct: 182 FSATMPAPI 190
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 153 bits (372), Expect = 3e-36
Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 6/196 (3%)
Frame = +3
Query: 159 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 338
+ + ITF++LGV D L + + + P+KIQ+ +P+ + GK++IG +ETGSGKT +
Sbjct: 66 QSNNITFEELGVEDWLIKISKSVHILYPTKIQQLCLPLIIQGKNVIGSSETGSGKTICYC 125
Query: 339 LPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
ILQ L +N F+LIL PTREL FQI EQF G+ IGV +GG ++ Q +
Sbjct: 126 WSILQELNKNVYGIFSLILLPTRELVFQIIEQFHLYGSKIGVMILSCIGGFSLIEQRKSV 185
Query: 519 SKKPHIIIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
KPHII+ TPGR+ D LE++ + L++LV+DEAD +L FE ++ IL +P+
Sbjct: 186 MTKPHIIVGTPGRISDILESSIDIQNCFKRLRFLVLDEADLLLQKCFEDKLQNILNNLPK 245
Query: 693 ----ERHTYLFSATMT 728
ER T FS+T+T
Sbjct: 246 NYANERKTLFFSSTIT 261
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 153 bits (370), Expect = 6e-36
Identities = 77/185 (41%), Positives = 116/185 (62%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F +LG+ E E+L + P+ IQ +AIP L G+D++G ++TG+GKT AF+LPIL
Sbjct: 3 LSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPIL 62
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ L + A++LTPTRELA Q+ + + G++ I GG + Q L L +
Sbjct: 63 ERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGV 122
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
HI++ TPGR++D LE L +K+ V+DEAD +L+M F +V+KIL P++R T L
Sbjct: 123 HIVVGTPGRVIDLLER-GNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTAL 181
Query: 711 FSATM 725
FSATM
Sbjct: 182 FSATM 186
>UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 520
Score = 152 bits (369), Expect = 8e-36
Identities = 86/190 (45%), Positives = 120/190 (63%), Gaps = 7/190 (3%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ LGV L + C + P+ IQK IP L GK ++G A TGSGKT AF LP+LQ
Sbjct: 4 FEALGVHQWLSKQCAYMALHHPTPIQKLCIPSILAGKCVVGGAATGSGKTAAFVLPLLQI 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L E+P FAL+LTP+RELA+QI +QF ALGA + ++ A+ +GG+ Q +L +PH+
Sbjct: 64 LAEDPYGVFALVLTPSRELAYQILDQFVALGAPLHIRAALAIGGVPHEQQVSVLHGRPHV 123
Query: 537 IIATPGRLVDHL----ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI--PR-E 695
++ATPGRL L E K F+ L++LV+DEADR+ D E +V ++ + PR
Sbjct: 124 VVATPGRLKFLLGTFPEARKAFS--HLRFLVLDEADRLTTDDMEGDVSDVVELLQPPRPT 181
Query: 696 RHTYLFSATM 725
R T LF+AT+
Sbjct: 182 RRTLLFTATL 191
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 152 bits (369), Expect = 8e-36
Identities = 85/197 (43%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
D +++ D + K++KPS IQ A PV L G D+IG+AETGSGKT +F L
Sbjct: 98 DPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLL 157
Query: 342 PIL-----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 506
P + Q ++ L+L PTRELA QI + E G S +KCA I GG D +Q
Sbjct: 158 PSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQ 217
Query: 507 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
+L + ++IATPGRL+D LE ++ LR + YLV+DEADR+L+M FE+++ KIL I
Sbjct: 218 RALLQQGVDVVIATPGRLIDFLE-SETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQI 276
Query: 687 PRERHTYLFSATMTXKV 737
+R T +FSAT V
Sbjct: 277 RPDRQTLMFSATWPKNV 293
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 152 bits (369), Expect = 8e-36
Identities = 74/191 (38%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F LG + + + C+E+ KP+ +Q+ + + G + I +++TG+GKT AFALPI+
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L ++P +AL+++PTRELA QI +QF+ G + I+GG+ + QA L K PHI
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASALEKNPHI 124
Query: 537 IIATPGRLVDHLEN-TKG---FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
++ATPGR++ HL + +KG F+ L+YLV+DE DR+ + +V +I++ +P +R T
Sbjct: 125 VVATPGRILHHLRSASKGNTRFSFDNLQYLVLDEVDRLFKDGYWDDVLEIIKYLPEKRQT 184
Query: 705 YLFSATMTXKV 737
FSAT + +V
Sbjct: 185 LCFSATKSDQV 195
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 152 bits (368), Expect = 1e-35
Identities = 88/215 (40%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Frame = +3
Query: 99 ATNQXSEVEQTPTEN---VTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIP 269
+T+ + T T N T+ T+++K+TF DL + + A E + P+ IQ EAIP
Sbjct: 17 STDTPNTTANTDTNNEAATTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIP 76
Query: 270 VALLGKDIIGLAETGSGKTGAFALPILQAL---LENPQRYFALILTPTRELAFQISEQFE 440
AL G+D++ A+TGSGKT AF +P+L L + ALILTPTRELA Q+ +
Sbjct: 77 FALQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVR 136
Query: 441 ALGASI-GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
+ G+ C +VGG Q L K +I+ATPGRL+DH+ N +L L+ LV
Sbjct: 137 TYSKDMRGLFCVPLVGGAPYNGQITALKKGVQVIVATPGRLLDHI-NAGRVDLSSLEILV 195
Query: 618 MDEADRILNMDFEVEVDKILRAIPRERHTYLFSAT 722
+DEADR+L+M F ++ ILRA P +R T + SAT
Sbjct: 196 LDEADRMLDMGFADDISDILRAAPIDRQTIMCSAT 230
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 152 bits (368), Expect = 1e-35
Identities = 75/189 (39%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPIL 350
+FK+LG+ D + EA E+ + P+ IQ++AIP+ + GK DI+G A+TG+GKT AF +PIL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ + E+ + ALIL PTRELA Q++E+ +++ S + + GG + Q L +
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
I++ TPGR++DH+ + + L + Y+V+DEAD +LNM F +V++IL+++ E+ L
Sbjct: 123 QIVVGTPGRILDHI-SRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLL 181
Query: 711 FSATMTXKV 737
FSAT+ +
Sbjct: 182 FSATLPDSI 190
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 151 bits (367), Expect = 1e-35
Identities = 86/211 (40%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Frame = +3
Query: 96 SATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 275
S+T + + ++ + E D TF LG+ L ++ KP+KIQ+ IP
Sbjct: 5 SSTTRATIKKKDEETKIKEVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPL 64
Query: 276 LLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGAS 455
L +++G AETGSGKT AFALPI+ L +P FAL+LTPTRELA QI++QF+A GA
Sbjct: 65 LSFHNVLGGAETGSGKTAAFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGAC 124
Query: 456 IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADR 635
I ++ +VGG+D++ LS PH+IIATPG+LV +++ F+ K+L++DEADR
Sbjct: 125 INIRVVQVVGGVDVIRILHHLSGSPHVIIATPGKLVSLIDHLP-FSFDSAKFLILDEADR 183
Query: 636 ILNMDFEV--EVDKILRAIPRERHTYLFSAT 722
+ + + +V KI + T LFSAT
Sbjct: 184 LFDPSTGMLDDVQKIRSKFSKTVTTGLFSAT 214
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 151 bits (367), Expect = 1e-35
Identities = 80/193 (41%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF++L ++ + +A E +K P+ IQ + IP AL G+D++G A+TG+GKT A ALPIL
Sbjct: 3 TFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILN 62
Query: 354 ALLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
L +N P AL+L PTRELA QI + F+A G + ++ +I GG+ Q L
Sbjct: 63 QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+ HI++ATPGRL+D L N L L+ V+DEADR+L+M F ++ +I+ +P +R
Sbjct: 123 KRGAHILVATPGRLLD-LMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQR 181
Query: 699 HTYLFSATMTXKV 737
+ FSAT+ K+
Sbjct: 182 QSLFFSATLAPKI 194
>UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2;
Cryptosporidium|Rep: ATP-dependent RNA helicase -
Cryptosporidium hominis
Length = 499
Score = 151 bits (367), Expect = 1e-35
Identities = 81/195 (41%), Positives = 123/195 (63%), Gaps = 8/195 (4%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F +LG+ + + C+ LK + P+ IQ ++IP L G++++G A TGSGKT + LP+LQ
Sbjct: 3 FLNLGLHKWVQDTCDSLKIQTPTAIQSKSIPYILKGRNVVGNAPTGSGKTLCYCLPMLQI 62
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS-KKPH 533
L E+P F L+L P+REL++Q+ +QF+ G + C V+ GG D Q +L+ K+PH
Sbjct: 63 LAEDPFSVFGLVLVPSRELSYQVLDQFQVFGNKVNANCQVLTGGFDESEQIHILNQKRPH 122
Query: 534 IIIATPGRLVDHLENTKGFN----LRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE-- 695
I+I TPGRL + + G N LR L++LV+DEADR+L+ E ++ IL +P+
Sbjct: 123 ILIGTPGRL-SSIISYPGSNISDLLRNLRFLVLDEADRLLSESLEDDMLPILSILPKSCT 181
Query: 696 -RHTYLFSATMTXKV 737
R T LFSAT+T +
Sbjct: 182 GRQTLLFSATLTNAI 196
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 151 bits (366), Expect = 2e-35
Identities = 79/193 (40%), Positives = 125/193 (64%), Gaps = 4/193 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F+ LGV+ L A ++L ++KP+ IQ AIP+ L D+ A+TG+GKT AF L +L
Sbjct: 1 MSFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGML 60
Query: 351 QALL---ENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
Q L ++ QR L++ PTREL+ QI E ++ ++G+ AV+VGG D+ +Q +L
Sbjct: 61 QRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKIL 120
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+ I+IATPGR+++H++ KG +L ++ V+DEADR+L+M F E+ +I +P+
Sbjct: 121 KEGVDIVIATPGRVLEHVD--KGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRH 178
Query: 699 HTYLFSATMTXKV 737
T LFSAT + KV
Sbjct: 179 QTLLFSATFSDKV 191
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 151 bits (365), Expect = 2e-35
Identities = 85/201 (42%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Frame = +3
Query: 150 EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 329
E + D F LG+ + +A L + P+ IQ +AIP L KD++GLA+TG+GKT
Sbjct: 96 EQPKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTA 155
Query: 330 AFALPILQALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 494
AFALP++Q LL NP + A+IL+PTRELA QI E F + G + + +GG
Sbjct: 156 AFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAP 215
Query: 495 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKI 674
+ Q LSK I++ATPGRL D L + KG L K+LV+DEAD++L++ F V +I
Sbjct: 216 IRKQMRDLSKGVDILVATPGRLED-LVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRI 274
Query: 675 LRAIPRERHTYLFSATMTXKV 737
+ + ++R T LFSATM+ ++
Sbjct: 275 ISKVNKDRQTLLFSATMSKEI 295
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 151 bits (365), Expect = 2e-35
Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F LG+ + + C+++ ++ P+KIQ+ AIP L + +I AETGSGKT FA PILQ
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L ++P FA++LT RELA QISEQF G+S+ ++ + +VGG+D Q L + PHI
Sbjct: 64 LAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSELERIPHI 123
Query: 537 IIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
++ TPGR +D ++ + + +KYLV+DEADR+ ++ IL IP+E+ L
Sbjct: 124 VVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADRLFEDSIIEDIQSILEFIPQEKQIIL 183
Query: 711 FSATM 725
+AT+
Sbjct: 184 ATATI 188
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 150 bits (364), Expect = 3e-35
Identities = 86/192 (44%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DL ++ L + +E ++ P+ IQ AIPV L G D++G+A+TG+GKT AF+LPILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 357 LLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L ++ P+ LILTPTRELA QI E EA + +K AVI GG+ Q L
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
I+IATPGRL+D L K L ++ V+DEADR+L+M F ++ KIL +P++RH
Sbjct: 126 GGVDILIATPGRLMD-LHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRH 184
Query: 702 TYLFSATMTXKV 737
FSATM ++
Sbjct: 185 NLFFSATMPHEI 196
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 150 bits (363), Expect = 4e-35
Identities = 87/214 (40%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Frame = +3
Query: 108 QXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 287
+ E + T+ T D I +K L + + + +A EE + K + IQ +IP+ L+GK
Sbjct: 61 KSKEENEEKTKGTTSSFLTD-IEYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGK 119
Query: 288 DIIGLAETGSGKTGAFALPILQAL----LENPQRYFALILTPTRELAFQISEQFEALGAS 455
DI+ A TGSGKT AF +PI++ L + A+I++PTRELA Q + E + A
Sbjct: 120 DIMAKARTGSGKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAH 179
Query: 456 IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADR 635
+I+GG + L K I++ATPGRL+DH+ NTK F R LK LV+DEADR
Sbjct: 180 SERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADR 239
Query: 636 ILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
I+ + FE E+ +IL +P+ R T LFSAT + KV
Sbjct: 240 IMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKV 273
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 150 bits (363), Expect = 4e-35
Identities = 84/188 (44%), Positives = 116/188 (61%), Gaps = 4/188 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F L + L +A E+ ++ PS IQ IP L G D++G A+TG+GKT AFALP+L
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 354 AL---LENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLS 521
L ++NPQ L+L PTRELA Q++E F+ ++ G + GG MV Q L+
Sbjct: 105 RLDLAVKNPQ---VLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLA 161
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ H+I+ TPGR++DH+E K NL L LV+DEAD +L M F +V+ IL+ P ER
Sbjct: 162 RGAHVIVGTPGRVMDHIER-KSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQ 220
Query: 702 TYLFSATM 725
T LFSATM
Sbjct: 221 TALFSATM 228
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 150 bits (363), Expect = 4e-35
Identities = 86/230 (37%), Positives = 132/230 (57%), Gaps = 5/230 (2%)
Frame = +3
Query: 63 RKCLQXRKAMESATNQXSEVEQTPTENVTEDTEDDKIT-FKDLGVVDVLCEACEELKWKK 239
R+ + +K + A + E E + +++IT F + + L A L +
Sbjct: 120 REKKESKKKKKKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIY 179
Query: 240 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA----LILTPTR 407
P+ IQ IPVALLG+DI G A TG+GKT A+ LP L+ LL P A L+L PTR
Sbjct: 180 PTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTR 239
Query: 408 ELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG 587
EL Q+ + + L + + +GG+D+ AQ +L + P I+IATPGRL+DH++NT
Sbjct: 240 ELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPS 299
Query: 588 FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
F L ++ L++DEADR+L+ F ++ +I+ + + R T LFSATM+ +V
Sbjct: 300 FTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQV 349
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 149 bits (362), Expect = 5e-35
Identities = 79/169 (46%), Positives = 109/169 (64%)
Frame = +3
Query: 231 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRE 410
+KKP+ IQ AIP L G+D++ LA TGSGKT A+ LP+L+ L NP++ ALIL P RE
Sbjct: 20 FKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEKLGVNPEQK-ALILVPIRE 78
Query: 411 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 590
LA Q+SE +G ++G+ + GG+D Q L+ PHI++AT GRLVD N G
Sbjct: 79 LATQVSEAINQVGQALGLNAVCLCGGVDKEQQLQALATNPHILVATTGRLVDLANN--GL 136
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+L + YLV+DEADR+LNM F +V I I +R T +FSAT + ++
Sbjct: 137 DLSNIHYLVLDEADRLLNMGFWPDVQNIAGQISNQRQTAMFSATFSDEL 185
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 149 bits (360), Expect = 9e-35
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ + +A E+ + +PS IQ +AIP L G+D++ A+TG+GKT F LP+L
Sbjct: 5 MSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLL 64
Query: 351 QALL--ENPQ--RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+ L EN Q + AL+LTPTRELA Q++E + G + +K V+ GG+ + Q + L
Sbjct: 65 EILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMAL 124
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+ I+IATPGR++D L N K L+ LV+DEADR+L+M F ++ KIL +P++R
Sbjct: 125 RRGADILIATPGRMMD-LYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKR 183
Query: 699 HTYLFSATMTXKV 737
LFSAT + ++
Sbjct: 184 QNLLFSATFSPEI 196
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 149 bits (360), Expect = 9e-35
Identities = 77/176 (43%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
Frame = +3
Query: 228 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ-ALLENPQRY----FALI 392
++ +PS IQ +A+P+AL G+D++G AETGSGKT AF +P+LQ L++ P R AL+
Sbjct: 137 EYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALV 196
Query: 393 LTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDH 569
L PTRELA QI ++ +A S+ +K ++VGG ++ Q L I +ATPGR +DH
Sbjct: 197 LAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDH 256
Query: 570 LENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L+ +L + Y+V+DEADR+L+M FE ++ +I+R++P + T LFSATM ++
Sbjct: 257 LQQ-GNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEI 311
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 149 bits (360), Expect = 9e-35
Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF DLG+ + EA +L ++KPS IQ E IP L G+D++G+A+TGSGKT AF+LP+LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKP 530
L + L+L PTRELA Q++E + GV + GG Q L + P
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
I++ TPGRL+DHL+ +L L LV+DEAD +L M F +V+ I+ IP T L
Sbjct: 127 QIVVGTPGRLLDHLKRGT-LDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTAL 185
Query: 711 FSATM 725
FSATM
Sbjct: 186 FSATM 190
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 148 bits (359), Expect = 1e-34
Identities = 72/185 (38%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F ++G+ +L +A ++ + P+ +Q +AIP+AL GKDI+G A+TG+GKT AFA+P++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGV-KCAVIVGGMDMVAQALMLSKKP 530
LL P AL++ PTRELA Q++ + L V K A+++GG + Q L ++P
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRRP 122
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
I+I TPGR++DH+E K + LV+DE DR+ +M F ++++ I++ +P+ R +
Sbjct: 123 RIVIGTPGRIIDHIER-KTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLM 181
Query: 711 FSATM 725
FSAT+
Sbjct: 182 FSATL 186
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 148 bits (359), Expect = 1e-34
Identities = 79/169 (46%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Frame = +3
Query: 222 ELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ-RYFALILT 398
+L + P+ IQ++ IP AL G+D+IG+A+TG+GKT AF LPILQ L+ P+ R A+I+T
Sbjct: 18 DLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVT 77
Query: 399 PTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLEN 578
PTRELA QI EALG G++ + GG+ Q L + I + PGRL+DHLE
Sbjct: 78 PTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLER 137
Query: 579 TKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATM 725
L L L++DEAD++ +M F +V +ILR P +R T LFSATM
Sbjct: 138 GT-LTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLFSATM 185
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 148 bits (358), Expect = 2e-34
Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Frame = +3
Query: 114 SEVEQTPTE-NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKD 290
++++ P E ++ D E+ F D G + + +K P+ IQK AIP +LG+D
Sbjct: 34 TDIKSQPLEISIGNDNENG---FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRD 90
Query: 291 IIGLAETGSGKTGAFALPILQALLENPQ-RYFALILTPTRELAFQISEQFEALGA-SIGV 464
++G A+TG+GKT AFALP+++ L +N + L++TPTRELA Q++E F++ + S
Sbjct: 91 LLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNF 150
Query: 465 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 644
K I GG D Q L +K +++ TPGR++DH+ F + + LV+DEAD +LN
Sbjct: 151 KTIAIYGGTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGT-FKVNSINCLVLDEADEMLN 209
Query: 645 MDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
M F +++ I+ +P+ + LFSATM ++
Sbjct: 210 MGFLEDIEWIIDQLPKNKQMVLFSATMPNEI 240
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 148 bits (358), Expect = 2e-34
Identities = 80/199 (40%), Positives = 116/199 (58%)
Frame = +3
Query: 129 TPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAE 308
TP E +DT F LG+ D L A E+ + +P+ IQ +A+P L G+D+ G A+
Sbjct: 124 TPVEIPPQDT-----AFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQ 178
Query: 309 TGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
TG+GKT AFALPIL L + +R L+L PTRELA Q+ E F+ + V+ GG
Sbjct: 179 TGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGG 238
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
+ Q L + ++ ATPGRL+DH+E L ++ LV+DE DR+L+M F +V
Sbjct: 239 VGYGKQREDLQRGVDVVAATPGRLLDHIEQGT-MTLADVEILVLDEVDRMLDMGFLPDVK 297
Query: 669 KILRAIPRERHTYLFSATM 725
+I++ P+ R T FSAT+
Sbjct: 298 RIVQQCPQARQTLFFSATL 316
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 148 bits (358), Expect = 2e-34
Identities = 86/191 (45%), Positives = 116/191 (60%), Gaps = 8/191 (4%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ LG+ L E C + + P+ IQ + IP L G+ ++G A TGSGKT AFALPILQ
Sbjct: 4 FQRLGIQRWLSEQCTYMALETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPILQT 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L + FAL+LTP+RELA+QI +QF A GA + V+ + VGG+ Q L +PHI
Sbjct: 64 LAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVPTETQVDALKARPHI 123
Query: 537 IIATPGRLVDHL------ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP--R 692
+ ATPGRL HL E K F L+YLV+DEADR+ D +V +LR +P R
Sbjct: 124 VAATPGRL-RHLLEVFAPEVQKAF--AHLRYLVLDEADRLTEGDILRDVQSLLRLLPPTR 180
Query: 693 ERHTYLFSATM 725
+R +F+AT+
Sbjct: 181 QRRVLMFTATL 191
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 147 bits (357), Expect = 2e-34
Identities = 82/189 (43%), Positives = 113/189 (59%), Gaps = 2/189 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F + L +A E++K+ PS IQ + IP+ L G+D I LA+TG+GKT AFALPILQ
Sbjct: 8 FSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQN 67
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKKPH 533
L ALIL PTRELA Q++EQFE L V AV+ GG + Q L
Sbjct: 68 LSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQ 127
Query: 534 IIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
+++ TPGR++DH++ KG L LK ++DEAD +L M F +V+ IL +P ++ L
Sbjct: 128 VVVGTPGRILDHID--KGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMAL 185
Query: 711 FSATMTXKV 737
FSATM ++
Sbjct: 186 FSATMPYRI 194
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 147 bits (357), Expect = 2e-34
Identities = 79/192 (41%), Positives = 117/192 (60%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DL + L A +E + KP+ IQ ++IP+ L G+D++GLA+TG+GKT +FALP+L
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 357 LLENPQ-----RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L P+ L+L PTREL QI++ FE+ V+ I GG+ V Q L
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALE 128
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ II+A PGRL+D +E +L L+ LV+DEAD++L+M F +++I+ +P +RH
Sbjct: 129 EGVDIIVAAPGRLLDLIEQGL-CDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRH 187
Query: 702 TYLFSATMTXKV 737
T LFSATM +
Sbjct: 188 TVLFSATMPKSI 199
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 147 bits (357), Expect = 2e-34
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 6/222 (2%)
Frame = +3
Query: 90 MESATNQXSEVEQTPTENVTEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQ 254
+ES+T + S E + TE E T D+ + F G + L + + + PS IQ
Sbjct: 39 IESSTAEPSTTEASTTEVTAEVTADEAKSEPQSGFDGFGFSEALLKTLADKGYSDPSPIQ 98
Query: 255 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 434
K A P +LG+D++G A+TG+GKT AFALP+L+ L + L+L PTRELA Q+++
Sbjct: 99 KAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADS 158
Query: 435 FEALGAS-IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKY 611
F+A A +K + GG D +Q L + +++ TPGR++DH+ + L
Sbjct: 159 FKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGT-LDTSGLTS 217
Query: 612 LVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
LV+DEAD +L M F +V+ IL +P+ER LFSATM ++
Sbjct: 218 LVLDEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPPEI 259
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 147 bits (356), Expect = 3e-34
Identities = 79/191 (41%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Frame = +3
Query: 168 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
K +F + + + A L ++ P+++Q E IPVAL KD++ ++TGSGKT +F +P+
Sbjct: 3 KKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPL 62
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
+ + + AL+LTPTRELA Q+ E +G +K A I G Q L L +K
Sbjct: 63 CEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQK 122
Query: 528 PHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
HI++ TPGR++DH+E KG +L LKYLV+DEAD +LNM F +V+ I+ +P +R T
Sbjct: 123 THIVVGTPGRVLDHIE--KGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT 180
Query: 705 YLFSATMTXKV 737
LFSAT+ V
Sbjct: 181 MLFSATLPEDV 191
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 147 bits (356), Expect = 3e-34
Identities = 87/220 (39%), Positives = 131/220 (59%), Gaps = 5/220 (2%)
Frame = +3
Query: 93 ESATNQXSEVEQTPTENV-TEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIP 269
++A+ VE P V T++T + F+DL + + L + +EL + ++IQ + IP
Sbjct: 119 DAASGANHNVEGNPPSKVETKETFYSQTKFEDLDICEALKKGLKELNFVTLTEIQAKCIP 178
Query: 270 VALLGKDIIGLAETGSGKTGAFALPILQALLEN---PQRYFA-LILTPTRELAFQISEQF 437
L GKDI+G A+TGSGKT AF +P + L P+ LI++PTREL QI +
Sbjct: 179 HFLNGKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQVC 238
Query: 438 EALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
+ L I +I+GGM + +I+IATPGRL+DH++NTK F + L L+
Sbjct: 239 KDLCKYIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFIYKNLISLI 298
Query: 618 MDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+DEADR+L + FE E++ I++ +P++R T LFSAT T KV
Sbjct: 299 IDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKV 338
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 147 bits (355), Expect = 4e-34
Identities = 73/188 (38%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 344
DKITF DLG+ + + +A +L ++ PS IQ+ IP L G D++G+A+TGSGKT AFALP
Sbjct: 3 DKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALP 62
Query: 345 ILQALLENPQRYFALILTPTRELAFQISEQFEA-LGASIGVKCAVIVGGMDMVAQALMLS 521
+L + + + L++ PTRELA Q+++ E + + G + + GG Q L
Sbjct: 63 LLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALK 122
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ +++ TPGR++DH+ NL L+++V+DEAD +L M F +V+ ++ +P
Sbjct: 123 QGAQVVVGTPGRILDHIRRGT-LNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQ 181
Query: 702 TYLFSATM 725
T LFSATM
Sbjct: 182 TALFSATM 189
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 146 bits (354), Expect = 5e-34
Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Frame = +3
Query: 204 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF 383
L +A E+ +K+P+ IQ++AIP+AL G DI+G A TG+GKTGAFA+PI++ L +
Sbjct: 11 LQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVK 70
Query: 384 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA-LMLSKKPHIIIATPGRL 560
AL+LTPTRELA Q+ EQ L + V GG + ++ +K I+I TPGR+
Sbjct: 71 ALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRI 130
Query: 561 VDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
D L + K NL ++YLV+DE D++L+M F +++ I+ +P+ER TY+FSAT+ ++
Sbjct: 131 KD-LIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSATVPSRI 188
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 146 bits (354), Expect = 5e-34
Identities = 81/195 (41%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
D + +F DLG+ + + + ++ P IQ + IP+ L G D++G+A TGSGKT AF L
Sbjct: 3 DSENSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLL 62
Query: 342 PILQALLENPQRYF-ALILTPTRELAFQISE--QFEALGASIGVKCAVIVGGMDMVAQAL 512
P+LQ ++ QR+ LI+ PTRELA QI + S + AV+ GG + Q
Sbjct: 63 PLLQN-IDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFN 121
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L K PHIII TPGRL+DHL ++G ++ LK L++DEAD +L M F +++ I+R +P
Sbjct: 122 DLKKNPHIIIGTPGRLLDHL--SRGLDISKLKTLIIDEADEMLRMGFIEDIEHIIRYVPT 179
Query: 693 ERHTYLFSATMTXKV 737
R T LFSAT+ +
Sbjct: 180 HRQTALFSATLPVSI 194
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 146 bits (354), Expect = 5e-34
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ L +++ +A +EL + + IQ IP + G D+IG A+TG+GKT AF +PI++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 533
+ Q+ +LIL PTREL Q+ E+ + L ++ AV+ GG Q L KPH
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+IIATPGR +DHLE K +L LK L +DEAD +L M F+ ++ IL+ IP ER T LF
Sbjct: 125 LIIATPGRAIDHLERGK-IDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLF 183
Query: 714 SATM 725
SAT+
Sbjct: 184 SATL 187
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 146 bits (354), Expect = 5e-34
Identities = 77/192 (40%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ + A E ++ + +Q++AIP G+D++ A+TG+GKT AFALPILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 357 LLENPQRYF-----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
+ E P ALILTPTRELA Q+++ A + + I GGM M QA L
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ II+ATPGRL++H+ +L +++LV+DEADR+L+M F ++ KIL+A+ ++R
Sbjct: 123 QGADIIVATPGRLLEHIV-ACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKRQ 181
Query: 702 TYLFSATMTXKV 737
LFSAT + V
Sbjct: 182 NLLFSATFSTAV 193
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 146 bits (354), Expect = 5e-34
Identities = 76/191 (39%), Positives = 116/191 (60%), Gaps = 1/191 (0%)
Frame = +3
Query: 168 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
K F D + D L ++ L ++ P+K+Q++ IP L KDII ++TGSGKT AFA+PI
Sbjct: 3 KSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPI 62
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
Q + + + AL+L PTRELA Q+ E +G +K A + G Q L +K
Sbjct: 63 CQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQK 122
Query: 528 PHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
H+++ TPGR++DH+E KG F+ +KYLV+DEAD + NM F +++ I++ + ++R T
Sbjct: 123 THVVVGTPGRIIDHME--KGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVT 180
Query: 705 YLFSATMTXKV 737
L SATM +
Sbjct: 181 MLLSATMPSAI 191
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 146 bits (354), Expect = 5e-34
Identities = 79/184 (42%), Positives = 116/184 (63%), Gaps = 1/184 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL-GKDIIGLAETGSGKTGAFALPILQ 353
F LG+ + + E +K+PS IQ++AIPV L DIIG A+TG+GKT AF LPI+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
+ ++ ALIL PTRELA Q++E+ ++ G+ + GG ++ Q L K
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+++ATPGR + +E+ K L L+YLV+DEAD +LNM F +V+K+L+A P +R +F
Sbjct: 124 LVVATPGRCIHFIEDGK-LELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMF 182
Query: 714 SATM 725
SATM
Sbjct: 183 SATM 186
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 146 bits (353), Expect = 7e-34
Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ + +A E + PS IQ +AIP L GKD++ A+TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 351 QALLENPQ----RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+ L + + + AL+LTPTRELA Q+SE E G + ++ AV+ GG+ + Q L
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+++ATPGRL+D LE K L+ LV+DEADR+L+M F ++ KIL +P +R
Sbjct: 121 RHGVDVLVATPGRLLD-LEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKR 179
Query: 699 HTYLFSATMTXKV 737
+FSAT + ++
Sbjct: 180 QNLMFSATFSDEI 192
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 145 bits (352), Expect = 9e-34
Identities = 82/201 (40%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Frame = +3
Query: 150 EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 329
E T+++ F LG+ VL + E +P IQ +AIP L G+DI+G+A+TGSGKT
Sbjct: 80 ELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTA 139
Query: 330 AFALPILQALL-----ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 494
AF+LPILQ ++ P+ ALIL PTRELA QI + + S + A+++GG+
Sbjct: 140 AFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVS 199
Query: 495 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKI 674
++Q ++ ++IATPGRL D + + +L ++LV+DEADR+L+M F +V +I
Sbjct: 200 KLSQIKRIAPGIDVLIATPGRLTDLMRDGL-VDLSQTRWLVLDEADRMLDMGFINDVKRI 258
Query: 675 LRAIPRERHTYLFSATMTXKV 737
+A ER T LFSATM ++
Sbjct: 259 AKATHAERQTALFSATMPKEI 279
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 145 bits (352), Expect = 9e-34
Identities = 78/193 (40%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TF D L ++ + + KP+ IQ EAIPV + D++ A+TG+GKT A+ LPIL
Sbjct: 1 MTFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPIL 60
Query: 351 QALLE-NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA---QALML 518
++E N L+L PTRELA QI +Q E I V + GG D Q L
Sbjct: 61 HKIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKAL 120
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+ +I+IATPGRL+ L++ NL+ +K+LV+DEADR+L+M F ++ +++ +P ER
Sbjct: 121 TDGANIVIATPGRLLAQLQSGTA-NLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTER 179
Query: 699 HTYLFSATMTXKV 737
T +FSATM K+
Sbjct: 180 QTIMFSATMPTKM 192
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 145 bits (352), Expect = 9e-34
Identities = 75/187 (40%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
I + D+ + + A E ++ +PS IQ IP+AL G+D++G A TG+GKT AF +PI+
Sbjct: 4 INYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPII 63
Query: 351 QALLENP--QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
+ L P + ALILTPTRELA Q+ ++ L + + GG + +Q L +
Sbjct: 64 ERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKR 123
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
PHI++ TPGR++D L + L L+ +V+DEADR+L++ F +++KILR P ER T
Sbjct: 124 APHIVVGTPGRVID-LMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQT 182
Query: 705 YLFSATM 725
L SAT+
Sbjct: 183 LLLSATV 189
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 145 bits (351), Expect = 1e-33
Identities = 76/183 (41%), Positives = 114/183 (62%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F + + + +A L + +P+ IQ++ IP+AL GKDII ++TGSGKT AFA+PI ++
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
++ AL+L PTRELA+Q+ ++ +G VK V+ GG QAL L +K HI
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHI 125
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
++ TPGR++DH E T +KY+++DEAD +L+M F +V +IL +P LFS
Sbjct: 126 VVGTPGRVLDHCE-TGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENITIMLFS 184
Query: 717 ATM 725
ATM
Sbjct: 185 ATM 187
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 145 bits (351), Expect = 1e-33
Identities = 76/192 (39%), Positives = 117/192 (60%), Gaps = 3/192 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++++ L + L A L WK P+ +Q++ IP+ L G+D + A TGSGKTGAF +P+L
Sbjct: 1 MSWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLL 60
Query: 351 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
+ ++ + + ALIL+PTRELA Q + + L + +++GG D QA L
Sbjct: 61 ERMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLR 120
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+P II+ATPGRL+D + NT F+L ++ LV+DE D++L++ F E+ +I P R
Sbjct: 121 TEPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPVARQ 180
Query: 702 TYLFSATMTXKV 737
T LFSATM +V
Sbjct: 181 TLLFSATMEKEV 192
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 144 bits (350), Expect = 2e-33
Identities = 82/191 (42%), Positives = 121/191 (63%), Gaps = 3/191 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK--DIIGLAETGSGKTGAFALPI 347
TF++LGV + +A EE+ ++ P +Q+E IP LLG+ D++ LA+TG+GKT AF LP+
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPY-LLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 524
LQ + + +LIL PTREL QI+ I G+K + GG + +Q L +
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
HII+ATPGRL+D +E K +L + +VMDEAD +LNM F ++ IL +P+ER+T
Sbjct: 122 GVHIIVATPGRLLDLMER-KTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNT 180
Query: 705 YLFSATMTXKV 737
LFSATM+ ++
Sbjct: 181 LLFSATMSPEI 191
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 144 bits (350), Expect = 2e-33
Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF G+ + L A L+ P+ IQ+ AIP AL G+D++G+A+TG+GKT AFALP+L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 354 ALL-----ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
L+ + ALIL+PTRELA QI+E L + V+ GG+ + Q L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
++ I++ATPGRL+D +E + +LR ++L++DEADR+L+M F +V KI+ P +R
Sbjct: 125 ARGVDILVATPGRLLDLMEQ-RAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDR 183
Query: 699 HTYLFSATM 725
+ +FSATM
Sbjct: 184 QSMMFSATM 192
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 144 bits (350), Expect = 2e-33
Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Frame = +3
Query: 120 VEQTPTENVTEDTEDDK-ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDII 296
+ + T T+D + K TF+D + L E ++KPS IQ+EAIPVA+ G+DI+
Sbjct: 28 IPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDIL 87
Query: 297 GLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAV 476
A+ G+GKT AF +P L+ + + ALI+ PTRELA Q S+ LG G+ C V
Sbjct: 88 ARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMV 147
Query: 477 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 656
GG ++ L L++ HI++ TPGR++D L + K +L +MDEAD++L+ DF+
Sbjct: 148 TTGGTNLRDDILRLNETVHILVGTPGRVLD-LASRKVADLSDCSLFIMDEADKMLSRDFK 206
Query: 657 VEVDKILRAIPRERHTYLFSATMTXKV 737
+++IL +P + LFSAT V
Sbjct: 207 TIIEQILSFLPPTHQSLLFSATFPLTV 233
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 144 bits (349), Expect = 2e-33
Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F L + L +A +EL + +P+ IQ +AIP A+ G+D++ A TGSGKT AF LPIL
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 357 LLENPQ-RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L++ P+ AL++TPTRELA QI E L + A + GG+ + Q +
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
++I TPGRL+DH L L++LV+DEADR+L+M F ++ +IL+ IP R T F
Sbjct: 123 VLIGTPGRLLDHFRAPYA-KLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFF 181
Query: 714 SATMTXKV 737
SATM +
Sbjct: 182 SATMPAPI 189
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 144 bits (349), Expect = 2e-33
Identities = 80/191 (41%), Positives = 123/191 (64%), Gaps = 6/191 (3%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ + +A E+ + P IQ++AIP L GKDI+G+A+TGSGKT +F LPIL
Sbjct: 9 MSFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPIL 68
Query: 351 QALLENP---QRYF-ALILTPTRELAFQISEQFEALGASI--GVKCAVIVGGMDMVAQAL 512
Q L P R+ AL+L PTRELA Q+ + F+A ++ +K + GG+ + Q +
Sbjct: 69 QMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMI 128
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L + I+IATPGRL+D L ++K L ++ LV+DEAD++LN+ F+ E+ I + +P+
Sbjct: 129 QL-QGVEILIATPGRLLD-LVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQ 186
Query: 693 ERHTYLFSATM 725
+R LFSAT+
Sbjct: 187 KRQNLLFSATL 197
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 144 bits (349), Expect = 2e-33
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DL + + L +EL ++ PS IQ IP+ L +D++G A+TG+GKT +FALPIL
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 533
+ AL+L PTRELA Q++E F+ I G I GG AQ L + H
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+++ TPGR++DHLE +L +K +V+DEAD +L M F +V+ IL+ P R T LF
Sbjct: 129 VVVGTPGRVIDHLEK-GSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALF 187
Query: 714 SATMTXKV 737
SATM +
Sbjct: 188 SATMPSAI 195
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 144 bits (349), Expect = 2e-33
Identities = 79/188 (42%), Positives = 121/188 (64%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+FK LG+ D + + E+ K+++P++IQK AIP+ L GKDIIG A TGSGKT AF I+Q
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
+E AL+LTPTRELA Q+ + ++ A I GG+ + Q L ++
Sbjct: 63 K-IEKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQL-ERAD 120
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+++ATPGRL+DH+E +L ++ LV+DEADR+L+M F +V++I+ P +R T +F
Sbjct: 121 VVVATPGRLLDHIERGT-IDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMF 179
Query: 714 SATMTXKV 737
SAT++ +
Sbjct: 180 SATVSKDI 187
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 144 bits (348), Expect = 3e-33
Identities = 69/190 (36%), Positives = 120/190 (63%)
Frame = +3
Query: 168 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
K TF+ + + + ++ + L + PS++Q+E IP L G++++ ++TGSGKT +FA+P+
Sbjct: 2 KYTFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPL 61
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
+ + + ALI+ PTRELA Q+ ++ +G V+C+ I G + Q L ++
Sbjct: 62 CENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR 121
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
HI++ATPGR++DH+ N L +KYLV+DEAD++ N F +++KIL +P+E+
Sbjct: 122 VHIVVATPGRILDHI-NRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVS 180
Query: 708 LFSATMTXKV 737
LFSAT+ ++
Sbjct: 181 LFSATIDEEI 190
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 144 bits (348), Expect = 3e-33
Identities = 71/184 (38%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
FKDLG+ + EA E + + + + IQ++ IP+ + GKD+ G A+TG+GKT AF +P ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKKPH 533
+ + + +LIL PTRELA Q+ + + L G++ + GG + Q L H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
I++ TPGR++DHL+ + N L +++DEAD +LNM F +++ IL +P ER T LF
Sbjct: 123 IVVGTPGRIIDHLDR-RTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLF 181
Query: 714 SATM 725
SAT+
Sbjct: 182 SATL 185
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 144 bits (348), Expect = 3e-33
Identities = 78/203 (38%), Positives = 130/203 (64%), Gaps = 2/203 (0%)
Frame = +3
Query: 135 TENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVAL-LGKDIIGLAET 311
T +V ++T++ + F+D G+ + + A ++ ++KP++IQK +P AL KD+I A+T
Sbjct: 7 TGSVLDETKNYE-RFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQT 65
Query: 312 GSGKTGAFALPILQALLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
G+GKT AF +P+L+ + ++ A+I+TPTRELA QI E+ ++L + VK + GG
Sbjct: 66 GTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGG 125
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
+ Q L K I++ TPGR++DHL N +L ++YLV+DEADR+L+M F +V
Sbjct: 126 QSLEKQFKDLEKGVDIVVGTPGRIIDHL-NRDTLDLSHVEYLVLDEADRMLDMGFLDDVL 184
Query: 669 KILRAIPRERHTYLFSATMTXKV 737
+I++ + T+LFSATM ++
Sbjct: 185 EIIKRTGENKRTFLFSATMPKEI 207
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 144 bits (348), Expect = 3e-33
Identities = 76/203 (37%), Positives = 124/203 (61%), Gaps = 5/203 (2%)
Frame = +3
Query: 144 VTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 323
+ D +TF++L + D + + + KW+KP+ IQ +IPVAL G D+IG+A+TGSGK
Sbjct: 116 LASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGK 175
Query: 324 TGAFALPILQAL-LENPQRY----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
T AF +P + + L+ P L+L+PTRELA QI+E + ++ ++ + GG
Sbjct: 176 TAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGG 235
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
QA L P +++ATPGRL+D +E + + + +LV+DEAD++L+M FE ++
Sbjct: 236 AGRGPQANDLRHLPSLVVATPGRLIDFIEGGQ-CPMNRVNFLVLDEADQMLDMGFEPQIR 294
Query: 669 KILRAIPRERHTYLFSATMTXKV 737
KI+ I ++R T +FSAT ++
Sbjct: 295 KIIGHISKDRQTMMFSATWPKEI 317
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 144 bits (348), Expect = 3e-33
Identities = 76/184 (41%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
FK+ + + A E L + +P+K+Q+ IP AL KD++ ++TGSGKT +F +P+ +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
+ + ALILTPTRELA Q+ E +G +K + G Q L +K HI
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 537 IIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
++ TPGR++DH+E KG L L YLV+DEAD +LNM F +V+ I++ +P ER T LF
Sbjct: 124 VVGTPGRVLDHIE--KGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLF 181
Query: 714 SATM 725
SAT+
Sbjct: 182 SATL 185
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 143 bits (347), Expect = 3e-33
Identities = 75/185 (40%), Positives = 115/185 (62%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
I F +L + + + +A E+ +++PS IQ +AIP L G D+IG A+TG+GKT AF +P++
Sbjct: 6 IKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV 65
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ + + ALILTPTRELA Q+S + + L ++ I GG +V Q L +
Sbjct: 66 EKV-STGRHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGV 124
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
++I TPGR++DHL K L + +++DEAD +L+M F +++ ILR + ER T L
Sbjct: 125 QVVIGTPGRIIDHLRR-KTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQTLL 183
Query: 711 FSATM 725
FSATM
Sbjct: 184 FSATM 188
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 143 bits (347), Expect = 3e-33
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 6/194 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF +LG+ L + +L + P+ IQ++AIP L G+D++ A+TG+GKT A+ LP++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 354 ALLEN------PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 515
L P+ ALIL PTRELA Q+ + + + + GG + Q
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 516 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE 695
L+K I+IATPGRL+DHL TK +L L+ LV+DEADR+L+M F ++ +I++ +P E
Sbjct: 124 LAKGVDILIATPGRLLDHL-FTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEE 182
Query: 696 RHTYLFSATMTXKV 737
R T LFSAT +V
Sbjct: 183 RQTLLFSATFETRV 196
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 143 bits (347), Expect = 3e-33
Identities = 75/191 (39%), Positives = 117/191 (61%), Gaps = 3/191 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF DL + + +A E ++ P+ IQ AIP AL G+D++G+A+TG+GKT +F LP++
Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71
Query: 354 ALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L R +L+L PTRELA Q++E F+ + + A+++GG+ Q + K
Sbjct: 72 MLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDK 131
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
++IATPGRL+DH E K L +K +V+DEADR+L+M F ++++I +P R T
Sbjct: 132 GVDVLIATPGRLLDHFERGK-LILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTRQT 190
Query: 705 YLFSATMTXKV 737
FSATM ++
Sbjct: 191 LFFSATMAPEI 201
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 143 bits (347), Expect = 3e-33
Identities = 78/189 (41%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F +LG+ L +A ++L + KP+ +Q + IP L GKDI+ A+TGSGKT AF LP+L
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 357 LLENPQ---RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
L +P+ ALIL PTRELA Q + FE +K +I+GG Q + K
Sbjct: 63 FLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRKN 122
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
P +++ATPGRLV+H++N + L++LV+DE+DR+L+M F+ + I ER
Sbjct: 123 PEVLVATPGRLVEHIKN-GNVDFSDLEFLVLDESDRMLDMGFQENMLAIAAVCNEERQNL 181
Query: 708 LFSATMTXK 734
LFSAT+ K
Sbjct: 182 LFSATLKHK 190
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 143 bits (347), Expect = 3e-33
Identities = 81/203 (39%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F DL + +L ELK+++P+ IQ +AIPV L GKD++ A+TG+GKT AFALP+L
Sbjct: 1 MSFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLL 60
Query: 351 QALLE--------------NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
LL N AL+L PTRELA Q+ E V ++ GG
Sbjct: 61 HQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGG 120
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
+ + Q L+ HI++ATPGRL+D L + +L L +LV DEADR+L+M F+ E+
Sbjct: 121 VSIGEQIRQLANGTHILVATPGRLLDLLRK-RALSLSQLTHLVFDEADRMLDMGFKDEIV 179
Query: 669 KILRAIPRERHTYLFSATMTXKV 737
++L+ +P R T LFSAT+ ++
Sbjct: 180 EVLKRLPSTRQTLLFSATLDDRM 202
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 143 bits (347), Expect = 3e-33
Identities = 80/209 (38%), Positives = 126/209 (60%), Gaps = 8/209 (3%)
Frame = +3
Query: 135 TENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETG 314
T + E+ +TF D + + +A + + +P+ IQ +AIPV + G D++G A+TG
Sbjct: 8 TISAAEEAALANVTFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTG 67
Query: 315 SGKTGAFALPILQALL----EN--PQRY--FALILTPTRELAFQISEQFEALGASIGVKC 470
+GKT F+LPIL L+ EN P R+ ALILTPTRELA Q++ ++
Sbjct: 68 TGKTAGFSLPILNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRS 127
Query: 471 AVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 650
V+ GG+D+ Q L + ++IATPGRL+DH++ K NL ++ LV+DEADR+L+M
Sbjct: 128 TVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQ-KSINLGQVQVLVLDEADRMLDMG 186
Query: 651 FEVEVDKILRAIPRERHTYLFSATMTXKV 737
F ++ +I+ +P+ R LFSAT + ++
Sbjct: 187 FLPDLQRIINLLPKTRQNLLFSATFSPEI 215
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 143 bits (347), Expect = 3e-33
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 4/235 (1%)
Frame = +3
Query: 45 KTMLIYRKCLQXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEE 224
K + +K Q K E EVEQ E + + + + F+D + E ++
Sbjct: 37 KEKRLLKKRKQDLKGQEET--MLDEVEQKYQEMLKKSSRTF-LRFEDFPLSWRTLEGLKD 93
Query: 225 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYF-ALI 392
+ KP++IQ++ I +L G D++G A+TGSGKT A +P+L+AL +P ALI
Sbjct: 94 NDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALI 153
Query: 393 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL 572
++PTRELA Q A+GA G C +++GG D+ + +S +II+ TPGRL+ H+
Sbjct: 154 ISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRISGI-NIIVCTPGRLLQHM 212
Query: 573 ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+ + L+ LV+DEADR+L+M F +++ I+ +P ER T LFSAT T V
Sbjct: 213 DENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNV 267
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 143 bits (347), Expect = 3e-33
Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 8/205 (3%)
Frame = +3
Query: 147 TEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKT 326
++ T D + +F + + A L + KP+ IQ IP+AL GKDI+ A TGSGKT
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKT 384
Query: 327 GAFALPILQALL-------ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVG 485
AF +P ++ L + + LIL PTRELA Q +++ ++ + VG
Sbjct: 385 AAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVG 444
Query: 486 GMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 665
G+ + +Q L +P ++IATPGRL+DH+ N+ F L ++ LVMDEADR+L F E+
Sbjct: 445 GLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADEL 504
Query: 666 DKILRAIPR-ERHTYLFSATMTXKV 737
++I+++ P+ R T LFSATMT V
Sbjct: 505 NEIVKSCPKGARQTMLFSATMTDDV 529
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 143 bits (346), Expect = 5e-33
Identities = 71/187 (37%), Positives = 117/187 (62%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
FK LG++ L +A +L ++ P+ IQKEAIP+ L G +++G A TG+GKT A+ LP+LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
++ ++ LI+TPTRELA Q++++ LG + V+ + GG + Q L + +
Sbjct: 64 -IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
I+ TPGR++DH+ K F +K +++DEAD +L+M F +++ IL + + T LFS
Sbjct: 123 IVGTPGRILDHI-GRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFS 181
Query: 717 ATMTXKV 737
AT+ +
Sbjct: 182 ATLPAPI 188
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 143 bits (346), Expect = 5e-33
Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F LG+ + A + +++PS IQ +AIPV L G D+IG A+TG+GKT AFALP+L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 533
+ + LIL PTRELA Q++ FE + + GV + GG M Q L +
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
I++ATPGRL DHL + L +K+LV+DEAD +L + F +++ I A+P R T LF
Sbjct: 145 ILVATPGRLCDHLRRDEQL-LSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLF 203
Query: 714 SATMTXKV 737
SAT+ +
Sbjct: 204 SATLPHSI 211
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 143 bits (346), Expect = 5e-33
Identities = 81/190 (42%), Positives = 120/190 (63%), Gaps = 7/190 (3%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+D G+ L + E L +++ +++Q+ AIP+ L G DI+ ++TGSGKT A+ LPILQ
Sbjct: 3 FQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQR 62
Query: 357 LLENPQRYF------ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+L+ QR F A+IL PTRELA Q+ + LG S+ + +I+G Q +L
Sbjct: 63 MLK--QRRFEHRAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEKLL 120
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR-E 695
K P ++IATPGRL+DH+ K +L L++LV+DEADR+L+M F +V I + P +
Sbjct: 121 RKNPEVLIATPGRLLDHIRE-KSISLEHLEFLVLDEADRMLDMGFRDDVSAISNSAPNVK 179
Query: 696 RHTYLFSATM 725
R T LFSAT+
Sbjct: 180 RQTMLFSATL 189
>UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 143 bits (346), Expect = 5e-33
Identities = 78/196 (39%), Positives = 120/196 (61%), Gaps = 5/196 (2%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 344
DK+ F DL + D+ A ++ + ++IQ +IP +LG D++ A+TGSGKT AF +P
Sbjct: 85 DKL-FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIP 143
Query: 345 ILQALLE---NPQRYFALI-LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
++ L +P+ +I L PTRELA Q + L ++GG+D+ +A
Sbjct: 144 AIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAE 203
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L+K ++++ATPGRL+DH++ TK F LK L++DEADRIL +FE ++ +I + +PR
Sbjct: 204 QLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPR 263
Query: 693 E-RHTYLFSATMTXKV 737
+ R T LFSAT T KV
Sbjct: 264 QGRQTVLFSATQTEKV 279
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 143 bits (346), Expect = 5e-33
Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
I+F G + + + +L++ +P++IQ +A+P+AL G+DIIG+A+TGSGKT AF P L
Sbjct: 106 ISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 165
Query: 351 QALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 515
+++ P+ LI PTREL QI + G + + + GG + Q+
Sbjct: 166 VHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKA 225
Query: 516 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE 695
L + I++ATPGRL+DH++ K NL + YLV DEADR+ +M FE +V I + +
Sbjct: 226 LQEGAEIVVATPGRLIDHVK-AKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPD 284
Query: 696 RHTYLFSATMTXKV 737
R T LFSAT KV
Sbjct: 285 RQTLLFSATFKKKV 298
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 143 bits (346), Expect = 5e-33
Identities = 76/193 (39%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF+D G + A ++ ++KP+ IQ +A+P+ L G+D+IG+A+TGSGKT AF LP++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 354 ALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+++ P+ +I PTRELA QI + + + G++ + + GGM Q L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
I++ATPGRL+D L+ K + YLV+DEADR+ ++ FE +V I+ I +R
Sbjct: 349 KAGCEIVVATPGRLIDMLK-MKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 407
Query: 699 HTYLFSATMTXKV 737
T LFSATM KV
Sbjct: 408 QTLLFSATMPWKV 420
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 143 bits (346), Expect = 5e-33
Identities = 76/188 (40%), Positives = 118/188 (62%), Gaps = 8/188 (4%)
Frame = +3
Query: 150 EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 329
+D + +++ G+ + + +++ +K+PS IQ+ AIPV L KD+IG+AETGSGKT
Sbjct: 242 DDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTA 301
Query: 330 AFALPILQALLENPQRY--------FALILTPTRELAFQISEQFEALGASIGVKCAVIVG 485
AF +P++ A+ + P +A++L PTRELA QI + +G +C +VG
Sbjct: 302 AFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVG 361
Query: 486 GMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 665
G Q+ +S+ HI++ATPGRL+D LE + F L Y+VMDEADR+L+M FE +V
Sbjct: 362 GHAFEEQSFQMSQGAHIVVATPGRLLDCLER-RLFVLSQCTYVVMDEADRMLDMGFEDDV 420
Query: 666 DKILRAIP 689
+KIL ++P
Sbjct: 421 NKILSSLP 428
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 143 bits (346), Expect = 5e-33
Identities = 77/194 (39%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Frame = +3
Query: 159 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAF 335
E + + F +L + D + A ++KP+ IQ + IP+ L + +I+ A TGSGKT +F
Sbjct: 2 EVEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASF 61
Query: 336 ALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 515
A+P+++ + EN A+ILTPTRELA Q++++ E+L + +K A I GG + Q
Sbjct: 62 AIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKA 120
Query: 516 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE 695
L K +I++ TPGR++DH+ N NL+ +KY ++DEAD +LNM F +V+KIL A ++
Sbjct: 121 L-KNANIVVGTPGRILDHI-NRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKD 178
Query: 696 RHTYLFSATMTXKV 737
+ LFSATM ++
Sbjct: 179 KRILLFSATMPREI 192
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 142 bits (345), Expect = 6e-33
Identities = 75/186 (40%), Positives = 113/186 (60%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F + + + ++ +E+ ++KP+KIQ+ +P A GKDIIG A+TG+GKT AFA+PIL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L + R L++ PTRELA QI +Q LG K A+I+GG+ Q L+ +I
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
++ATPGRL D L K +L +K +DEAD +L + F E+ KI+ +P++R + F+
Sbjct: 123 VVATPGRLEDLLAQNK-IDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFT 181
Query: 717 ATMTXK 734
AT K
Sbjct: 182 ATFDEK 187
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 142 bits (345), Expect = 6e-33
Identities = 78/188 (41%), Positives = 116/188 (61%), Gaps = 3/188 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F DLG+ L +A EL +++P+ +Q AIP L+ +D+I +A+TG+GKT +F LP++
Sbjct: 1 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
Query: 351 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L R +LIL PTRELA Q++E FE G + ++++GG+ M Q L
Sbjct: 61 DILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALE 120
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
K ++IATPGRL+D E K L + LV+DEADR+L+M F +++ I +P R
Sbjct: 121 KGVDVLIATPGRLLDLFERGK-ILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQ 179
Query: 702 TYLFSATM 725
T LFSATM
Sbjct: 180 TLLFSATM 187
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 142 bits (345), Expect = 6e-33
Identities = 72/189 (38%), Positives = 117/189 (61%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F + + + A +++ ++ + IQ +PV L G D++G A+TG+GKT AFA+P+L
Sbjct: 4 LEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVL 63
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ L E + ALI+ PTREL Q+SE+ + +G + VK + GG + Q L +
Sbjct: 64 ENL-EAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGV 122
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
H+I+ATPGRL+DH+E +L + +V+DEAD +LNM F ++++IL +P R T L
Sbjct: 123 HVIVATPGRLIDHIERGT-VDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTML 181
Query: 711 FSATMTXKV 737
FSAT++ +
Sbjct: 182 FSATVSKPI 190
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 142 bits (344), Expect = 8e-33
Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F +LG+ + + A + P+ IQ++AIP L KD++G+A+TG+GKT AF LP+L
Sbjct: 1 MSFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPML 60
Query: 351 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L + R LIL PTRELA Q+ E F+ GA + A+++GG+ Q L+
Sbjct: 61 TILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLT 120
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ ++IATPGRL+DH E G L ++ LV+DEADR+L+M F ++++I + +P R
Sbjct: 121 RGVDVLIATPGRLLDHTER-GGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQ 179
Query: 702 TYLFSATMTXKV 737
T F+ATM ++
Sbjct: 180 TLFFTATMPPEI 191
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 142 bits (344), Expect = 8e-33
Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+FKDL + + L +A EEL + +PS IQ AIP L G+D+IG A+TG+GKT AF LP+LQ
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKP 530
+ + AL+L PTRELA Q++ AL + GV+ + GG + QA L +
Sbjct: 66 RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA 125
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
+++ TPGR++DH+ N L ++ V+DEAD +L+M F ++++IL +P +
Sbjct: 126 QVVVGTPGRILDHI-NRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSAF 184
Query: 711 FSATM 725
FSATM
Sbjct: 185 FSATM 189
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 142 bits (344), Expect = 8e-33
Identities = 73/194 (37%), Positives = 118/194 (60%), Gaps = 5/194 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG++D L ++L ++ P+ +Q +AIP L GKD++ A+TG+GKT FALP+L
Sbjct: 1 MSFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 60
Query: 351 QALLE-----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 515
Q L++ + R L+L PTRELA Q+ + F A G + ++ GG+ + Q +
Sbjct: 61 QRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMK 120
Query: 516 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE 695
L K +++ATPGRL+D L ++ LV+DEADR+L++ F E++ + A+P +
Sbjct: 121 LRKGVDVLVATPGRLLD-LNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQ 179
Query: 696 RHTYLFSATMTXKV 737
R T LFSAT + +
Sbjct: 180 RQTLLFSATFSDDI 193
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 142 bits (344), Expect = 8e-33
Identities = 72/192 (37%), Positives = 118/192 (61%), Gaps = 3/192 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TF+ LG+ + A +L P+ IQK++IP + G+D++G+A+TG+GKTG F LP+L
Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60
Query: 351 QALLENPQ---RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
+ E + R AL+L+PTRELA QI + + + ++VGG+D + Q L
Sbjct: 61 HKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLK 120
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ I++ATPGRL+DH+ L +++DEADR+L+M F +++ I+R +P+ R
Sbjct: 121 RNWDIVVATPGRLLDHVRR-NNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQ 179
Query: 702 TYLFSATMTXKV 737
+ LFSAT ++
Sbjct: 180 SLLFSATCPPRI 191
>UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04124 protein - Schistosoma
japonicum (Blood fluke)
Length = 157
Score = 142 bits (344), Expect = 8e-33
Identities = 74/153 (48%), Positives = 103/153 (67%), Gaps = 8/153 (5%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F DLG++ LC C+ +KW P+KIQ ++IP +L GKD++G+AETGSGKT AF LPI+
Sbjct: 1 MAFSDLGLIKELCFVCQRMKWDSPTKIQLKSIPTSLEGKDVVGIAETGSGKTAAFLLPII 60
Query: 351 QALLENPQRY-FALILTPTRELAFQISEQFEALG------ASIGVKCAVIVGGMDMVAQA 509
Q ++ Q FALIL PTRELA Q++ + E LG ++ ++VGG D+V QA
Sbjct: 61 QHWIKCGQPIGFALILAPTRELAQQLANEAERLGQYKSEELEFHLQVILLVGGEDVVDQA 120
Query: 510 LMLS-KKPHIIIATPGRLVDHLENTKGFNLRPL 605
L L+ +K H I+ATPGRLVDHL+ + F + L
Sbjct: 121 LKLAWRKHHFIVATPGRLVDHLKQSPNFAAQQL 153
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 142 bits (343), Expect = 1e-32
Identities = 72/182 (39%), Positives = 114/182 (62%)
Frame = +3
Query: 180 KDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQAL 359
K+ + + L A E + +P++IQK++IPVA+ G DI+ ++TGSGKT A+ LP++ +
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 360 LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHII 539
++N + ALIL PTRELA QI + S + AV++GG M Q + L K P +I
Sbjct: 66 IKN--KTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123
Query: 540 IATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSA 719
I TPGR++DHL N + + V+DE DR+L+M + ++++I + +P +R +FSA
Sbjct: 124 IGTPGRIIDHL-NRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSA 182
Query: 720 TM 725
TM
Sbjct: 183 TM 184
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 142 bits (343), Expect = 1e-32
Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
T K L + + +A + + S IQ +++P AL GKD+IG A+TGSGKT F +P L+
Sbjct: 5 TVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALE 64
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKP 530
+ N A++L PTRELA Q+++Q + IG +K + GG M Q L P
Sbjct: 65 KIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSP 124
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
HII+ TPGR++DH+E + +LR +K V+DEADR+L+M FE ++ I P++ T L
Sbjct: 125 HIIVGTPGRVMDHVEKRR-IDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTLL 183
Query: 711 FSATMTXKV 737
FSAT T ++
Sbjct: 184 FSATFTEQI 192
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 142 bits (343), Expect = 1e-32
Identities = 77/215 (35%), Positives = 120/215 (55%), Gaps = 5/215 (2%)
Frame = +3
Query: 108 QXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 287
Q +E+ + + E+ +TF++L + + E +E W P+ IQ +IP+ L G
Sbjct: 64 QKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGN 123
Query: 288 DIIGLAETGSGKTGAFALPIL-----QALLENPQRYFALILTPTRELAFQISEQFEALGA 452
D++G+A+TGSGKT +F +P L Q + L+L+PTRELA Q E
Sbjct: 124 DMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCV 183
Query: 453 SIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 632
+G K I GG D Q L P I+ ATPGRL+D L++ FN +LV+DEAD
Sbjct: 184 KMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGV-FNPNRANFLVLDEAD 242
Query: 633 RILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
R+L+M FE ++ I+ ++ ++R T++FSAT ++
Sbjct: 243 RMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEI 277
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 142 bits (343), Expect = 1e-32
Identities = 80/192 (41%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP---I 347
F++L + +A E++ + + +Q IP L G+D++G A+TGSGKT AF +P +
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 348 LQALLENPQRYFALI-LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L +L P+ +I +TPTRELA QI L +++GG + +A L K
Sbjct: 104 LHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMK 163
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE-RH 701
+++IATPGRL+DHL+NTKGF + LK L++DEADRIL + FE E+ +I++ +P E R
Sbjct: 164 GVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQ 223
Query: 702 TYLFSATMTXKV 737
+ LFSAT T KV
Sbjct: 224 SMLFSATQTTKV 235
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 141 bits (342), Expect = 1e-32
Identities = 71/170 (41%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Frame = +3
Query: 231 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ-RYFALILTPTR 407
+K+P+ IQ +AIP + G D+IGLA+TG+GKT A+ALPI+Q +L P+ R L++ PTR
Sbjct: 21 YKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTR 80
Query: 408 ELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG 587
ELA QIS+ F +LG ++ I GG++M Q L +++A PGRL+DH+
Sbjct: 81 ELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGT- 139
Query: 588 FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
++ ++ L++DEADR+ +M F+ ++ IL+ + + T LFSATM +V
Sbjct: 140 IDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLFSATMPPEV 189
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 141 bits (342), Expect = 1e-32
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 5/183 (2%)
Frame = +3
Query: 204 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL-----QALLEN 368
+ + E +K+P+ IQ ++ P+AL G+D+IG+AETGSGKT AF LP + QALL
Sbjct: 221 ILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQALLRP 280
Query: 369 PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIAT 548
L+L PTRELA QI E G S +K +V GG+ Q + L + I+IA
Sbjct: 281 GDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIAC 340
Query: 549 PGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMT 728
PGRL+D LE++ NLR + YLV+DEADR+L+M FE ++ KI+ I +R T +FSAT
Sbjct: 341 PGRLIDFLESSV-TNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWP 399
Query: 729 XKV 737
+V
Sbjct: 400 KEV 402
>UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n=1;
Toxoplasma gondii RH|Rep: ATP-dependent RNA helicase,
putative - Toxoplasma gondii RH
Length = 574
Score = 141 bits (342), Expect = 1e-32
Identities = 79/192 (41%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF LGV L L PS IQ ++P L GK++ GLA TGSGKT + P+LQ
Sbjct: 133 TFASLGVPPALIRTAASLHIFHPSPIQVLSLPHTLRGKNVCGLAPTGSGKTLGYCWPLLQ 192
Query: 354 ALLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ F L+L P RELA Q+ +QF G +GV+ +++GG D+V + +L + P
Sbjct: 193 RIGRGDGHAFMGLVLLPARELAIQVLDQFRIYGVQLGVRVCLLLGGRDLVEEGKLLDQCP 252
Query: 531 HIIIATPGRLVDHLEN---TKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP---R 692
HI+IATPGR+ DH++N L + LV+DEADR+L+ +FE ++ IL +P +
Sbjct: 253 HIVIATPGRMSDHVQNDPLRMKKRLSLVDVLVLDEADRLLSDEFEDDLKTILSCVPTSSQ 312
Query: 693 ERHTYLFSATMT 728
R T LFSAT++
Sbjct: 313 GRQTLLFSATVS 324
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 141 bits (342), Expect = 1e-32
Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 4/226 (1%)
Frame = +3
Query: 72 LQXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKI 251
+ +K+ + + ++E E + + E F D + + + + P+ I
Sbjct: 21 IDKKKSWDKEQQEMKDLEDRCKEIGSSEVEK----FSDFPISKRTLDGLMKAGFVTPTDI 76
Query: 252 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTRELAF 419
QK+ IPVAL G+D++G A+TGSGKT AF +PI++ L AL+++PTRELA+
Sbjct: 77 QKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAY 136
Query: 420 QISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLR 599
Q E +G + +I+GG D+ + + K +I++ TPGRL+ H++ T F+
Sbjct: 137 QTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMKT-NIVVCTPGRLLQHMDETPNFDCT 195
Query: 600 PLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L+ LV+DEADRIL+M F ++ I+ +P ER T L+SAT T V
Sbjct: 196 SLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSV 241
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 141 bits (342), Expect = 1e-32
Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Frame = +3
Query: 159 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 338
ED I+F DL + + A E + P+K+Q E IP L G+DI A TGSGK+ AF
Sbjct: 3 EDKIISFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFL 62
Query: 339 LPILQALL--ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
+PI+Q LL ALI++PTRELA Q+ + L A + +++GG+ Q
Sbjct: 63 IPIVQKLLTFRGLPGPKALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQRE 122
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
+L+ P III TPGR +D + N K L L++ V+DEADR+L FE +++ I+ +P
Sbjct: 123 LLTPAPDIIIGTPGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQLPE 182
Query: 693 ERHTYLFSATMTXKV 737
+ T LF+AT+ +V
Sbjct: 183 KHQTLLFTATLNDQV 197
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 141 bits (342), Expect = 1e-32
Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 8/203 (3%)
Frame = +3
Query: 153 DTEDDKIT----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSG 320
D D KIT FKDL + D + E + K ++IQ ++IPV+L G D++ A+TGSG
Sbjct: 31 DEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSG 90
Query: 321 KTGAFALPILQALLENPQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
KT AF +P+++ L F ALI++PTRELA QI E +G+ +++GG
Sbjct: 91 KTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGG 150
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
D+ + +S+ +I+I TPGR++ HL+ G N L+ LV+DEADR L+M F+ +D
Sbjct: 151 KDVKFELERISRI-NILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLD 209
Query: 669 KILRAIPRERHTYLFSATMTXKV 737
I+ + R T LFSAT + V
Sbjct: 210 AIVSTLSPSRQTLLFSATQSQSV 232
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 141 bits (341), Expect = 2e-32
Identities = 79/188 (42%), Positives = 114/188 (60%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF+++ + VL A ++K KP+ +Q +AIP +L G DII +A+TGSGKT AFAL +L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L + P+ LIL P+RE+A QI + F L A + V + +GG QA L K P
Sbjct: 94 TLQKKPEAR-GLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+IIATPGR+ DHL K L+ ++ +V+DEADR+L+M F ++ I + R T +F
Sbjct: 153 LIIATPGRMNDHLSGNK-LLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMF 211
Query: 714 SATMTXKV 737
SA+ V
Sbjct: 212 SASFGSNV 219
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 141 bits (341), Expect = 2e-32
Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ +G+ L A + +K P+ IQ++ IP+ L G+D++G+A TGSGKT AF +P+++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 357 L---LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
L L N ALIL+P RELA Q + + ++ IVGG+ + Q +LS K
Sbjct: 131 LKSTLANSNTR-ALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGK 189
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
P I++ATPGR + HL+ L ++Y+V DEADR+ M F ++ +IL A+P R T
Sbjct: 190 PDIVVATPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTL 248
Query: 708 LFSATM 725
LFSAT+
Sbjct: 249 LFSATL 254
>UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 642
Score = 140 bits (340), Expect = 2e-32
Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Frame = +3
Query: 96 SATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 275
S ++ +E + PT + D F DL V +A +++K+ + IQ IP
Sbjct: 129 SDESKATEQQDAPTSRAGFFSND---LFDDLEVCKPTKDALKQMKFTNMTHIQSRTIPHL 185
Query: 276 LLGKDIIGLAETGSGKTGAFALPILQALLEN----PQRYFALILTPTRELAFQISEQFEA 443
L G+D++G A+TGSGKT AF +P ++ L + +++TPTRELA QI + +
Sbjct: 186 LKGRDVLGAAKTGSGKTLAFLIPAIEMLYKTNFVQSMGTGIIVITPTRELATQIYDVAKQ 245
Query: 444 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMD 623
L +++GG + A+A+ L ++IIATPGRL+DHL+NT GF L L++D
Sbjct: 246 LMFFHSKTLGLLIGGANRKAEAIKLKTGVNMIIATPGRLLDHLQNTAGFAYHNLLGLIID 305
Query: 624 EADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
EAD IL + F+ E+ +IL+ +P +R T LFSAT K+
Sbjct: 306 EADAILRIGFQEELTEILKLLPIDRQTVLFSATQNKKI 343
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 140 bits (340), Expect = 2e-32
Identities = 71/190 (37%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F +LG+ +A + + + IQ AIPVAL G+D++G+A+TG+GKT AF LP++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 357 LLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
L+ + AL++ PTRELA Q++ FE + A+++GG+ Q L +
Sbjct: 64 LMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRG 123
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
++IATPGRL+DH E K + +++LV+DEADR+L+M F ++++I + P ++ T
Sbjct: 124 VDVLIATPGRLLDHFERGK-LLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTL 182
Query: 708 LFSATMTXKV 737
FSATM ++
Sbjct: 183 FFSATMPPEI 192
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 140 bits (340), Expect = 2e-32
Identities = 78/194 (40%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ + +A E + PS IQ +AIP L GKD++ A+TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 351 QALLENPQ----RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+ L + + + AL+LTPTRELA Q+SE E G + ++ AV+ GG+ + Q L
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
Query: 519 SKKPHIIIATPGRLVDHL-ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRE 695
+++ATPGRL+D + +N FN L+ LV+DEADR+L+M F ++ KIL +P +
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNVVKFN--QLEILVLDEADRMLDMGFIRDIKKILALLPAK 178
Query: 696 RHTYLFSATMTXKV 737
R +FSAT + ++
Sbjct: 179 RQNLMFSATFSDEI 192
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 140 bits (340), Expect = 2e-32
Identities = 69/188 (36%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKD-IIGLAETGSGKTGAFALPILQ 353
F+ +G+ D + A + ++ P+ IQ++ IP+ L GK+ +IG A+TG+GKT AF +P+++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L E AL+LTPTRELA Q+ + ++L + + + GG+ + Q L ++
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+++ TPGR++DHL N ++ +KYLV+DEAD +L+M F +V+ IL +E+ +F
Sbjct: 124 LVVGTPGRIIDHL-NRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMF 182
Query: 714 SATMTXKV 737
SATM ++
Sbjct: 183 SATMPQRI 190
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 140 bits (339), Expect = 3e-32
Identities = 75/192 (39%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
FK +++ + + +K+P+ IQKE IP + G D++G+A+TG+GKT AF+LPI+
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 357 LLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
N + +LILTPTRELA QI + + +G+K V+ GG+ AQ +
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
I++ATPGRL+D +E T N + L+ V+DEAD +L+M F +V I+ +P+ R
Sbjct: 124 LGLDILVATPGRLLDLIE-TGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQ 182
Query: 702 TYLFSATMTXKV 737
T LFSATM ++
Sbjct: 183 TLLFSATMPAEI 194
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 140 bits (339), Expect = 3e-32
Identities = 78/191 (40%), Positives = 120/191 (62%), Gaps = 6/191 (3%)
Frame = +3
Query: 183 DLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQAL- 359
+L +++ + +A + + + IQ EAIP L G D++G A+TG+GKT AFA+PILQ+L
Sbjct: 5 ELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLA 64
Query: 360 -----LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L+ ++ AL+L PTRELA QI+E F A G ++ ++ VI GG+ Q L K
Sbjct: 65 MGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEK 124
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
I++ATPGRL+D L N +L +++ V+DE D++L+M +V +I+ +PRER
Sbjct: 125 GIDILVATPGRLLD-LINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQN 183
Query: 705 YLFSATMTXKV 737
LFSATM ++
Sbjct: 184 MLFSATMPVEI 194
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 140 bits (339), Expect = 3e-32
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 7/190 (3%)
Frame = +3
Query: 189 GVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN 368
G+ + + ++L ++KP IQ +A+P+ + G+D IG+A+TGSGKT F LP+L+ + +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 369 P-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
P L++ PTREL QI +G++C + GG + Q L +
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654
Query: 534 IIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
I++ TPGR++D L + G NLR + +LVMDEADR+ +M FE ++ +I++ I ER T
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714
Query: 708 LFSATMTXKV 737
LFSAT +V
Sbjct: 715 LFSATFPRQV 724
>UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 624
Score = 140 bits (338), Expect = 4e-32
Identities = 77/167 (46%), Positives = 110/167 (65%), Gaps = 4/167 (2%)
Frame = +3
Query: 249 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTRELA 416
IQ+ AIP AL G+DIIG A TGSGKT AF +P+++ + + A+IL+PTRELA
Sbjct: 115 IQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFMYRSRWTELDGLCAIILSPTRELA 174
Query: 417 FQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNL 596
QI + F ++ A A+I GG D +A ++ + +++I TPGRL+ HL+NT FN
Sbjct: 175 QQIFDVFASI-AGERFTAALITGGKDTKEEAKVI-RLMNVLICTPGRLLYHLDNTPHFNT 232
Query: 597 RPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
PL+ L++DEADRIL+M F+ ++ IL +P++R T LFSAT T V
Sbjct: 233 TPLRMLILDEADRILDMGFKKDLTAILEHLPKQRQTMLFSATQTKSV 279
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 140 bits (338), Expect = 4e-32
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 2/193 (1%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 344
+ I F DLG+ + L +A +++ +++PS+IQ E+IPVAL G DIIG A+TG+GKT AF
Sbjct: 2 NNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCA 61
Query: 345 IL-QALLENPQRY-FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
I+ A ++ ALIL PTRELA Q++E+ LG + I GG + Q L
Sbjct: 62 IINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRAL 121
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
I++ TPGR++D L K L + +LV+DEAD +LNM F ++++I++++ +R
Sbjct: 122 KNGVDIVVGTPGRVLD-LIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDR 180
Query: 699 HTYLFSATMTXKV 737
T LFSATM ++
Sbjct: 181 QTLLFSATMPPQI 193
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 140 bits (338), Expect = 4e-32
Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 27/216 (12%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F+ + + + +AC + P+ IQ+ IPVAL GKDI A TG+GKT AF LPIL
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
Query: 351 QALLENPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
+ ++ P+ L+L PTRELA Q+ + F L I ++ + GG+D+ AQ L
Sbjct: 208 ERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPL------------------------KYLVMDEA 629
P +++ATPGRL+DHL N+ FNL + + LV+DEA
Sbjct: 268 SGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEA 327
Query: 630 DRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
DR+L F ++++++R + R T LFSATMT ++
Sbjct: 328 DRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEI 363
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 140 bits (338), Expect = 4e-32
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 7/190 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F G+ D + + E+ ++++P IQ + IP + G+D+IG+AETGSGKT AF LP ++
Sbjct: 369 SFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIR 428
Query: 354 ALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
L+ P L++ PTREL QIS + ++G+K I GG + Q L
Sbjct: 429 HALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNAL 488
Query: 519 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
+ I+I TPGRL+D L +KG NLR + +LV+DEADR+ +M F ++ I+ I
Sbjct: 489 KRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIRP 548
Query: 693 ERHTYLFSAT 722
+R T LFSAT
Sbjct: 549 DRQTALFSAT 558
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 140 bits (338), Expect = 4e-32
Identities = 73/191 (38%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F D + + +E +++ ++IQK+ I +AL GKD++G A+TGSGKT AF +P+L+A
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 357 LLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L + LI++PTRELA+Q E +G + +I+GG D+ +A ++
Sbjct: 131 LYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINN 190
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
+I++ TPGRL+ H++ T F+ L+ LV+DEADRIL+M F ++ ++ +P++R T
Sbjct: 191 I-NILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQT 249
Query: 705 YLFSATMTXKV 737
LFSAT T V
Sbjct: 250 LLFSATQTKSV 260
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 140 bits (338), Expect = 4e-32
Identities = 73/191 (38%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DL + + ++ + +Q+ AIP+AL G+DI+G A+TGSGKT AF +P+L+
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 357 LLENPQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L + ALI++PTRELA QI E +G + +++GG + +A L +
Sbjct: 115 LYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHFFSAGLVIGGKSLKEEAERLGR 174
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
+I++ TPGR++ HL+ T F++ L+ LV+DEADRI++M F+ VD ++ +P R T
Sbjct: 175 M-NILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTRQT 233
Query: 705 YLFSATMTXKV 737
LFSAT + +V
Sbjct: 234 LLFSATQSKRV 244
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 139 bits (337), Expect = 6e-32
Identities = 75/191 (39%), Positives = 117/191 (61%), Gaps = 2/191 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL-GKDIIGLAETGSGKTGAFALPI 347
+TF LG+ L +A ++ ++ PSKIQ+EAIP L +D++ LA+TG+GKT AF P+
Sbjct: 1 MTFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPL 60
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 524
LQ + + + LI+ PTREL QI+ + + I GV+ + GG ++ QA +S+
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISR 120
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
I++ATPGR+ D + + ++ L Y V+DEAD +LNM F ++ IL P ++ T
Sbjct: 121 GAQIVVATPGRMQDMMRR-RMVDITKLSYCVLDEADEMLNMGFYEDITNILADTPEDKLT 179
Query: 705 YLFSATMTXKV 737
+LFSATM +V
Sbjct: 180 WLFSATMPREV 190
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 139 bits (337), Expect = 6e-32
Identities = 84/218 (38%), Positives = 123/218 (56%), Gaps = 4/218 (1%)
Frame = +3
Query: 96 SATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 275
S ++ SE+ + T E+ +F D + ++ ++ KP+ IQ+E+I A
Sbjct: 38 SMKDEESEIARLTELYATAKIEETS-SFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPA 96
Query: 276 LLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTRELAFQISEQFEA 443
L GKDI+ A+TGSGKT AF +P+ + L N ALI+TPTRELA QI E
Sbjct: 97 LQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAK 156
Query: 444 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMD 623
+G +I+GG ++ A+ L + +III TPGRL+ H++ F+ LK LV+D
Sbjct: 157 IGKLHDFTTGLIIGGQNLKAEKNRLHQL-NIIICTPGRLLQHMDQNPLFDCTNLKILVLD 215
Query: 624 EADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
EADR L++ FE ++ I+ +P ER T LFSAT T V
Sbjct: 216 EADRCLDLGFESAMNAIIENLPSERQTLLFSATQTKSV 253
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 139 bits (337), Expect = 6e-32
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 4/191 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F L + D C + + + IQ +++ ++L GKD++G A TGSGKT AF +P+L+
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEI 119
Query: 357 LLENP----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L AL+++PTRELA QI E +G+ +++GG D+ + LS+
Sbjct: 120 LYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKDRLSR 179
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
+I+IATPGRL+ H++ T GF+ ++ LV+DEADRIL+M F ++ I+ +PR R T
Sbjct: 180 I-NILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNRQT 238
Query: 705 YLFSATMTXKV 737
LFSAT T +V
Sbjct: 239 MLFSATQTKRV 249
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 139 bits (336), Expect = 8e-32
Identities = 83/215 (38%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Frame = +3
Query: 96 SATNQXSEVEQTPTENVTEDTEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIP 269
++++ S+VE E V + K + F+ +G+ + + +K P+ IQ++ IP
Sbjct: 10 ASSDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIP 69
Query: 270 VALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF---ALILTPTRELAFQISEQFE 440
V L GKD++ +A TGSGKT AF +P+ + L + PQ ALIL+PTRELA Q + +
Sbjct: 70 VILDGKDVVAMARTGSGKTAAFLIPMFERL-KAPQAQTGARALILSPTRELALQTMKFTK 128
Query: 441 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVM 620
LG +K A+I+GG M Q L + P III TPGRL+ H+ L+ ++Y+V
Sbjct: 129 ELGKFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLM-HVIKEMNLKLQNVEYVVF 187
Query: 621 DEADRILNMDFEVEVDKILRAIPRERHTYLFSATM 725
DEADR+ M F ++ +I+R P R T LFSAT+
Sbjct: 188 DEADRLFEMGFAEQLQEIIRRFPETRQTLLFSATL 222
>UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=8; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio vulnificus
Length = 447
Score = 139 bits (336), Expect = 8e-32
Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 5/190 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ FKDLG+ + L + + L ++K +KIQ++AIPVA+ GKD++ ++TGSGKT AF LP+L
Sbjct: 5 LQFKDLGLDNRLLKNLKHLDFQKATKIQQQAIPVAIAGKDLLASSKTGSGKTLAFVLPML 64
Query: 351 QALLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
L+ + + +IL PTRELA Q+ + + + +IVGG + Q L
Sbjct: 65 HKSLKTKALSARDPRGVILAPTRELAKQVYGELRTMLGGLSYDATLIVGGENFNDQVKAL 124
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP-RE 695
++ P I+ATPGRL DHLE+ F L L+ LV+DEADR+L++ F E+ +I A R
Sbjct: 125 ARYPKFIVATPGRLADHLEHKSVF-LEGLETLVLDEADRMLDLGFAPELRRIHNAAKHRR 183
Query: 696 RHTYLFSATM 725
R T +FSAT+
Sbjct: 184 RQTLMFSATL 193
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 139 bits (336), Expect = 8e-32
Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F DLG+ L E + P+ +Q+++IP L GKD++ A+TG+GKT AF LPI+
Sbjct: 7 VNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPII 66
Query: 351 QALLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
QA+ + + ALIL PTRELA Q+ + ++ + GG + Q L +
Sbjct: 67 QAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEE 126
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
I+IATPGRL+DHL N N+ LV+DEADR+L+M F ++ +ILR +P ++
Sbjct: 127 GADILIATPGRLLDHLFN-GNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQI 185
Query: 705 YLFSATMTXKV 737
LFSAT ++
Sbjct: 186 MLFSATFEKRI 196
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 139 bits (336), Expect = 8e-32
Identities = 75/181 (41%), Positives = 112/181 (61%), Gaps = 9/181 (4%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 350
++KD + + E ++ +K+P+ IQ++AIP+ L +DIIG+AETGSGKT AF +P+L
Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 451
Query: 351 --------QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 506
+ E+ Q +A+IL PTRELA QI E+ G +G++ ++GG+ Q
Sbjct: 452 WITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQ 511
Query: 507 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
L I+IATPGRL+D LEN + L Y+V+DEADR+++M FE +V KIL +
Sbjct: 512 GFRLRMGCEIVIATPGRLIDVLEN-RYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHM 570
Query: 687 P 689
P
Sbjct: 571 P 571
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 138 bits (335), Expect = 1e-31
Identities = 76/192 (39%), Positives = 115/192 (59%), Gaps = 4/192 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F DL + + +E + KP+ IQ+E I + L GKDI+G A+TGSGKT AF +PIL+
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 354 ALLENPQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L AL++TPTRELA+QI E+ +G +I+GG D+ + +
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNRMD 171
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ +I+I TPGR++ H++ F+ ++ LV+DEADR L+M FE ++ I+ +P +R
Sbjct: 172 QC-NIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLPAKRQ 230
Query: 702 TYLFSATMTXKV 737
T LFSAT T V
Sbjct: 231 TLLFSATQTKSV 242
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 138 bits (335), Expect = 1e-31
Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TFK+L + D + A E+ + + ++IQ AIP+ L GK+I G + TG+GKT +F LPIL
Sbjct: 1 MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL 60
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 527
+ + N +R A+I+ PTRELA QI Q G+ I + A ++GG DM Q L K
Sbjct: 61 EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRL-KD 119
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
I++ TPGR+ DHL N K L ++ +++DEAD +L M F+ E+D + + +
Sbjct: 120 SQIVVGTPGRVNDHL-NRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIG 178
Query: 708 LFSATMTXKV 737
LFSAT + KV
Sbjct: 179 LFSATTSPKV 188
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 138 bits (335), Expect = 1e-31
Identities = 77/199 (38%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Frame = +3
Query: 135 TENVTED-TEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAET 311
T+ TE TE + + F LG+ + L A + + + IQ IP L GKD++G A+T
Sbjct: 2 TDQKTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQT 61
Query: 312 GSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGG 488
G+GKT AF LP L + + ++ ++L PTRELA Q++E E+ G + G++ A + GG
Sbjct: 62 GTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGG 121
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
Q L + +++ TPGRL+DHL K L L+ V+DEAD +LNM F ++
Sbjct: 122 QSYGPQFQQLERGAQVVVGTPGRLMDHLRR-KSLKLDELRVCVLDEADEMLNMGFLEDIQ 180
Query: 669 KILRAIPRERHTYLFSATM 725
IL IP+ LFSATM
Sbjct: 181 WILDHIPKTAQMCLFSATM 199
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 138 bits (335), Expect = 1e-31
Identities = 83/195 (42%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ D L +K+P+ IQ +AIP L G D+I AETGSGKT F LP+L
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 351 QALLENP----QRYFALILTPTRELAFQISEQFEALGASI--GVKCAVIVGGMDMVAQAL 512
+ L P AL+L PTRELA Q+S+ + + ++ I GG + Q
Sbjct: 61 EKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQ 120
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
LSK I++ATPGRL+D L +LR LK LV+DEADR+L++ F E+D IL P
Sbjct: 121 SLSKGCDIVVATPGRLLD-LMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPG 179
Query: 693 ERHTYLFSATMTXKV 737
T LFSAT KV
Sbjct: 180 NVQTLLFSATFPDKV 194
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 138 bits (335), Expect = 1e-31
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F LG+ L A EE +++PS IQ+++IP L GKD++GLA+TG+GKT AF LP+L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKKPH 533
+ L+L PTRELA Q++ E+ VK A I GG D +Q L + P
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
++ TPGR++DH+ L ++ +V+DEAD +L M F +VD +L +P +R LF
Sbjct: 128 WVVGTPGRVMDHIRRGT-LKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALF 186
Query: 714 SATMTXKV 737
SATM ++
Sbjct: 187 SATMPKQI 194
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 138 bits (335), Expect = 1e-31
Identities = 78/190 (41%), Positives = 109/190 (57%)
Frame = +3
Query: 168 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
K F LG+ + + + +P+ +Q +AIP L +D++ A+TG+GKT AF LPI
Sbjct: 2 KNKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPI 61
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
L+ + ALI+TPTRELA QI+ + + L G+ GG D+ Q L
Sbjct: 62 LERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGS 121
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
HIII TPGRL+DHL K NL L LV+DEAD++L+M F +V+ I+ IP+ R
Sbjct: 122 IHIIIGTPGRLLDHLRR-KTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNM 180
Query: 708 LFSATMTXKV 737
FSATM +V
Sbjct: 181 FFSATMPNQV 190
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 138 bits (335), Expect = 1e-31
Identities = 72/180 (40%), Positives = 112/180 (62%), Gaps = 9/180 (5%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
+++ G D + +A +E+ + +P+ IQ++AIP+ L +D+IG+AETGSGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 357 LLENPQRY---------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 509
+ P+ +A+I+ PTRELA QI E+ G +G+K ++GG Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQG 422
Query: 510 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP 689
+ L ++IATPGRL+D LEN + L Y+++DEADR+L+M FE +V K+L +P
Sbjct: 423 MKLRMGVEVVIATPGRLLDVLEN-RYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMP 481
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 138 bits (335), Expect = 1e-31
Identities = 67/168 (39%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F++LG+ L + C ++ +K+P IQ +IP L GK+++ ++TGSGKT AF+ PILQ
Sbjct: 9 FEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPILQT 68
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
L ++P FA+ILT RELA QI+EQ + GAS+ ++ A+++GG+ Q +L + PHI
Sbjct: 69 LSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLGQIPHI 128
Query: 537 IIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRILNMDFEVEVDKI 674
I+ TPGR + L F ++ +KY ++DE DR+L ++ K+
Sbjct: 129 IVGTPGRCAELLSIDVNFQKYIKNVKYFILDEVDRLLEPQIWDDIKKV 176
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 138 bits (335), Expect = 1e-31
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 7/190 (3%)
Frame = +3
Query: 189 GVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN 368
G+ + + ++L ++KP IQ +A+P+ + G+D IG+A+TGSGKT F LP+L+ + +
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 461
Query: 369 P-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
P L++ PTREL QI ++G+ C + GG + Q L +
Sbjct: 462 PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTE 521
Query: 534 IIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
I++ TPGR++D L + G NLR + YLVMDEADR+ +M FE ++ +I++ I +R T
Sbjct: 522 IVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTV 581
Query: 708 LFSATMTXKV 737
LFSAT +V
Sbjct: 582 LFSATFPRQV 591
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 138 bits (335), Expect = 1e-31
Identities = 77/197 (39%), Positives = 111/197 (56%), Gaps = 8/197 (4%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACE-ELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
I + LG+ + E L + PS IQ +AIP + G+DIIG+A+TGSGKT +F LP+
Sbjct: 316 IRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPL 375
Query: 348 LQALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
L+ + + P LI+TPTRELA QI ++ + + GG + +Q
Sbjct: 376 LRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIA 435
Query: 513 MLSKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
L K II+ TPGR++D L G NL+ + YLV+DEADR+ +M FE +V K+ +
Sbjct: 436 ELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRV 495
Query: 687 PRERHTYLFSATMTXKV 737
+R T LFSAT K+
Sbjct: 496 RPDRQTVLFSATFPRKM 512
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 138 bits (335), Expect = 1e-31
Identities = 72/185 (38%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ +G+ L +A + P+ IQ++ IPV + +D++G+A TGSGKT AF +P+++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 357 LLENPQRYFA--LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
L + ++ A LIL+P+RELA Q + + LG +K ++VGG + Q M++ P
Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNP 212
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
I+IATPGR + HL+ +L +KY+V DEADR+ M F ++ +IL +P R T L
Sbjct: 213 DIVIATPGRFL-HLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLL 271
Query: 711 FSATM 725
FSAT+
Sbjct: 272 FSATL 276
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 138 bits (335), Expect = 1e-31
Identities = 72/185 (38%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ +G+ L A + P+ IQ++ IP+ L +D++G+A TGSGKT AF +P+++
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 357 LLENPQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
L + R A+I++P+RELA Q + + LG +K ++VGG + Q +++ P
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANP 207
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
IIIATPGR + HL+ NL ++Y+V DEADR+ M F ++ +IL A+P R T L
Sbjct: 208 DIIIATPGRFL-HLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPPSRQTLL 266
Query: 711 FSATM 725
FSAT+
Sbjct: 267 FSATL 271
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 138 bits (334), Expect = 1e-31
Identities = 74/186 (39%), Positives = 110/186 (59%), Gaps = 1/186 (0%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F D+ + + E +++ P+ IQ +AIP L G+D++G A+TG+GKT AF LP L
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 527
+ + ++ L++TPTRELA Q++E E A + GV A + GG Q L +
Sbjct: 68 AKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQG 127
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
I++ TPGRL+D L N L LK V+DEAD +LNM F +++ IL+A+P
Sbjct: 128 TAIVVGTPGRLID-LLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRA 186
Query: 708 LFSATM 725
LFSATM
Sbjct: 187 LFSATM 192
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 138 bits (334), Expect = 1e-31
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Frame = +3
Query: 153 DTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGA 332
D +D F +L + L + L +++P+ IQ+EA+P + G+D++G A TG+GKT A
Sbjct: 51 DPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAA 110
Query: 333 FALPILQALLEN---PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA 503
FALP+L L ++ AL+L PTRELA Q+SE G +G + + GG +
Sbjct: 111 FALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGR 170
Query: 504 QALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRA 683
Q L + +++ATPGR +DH+ L L +V+DEAD +L+M F ++D IL
Sbjct: 171 QVRALVQGVDVVVATPGRALDHM-GRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQ 229
Query: 684 IPRERHTYLFSATM 725
P++R T LFSAT+
Sbjct: 230 APQKRQTVLFSATL 243
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 138 bits (334), Expect = 1e-31
Identities = 74/190 (38%), Positives = 118/190 (62%), Gaps = 3/190 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI--IGLAETGSGKTGAFALPIL 350
F+ LG+ + L A +L ++ P+++Q++AIP+ LL KDI + LA+TG+GKT AF P++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPM-LLEKDIDLVALAQTGTGKTAAFGFPVI 62
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKK 527
Q + N + ALIL+PTREL QI+ + + G+ + GG + QA + +
Sbjct: 63 QKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRG 122
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
II+ATPGR+ D + N + ++ + Y ++DEAD +LNM F ++ IL P E++T+
Sbjct: 123 AQIIVATPGRMQDMI-NRRLVDISQINYCILDEADEMLNMGFYEDIVNILSTTPDEKNTW 181
Query: 708 LFSATMTXKV 737
LFSATM +V
Sbjct: 182 LFSATMPAEV 191
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 138 bits (334), Expect = 1e-31
Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 16/221 (7%)
Frame = +3
Query: 123 EQTPTE-NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIG 299
E P E + T ++ + F + + + + K+ +P+ IQK AIP+ L GKD++G
Sbjct: 253 ESIPVEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMG 312
Query: 300 LAETGSGKTGAFALPILQALLEN-----------PQRYFALILTPTRELAFQISEQFEAL 446
A+TGSGKT AF LP+L +++N PQ A+I+ PTREL QI +
Sbjct: 313 CAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYLEARKF 372
Query: 447 GASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDE 626
+S V+ V+ GG + QA L K H+++ TPGRL+D + K NL +KYL++DE
Sbjct: 373 ASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGK-INLSKVKYLILDE 431
Query: 627 ADRILNMDFEVEVDKILRA--IPR--ERHTYLFSATMTXKV 737
ADR+L+M FE E+ K++ +P +R T +FSAT ++
Sbjct: 432 ADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEI 472
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 138 bits (334), Expect = 1e-31
Identities = 71/185 (38%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF + + + L +A ++ +++P+ IQ AIP L GKD+ G A+TG+GKT AF +PI++
Sbjct: 6 TFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIE 65
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEAL-GASIGVKCAVIVGGMDMVAQALMLSKKP 530
L + + AL+L+PTRELA Q +E+F L G+ I GG + Q L
Sbjct: 66 RLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGTV 125
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
++I TPGR++DH++ +L + ++DEAD++L+M F +++ I R P++R T L
Sbjct: 126 QVVIGTPGRVIDHIKRGT-LHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTIL 184
Query: 711 FSATM 725
FSATM
Sbjct: 185 FSATM 189
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 138 bits (334), Expect = 1e-31
Identities = 79/230 (34%), Positives = 138/230 (60%), Gaps = 15/230 (6%)
Frame = +3
Query: 93 ESATNQXSEVEQTPTENV-TEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIP 269
++A+ + + ++ E+V T D+ K F + + +A ++ ++ + +Q+ +P
Sbjct: 355 KAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLP 414
Query: 270 VALLGKDIIGLAETGSGKTGAFALPILQALLENPQR--------YFALILTPTRELAFQI 425
+ L GKD++ A+TG+GKT AF LP ++A++++P L++ PTRELA Q
Sbjct: 415 IILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQA 474
Query: 426 SEQFEAL---GASIGVKCAVIVGGMDMVAQALMLSKKP-HIIIATPGRLVDHLENTKGF- 590
+ + L SIGV+ V++GG + + + P I++ATPGRL DH+ENT GF
Sbjct: 475 AAEANTLLKYHPSIGVQ--VVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFA 532
Query: 591 -NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L +K LV+DEAD +L+M F ++++I+ A+P++R T+LFSAT+ +V
Sbjct: 533 TRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEV 582
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 138 bits (334), Expect = 1e-31
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F D + + +E +++ ++IQK+ I +AL GKD++G A+TGSGKT AF +P+L+A
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 357 LLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
L + LI++PTRELA+Q E +G + +I+GG D+ +A ++
Sbjct: 131 LYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINN 190
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
+I++ TPGRL+ H++ T F+ L+ LV+DEADRIL+M F ++ I+ +P++R T
Sbjct: 191 I-NILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQT 249
Query: 705 YLFSATMTXKV 737
LFSAT T V
Sbjct: 250 LLFSATQTKSV 260
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 138 bits (334), Expect = 1e-31
Identities = 71/185 (38%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ +G+ L +A + +K P+ IQ++A+P+ L G D++G+A TGSGKT AF +P+++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 357 LLENPQRYFA--LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
L + + A +I++P+RELA Q + + G ++ ++VGG + Q ++ P
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNP 199
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
IIIATPGR + HL+ G +L ++Y+V DEADR+ M F ++ +IL A+P R T L
Sbjct: 200 DIIIATPGRFL-HLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPTSRQTLL 258
Query: 711 FSATM 725
FSAT+
Sbjct: 259 FSATL 263
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 138 bits (333), Expect = 2e-31
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 2/189 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQ 353
F+ LG+ L ++ ++ P++IQ+++IP+ L D IGLA+TG+GKT AF LP+L
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKP 530
+ N + ALIL PTRELA QI Q E + +G + + GG +++ Q + +
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
II+ATPGRL+D L + L LKY+V+DEAD +LNM F+ ++D IL R+ +L
Sbjct: 135 QIIVATPGRLMD-LMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNIWL 193
Query: 711 FSATMTXKV 737
FSATM ++
Sbjct: 194 FSATMAREI 202
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 138 bits (333), Expect = 2e-31
Identities = 75/169 (44%), Positives = 107/169 (63%), Gaps = 2/169 (1%)
Frame = +3
Query: 237 KPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR--YFALILTPTRE 410
+P+ IQ AI AL GKDI+ A+TG+GKT AF LP +Q L P++ ALILTPTRE
Sbjct: 24 EPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRE 83
Query: 411 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 590
LA QI+E + G++ AV VGG++ +Q + +I++ATPGRL D +
Sbjct: 84 LALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGL-I 142
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
NL ++ L++DE+DR+L+M F + +I+ A+P ER T LFSAT+ V
Sbjct: 143 NLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSV 191
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 138 bits (333), Expect = 2e-31
Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Frame = +3
Query: 168 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 347
K+ F DL + L A +E+ ++ S IQ +P AL G D IG A+TG+GKT AF +
Sbjct: 26 KVRFHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITA 85
Query: 348 LQALLEN--PQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 509
+ LLE+ ++Y ALIL PTRELA QI+E +AL +K A +VGGMD Q
Sbjct: 86 ITDLLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQK 145
Query: 510 LML-SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
L ++ I++ATPGRL+D + N K L ++ L++DEADR+L+M F ++ I+RA
Sbjct: 146 QQLHEQRTDILVATPGRLIDFM-NRKAVFLDQIEMLIIDEADRMLDMGFIPDIKTIVRAT 204
Query: 687 PR--ERHTYLFSATMTXKV 737
PR R T LFSAT + +
Sbjct: 205 PRTENRQTLLFSATFSQDI 223
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 138 bits (333), Expect = 2e-31
Identities = 78/188 (41%), Positives = 114/188 (60%), Gaps = 5/188 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F DLG+ + +A + + P+ IQ++AIP L G+D++G+A+TG+GKT AF LP +
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 357 LLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L E R L+L PTREL QI+ + GA G+K IVGG + L
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ I+IATPGRL+D L + K FNL ++ LV+DEAD++L++ F + +I + +P+ER
Sbjct: 124 RGTDILIATPGRLLD-LIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQ 182
Query: 702 TYLFSATM 725
T FSATM
Sbjct: 183 TLFFSATM 190
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 138 bits (333), Expect = 2e-31
Identities = 81/226 (35%), Positives = 130/226 (57%), Gaps = 8/226 (3%)
Frame = +3
Query: 81 RKAMESATNQXSEVEQTPTENVTEDTEDDKIT----FKDLGVVDVLCEACEELKWKKPSK 248
+K + T E + ++++ E I F+DL + + + A +++ + +
Sbjct: 16 KKIRQKHTEDKKEGDDVASDSIKESQPGTSIILSGKFEDLPISEPVKRAIKDMGFTHMTD 75
Query: 249 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYF-ALILTPTRELA 416
IQ + IP L +DI+ A+TGSGKT AF +P+++ +L P+ A+I++PTREL+
Sbjct: 76 IQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVVELMLSLGLQPRNGTGAIIISPTRELS 135
Query: 417 FQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNL 596
Q L ++ +I+GG + +A L K I++ATPGRL+DHL NTK F
Sbjct: 136 LQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQNLEKGVTILVATPGRLLDHLTNTKFFLR 195
Query: 597 RPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXK 734
LK LV+DEADR+L++ FEVE+ +I++ +P R T LFSAT+ K
Sbjct: 196 HNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVRQTMLFSATLNEK 241
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 138 bits (333), Expect = 2e-31
Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ + + L +A + + P+ IQ+++IP+ L G DI+G+A TGSGKTGAF +P++Q
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 357 LLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
L ++ A+IL+PTRELA Q + + ++ +IVGG M Q L++ P
Sbjct: 292 LGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNP 351
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
IIIATPGRL+ HL T G +L ++Y+V DEADR+ M F ++ +IL + R T L
Sbjct: 352 DIIIATPGRLMHHLLET-GMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSENRQTLL 410
Query: 711 FSATM 725
FSAT+
Sbjct: 411 FSATL 415
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 138 bits (333), Expect = 2e-31
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 1/185 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF DL + + A ++ ++ P+ IQ IP + G D++GLA+TG+GKT AFA+P+L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKP 530
+ + AL+L PTRELA Q++E F GA + + I GG Q L +
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
+++ TPGR++DHLE +L + +LV+DEAD +L M F +V++IL P + L
Sbjct: 134 QVVVGTPGRMIDHLERAT-LDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVAL 192
Query: 711 FSATM 725
FSATM
Sbjct: 193 FSATM 197
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 138 bits (333), Expect = 2e-31
Identities = 76/193 (39%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 350
+F G + L + ++ +P+ IQ + +PVAL G+D+IG+A+TGSGKT AF P+L
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 351 ----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
Q LE A+I+ PTREL QI + + G + ++ + GG M QA L
Sbjct: 314 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL 373
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+ I++ TPGRL+DH++ K NL+ + YLV DEADR+ +M FE +V I + +R
Sbjct: 374 QEGAEIVVCTPGRLIDHVKK-KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR 432
Query: 699 HTYLFSATMTXKV 737
T LFSAT K+
Sbjct: 433 QTLLFSATFRKKI 445
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 137 bits (332), Expect = 2e-31
Identities = 73/193 (37%), Positives = 117/193 (60%), Gaps = 2/193 (1%)
Frame = +3
Query: 153 DTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGA 332
+T + +F +L + ++ A ++ + PS IQ IP AL GKD+IG A TG+GKT A
Sbjct: 38 ETPPEMDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAA 97
Query: 333 FALPILQAL--LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 506
F++PIL+ L LE+ + A+++ PTRELA Q++ + E L + + AV+ GG +M Q
Sbjct: 98 FSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQ 157
Query: 507 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
L +++ TPGR+ DHL+ + +V+DEADR+L++ F ++++I+R
Sbjct: 158 LRQLENGTQLVVGTPGRVHDHLQRGT-LRTNNVWCVVLDEADRMLDIGFRPQIERIMRKC 216
Query: 687 PRERHTYLFSATM 725
PR R T L SAT+
Sbjct: 217 PRNRQTLLLSATL 229
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 137 bits (332), Expect = 2e-31
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 7/190 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
T+ GV E L ++KP+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+ +
Sbjct: 511 TWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFR 570
Query: 354 ALLENPQR-----YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+L+ P A+I+ PTREL QI + S+G++ + GG + Q L
Sbjct: 571 HILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAEL 630
Query: 519 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
+ II+ TPGR++D L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 631 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRP 690
Query: 693 ERHTYLFSAT 722
+R T +FSAT
Sbjct: 691 DRQTVMFSAT 700
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 137 bits (332), Expect = 2e-31
Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 14/197 (7%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F +LGV + E + P+++QK IPV L G D++ A+TGSGKT AF +PIL
Sbjct: 1 MSFGELGVCPEIVELLRDKGISAPTEVQKGCIPVILEGNDVVACAKTGSGKTAAFLIPIL 60
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIG---VKCAVIVGGMDMVAQALMLS 521
Q+L+ + +ALI+TPTRELA QI EQ L G VI GG ++ Q++ L+
Sbjct: 61 QSLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLVITGGRSIIHQSIDLA 120
Query: 522 KKPHIIIATPGRLVD-----------HLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
+ PHII++TPGRL D ++ + + + L K +V+DEADR+L +F ++
Sbjct: 121 RSPHIIVSTPGRLADLLRTQIAAQEANVTDKQEWTLSRTKVVVLDEADRLLEDNFGKDLT 180
Query: 669 KILRAIPRERHTYLFSA 719
I++A+P+ R T L A
Sbjct: 181 IIMKALPKRRQTLLLVA 197
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 137 bits (332), Expect = 2e-31
Identities = 69/175 (39%), Positives = 113/175 (64%), Gaps = 5/175 (2%)
Frame = +3
Query: 228 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENP-QRYF----ALI 392
K++KP+ +Q P+AL G D++G+++TGSGKT +F LP ++ +L P Q Y+ L+
Sbjct: 158 KFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLV 217
Query: 393 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL 572
+ PTRELA QI+++ E + ++ A I GG +Q L LS++P I++ TPGR++D +
Sbjct: 218 VAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFM 277
Query: 573 ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
E + +L+ + +LV+DEADR++ M FE ++D I +I +R +SAT KV
Sbjct: 278 E-SGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKKV 331
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 137 bits (332), Expect = 2e-31
Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Frame = +3
Query: 114 SEVEQTPTENVTEDTEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 287
S+VE E V + K + F+ +G+ + + + +K P+ IQ++ IPV L GK
Sbjct: 75 SDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGK 134
Query: 288 DIIGLAETGSGKTGAFALPILQALLENPQRYFA--LILTPTRELAFQISEQFEALGASIG 461
D++ +A TGSGKT F LP+ + L + + A LIL+PTRELA Q + + LG G
Sbjct: 135 DVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTG 194
Query: 462 VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 641
+K A+I+GG M Q L + P IIIATPGRLV H+ L+ ++Y+V DEADR+
Sbjct: 195 LKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVVFDEADRLF 253
Query: 642 NMDFEVEVDKILRAIPRERHTYLFSATM 725
M F ++ +I+ +P T LFSAT+
Sbjct: 254 EMGFAEQLQEIIARLPGGHQTVLFSATL 281
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 137 bits (332), Expect = 2e-31
Identities = 71/205 (34%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 117 EVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDII 296
+V + + N E T+ K +F G+ ++ + +++P+ IQ++ IP+ L +DI+
Sbjct: 119 DVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIV 178
Query: 297 GLAETGSGKTGAFALPILQALLENPQRY--FALILTPTRELAFQISEQFEALGASIGVKC 470
G+A TGSGKT AF LP+++ L + + A+IL+P+RELA Q F+ ++
Sbjct: 179 GMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRS 238
Query: 471 AVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 650
++ GG + Q M+ P +IIATPGR + HL+ +L+ ++Y+V DEADR+ M
Sbjct: 239 VLLTGGDSLEEQFGMMMTNPDVIIATPGRFL-HLKVEMNLDLKSVEYVVFDEADRLFEMG 297
Query: 651 FEVEVDKILRAIPRERHTYLFSATM 725
F+ +++++L ++P R T LFSAT+
Sbjct: 298 FQEQLNELLASLPTTRQTLLFSATL 322
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 137 bits (331), Expect = 3e-31
Identities = 74/192 (38%), Positives = 117/192 (60%), Gaps = 4/192 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F +L + L + L +++P+ IQ +AIP+ L G D++ A+TG+GKT +FALPI++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 354 ALLENP----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
L +NP + AL+L PTRELA Q+++ G +G++ + GG+ + Q L
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ I++ATPGRL+D L K +L L+YLV+DEADR+L++ F + KI+ +R
Sbjct: 125 RGTDILVATPGRLLDLLRQ-KAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQ 183
Query: 702 TYLFSATMTXKV 737
T LF+AT V
Sbjct: 184 TLLFTATADESV 195
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 137 bits (331), Expect = 3e-31
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG-KDIIGLAETGSGKTGAFALPI 347
+TF DLG+ L ++ E PS+IQ++AIPV L K+++G+A+TG+GKT AF LP+
Sbjct: 1 MTFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPV 60
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 524
LQ + + Q+ L+L PTREL Q+++ I + + GG + Q L
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLET 120
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
HI++ATPGRL+D L K NL LKYL++DEAD +LNM F ++DKI++
Sbjct: 121 PKHILVATPGRLLD-LIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARK 179
Query: 705 YLFSATM 725
LF++T+
Sbjct: 180 LLFTSTL 186
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 137 bits (331), Expect = 3e-31
Identities = 76/183 (41%), Positives = 112/183 (61%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F D + D + A E +K+PS +QK+AIP+ L G D+I A+TG+GKT AF LPI+ +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIM-S 61
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
+++ L++ PTRELA Q+S++ G G+K A + GG Q + K+ I
Sbjct: 62 MMKADGSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERI-KQASI 120
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
++ATPGRL D L + K L P ++V+DEAD +L+M F E+ I +P+ER T +FS
Sbjct: 121 VVATPGRLQDLLMSGK-IKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFS 178
Query: 717 ATM 725
ATM
Sbjct: 179 ATM 181
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 137 bits (331), Expect = 3e-31
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 4/191 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F LG+ L +A EL + P+ IQ +AIP L GK+++ A+TG+GKT +F LP+L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 357 LLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 524
+ P+R A+ILTPTRELA Q+ E + + + GG+D Q L +
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
+++ATPGRL+D + + + LV+DEADR+L+M F +++ I+ +P +R
Sbjct: 123 GVDLLVATPGRLLD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQN 181
Query: 705 YLFSATMTXKV 737
LFSAT++ +V
Sbjct: 182 LLFSATLSKQV 192
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 137 bits (331), Expect = 3e-31
Identities = 85/230 (36%), Positives = 133/230 (57%), Gaps = 16/230 (6%)
Frame = +3
Query: 87 AMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAI 266
++++ + S +Q ++T DT + DLG+ L +A ++ +K PS IQ + I
Sbjct: 102 SLDAQATESSTSKQEVNSHLTSDTN-----WSDLGLSRSLIKAVFDMGYKAPSIIQSKVI 156
Query: 267 PVALLGKDIIGLAETGSGKTGAFALPILQALLE--------------NPQRYF--ALILT 398
PVAL GKD++ AETGSGK+ AF +P LQ L+ QR ALIL
Sbjct: 157 PVALEGKDLLATAETGSGKSAAFLIPTLQRLITAGVIKQKDVDLTRGGNQRVGTKALILL 216
Query: 399 PTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLEN 578
PTRELA Q + F AL ++ +I GG+ + Q L + P+I+ ATPG+++D + N
Sbjct: 217 PTRELAAQCYDVFLALTQNLTQNGVLITGGVPVKEQEAKLRRMPYIVFATPGKVLDIMLN 276
Query: 579 TKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMT 728
+ ++ ++ +V+DEADR+L++ F+ E+ IL+ +ER T LFSAT+T
Sbjct: 277 SNCIHMDAIEIVVLDEADRLLDLGFKDELAHILQLCNKERQTMLFSATLT 326
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 137 bits (331), Expect = 3e-31
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 344
+K+ FKDL + + +A ++ +++ S IQ AIP L KD+ G A+TG+GKT AF +P
Sbjct: 2 EKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIP 61
Query: 345 ILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLS 521
+L+ + A+IL PTRELA Q++E+ L + + + GG + Q L
Sbjct: 62 LLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQ 121
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
K III TPGR++DH++ +L +K +++DEAD +L+M F +++ IL IP ER
Sbjct: 122 KGVQIIIGTPGRVMDHIDRGT-LSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQ 180
Query: 702 TYLFSATMTXKV 737
LFSAT+ ++
Sbjct: 181 FLLFSATLPQEI 192
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 137 bits (331), Expect = 3e-31
Identities = 71/186 (38%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F LG+ ++ + +K+P+ IQ++ IP+ L GKD++G+A TGSGKT AF LP+L+
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 354 ALLENPQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
L + + A+IL+P+RELA Q + + A ++ A++VGG + Q M+
Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSN 222
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
P IIIATPGR + HL+ +L ++Y+ DEADR+ + F +++++L ++P R T
Sbjct: 223 PDIIIATPGRFL-HLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLASLPSNRQTL 281
Query: 708 LFSATM 725
LFSAT+
Sbjct: 282 LFSATL 287
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 136 bits (330), Expect = 4e-31
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Frame = +3
Query: 210 EACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFAL 389
EA E+ + KKP+ IQ IP AL G+DIIG ++TG+GKT +F LPI+Q + Q A+
Sbjct: 15 EALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAI 74
Query: 390 ILTPTRELAFQISEQFEALGASIG--VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 563
I+ PTRELA+QI E+ +++ +K ++I GGMD Q + P I+I TPGR++
Sbjct: 75 IVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRVKVSPQIVIGTPGRIL 134
Query: 564 DHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
D L + +K+ ++DEAD++L+M F EVD+I +A+P + +FSAT+ K+
Sbjct: 135 D-LFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMMVFSATIPEKL 191
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 136 bits (330), Expect = 4e-31
Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ + L A E + +P+ +Q+ AIP L G+D++ A+TG+GKTG FALPIL
Sbjct: 1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 351 QALL----------ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMV 500
+ L P++ L+LTPTRELA Q+ + F+ + A I GG+ M
Sbjct: 61 ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMN 120
Query: 501 AQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILR 680
Q ++K +++A PGRL+D L +L ++ LV+DEADR+L+M F +V K+L
Sbjct: 121 PQVQAMAKGVDVLVACPGRLLD-LAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLA 179
Query: 681 AIPRERHTYLFSATMTXKV 737
+P +R LFSAT + +
Sbjct: 180 RLPAKRQNLLFSATFSKDI 198
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 136 bits (330), Expect = 4e-31
Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F L + L ++ + ++IQ++AIPVAL +DIIG + TG+GKT AF +PIL
Sbjct: 1 MNFNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPIL 60
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 527
Q L + ++ A+IL PT ELA QI EQ + GV +I GG + Q L +K
Sbjct: 61 QNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYAL-RK 119
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
+II+ TPGR+ DH+ N K L +K +V+DEAD +L M F+ ++DK+ + P + T
Sbjct: 120 SNIIVGTPGRIADHI-NRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTL 178
Query: 708 LFSATMTXKV 737
LFSATM +V
Sbjct: 179 LFSATMPKQV 188
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 136 bits (330), Expect = 4e-31
Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 13/224 (5%)
Frame = +3
Query: 105 NQXSEVEQTPTE-NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL 281
++ EVE T ++ D +D + + + L + K+ KP+ IQ+ AIP+A+
Sbjct: 97 DELEEVEDTNGGLSINFDAYEDIPVEAKIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMA 156
Query: 282 GKDIIGLAETGSGKTGAFALPILQALLENPQRY--------FALILTPTRELAFQISEQF 437
G+D++ A+TGSGKT AF PI+ +L N ALIL+PTREL+ QI E+
Sbjct: 157 GRDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEA 216
Query: 438 EALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
+ G+K V GG + Q L + I++ATPGRLVD +E + +LR +KYL
Sbjct: 217 KKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERAR-VSLRMIKYLA 275
Query: 618 MDEADRILNMDFEVEVDKILRAI----PRERHTYLFSATMTXKV 737
+DEADR+L+M FE ++ KI+ + P R T LFSAT ++
Sbjct: 276 LDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEI 319
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 136 bits (330), Expect = 4e-31
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ +G+ + + ++ P+ IQ++A+P+ L G DI +A TGSGKT AF +P++Q
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 357 LLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
L + ALIL+PTR+LA Q + + LG +K ++IVGG M +Q L++ P
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP 170
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
IIIATPGRLV HL + NLR ++Y+V DEAD + ++ ++ IL + R T L
Sbjct: 171 DIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLL 230
Query: 711 FSATM 725
FSAT+
Sbjct: 231 FSATL 235
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 136 bits (329), Expect = 5e-31
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 9/196 (4%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG-KDIIGLAETGSGKTGAFALPILQ 353
F+ G+ + A ++ + P+ IQ++A+P+ L G D IGLA TG+GKT AF +P+++
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
+ + AL+L+PTRELA Q++EQ LG GV+ I GG Q + + H
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAH 165
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRA--------IP 689
I++ATPGRLVD LE K L+ +K +V+DEAD +L+M F+ ++ IL A +
Sbjct: 166 IVVATPGRLVDFLEQ-KMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPDDSDSVR 224
Query: 690 RERHTYLFSATMTXKV 737
T+LFSATM+ +V
Sbjct: 225 AACRTWLFSATMSSEV 240
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 136 bits (329), Expect = 5e-31
Identities = 74/189 (39%), Positives = 109/189 (57%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
I F D+ + + + A E + P+ +Q A A+ GKD+I ++TG+GKT AF LP+L
Sbjct: 29 IGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLL 88
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ + + +R ALIL PTRELA Q++++ + L G+K A I GG M Q L +
Sbjct: 89 EKIPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGT 148
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
II+ TPGR+ DH+ N L + V+DEAD +LN F EV +IL +P+ R L
Sbjct: 149 PIIVGTPGRVFDHI-NRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLL 207
Query: 711 FSATMTXKV 737
FSAT+ +
Sbjct: 208 FSATVPTDI 216
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 136 bits (329), Expect = 5e-31
Identities = 78/188 (41%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+ + + + E L + K + +Q++ IP AL +D++ A TGSGKT AF +P+LQ
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 357 LLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
LL + ALIL PTRELA Q+ +Q +AL G++ +I GG + QA + K
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQAALFRKN 121
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI--PRERH 701
P IIIATPGRL+DHL+ K + ++Y ++DEADR+L+M FE +V I A +
Sbjct: 122 PEIIIATPGRLIDHLKQKKDL-MEDVEYFILDEADRMLDMGFEEDVLTIANACSGKAKPQ 180
Query: 702 TYLFSATM 725
T LFSAT+
Sbjct: 181 TLLFSATL 188
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 136 bits (329), Expect = 5e-31
Identities = 74/185 (40%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF D+ + DVL + E ++ P+ +Q++AIP AL G+DI+ A+TG+GKT AF +P L+
Sbjct: 28 TFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALE 87
Query: 354 ALLE-NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
L + P LIL PTRELA Q+ +E L A+++GG Q +
Sbjct: 88 MLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRSGA 147
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
+++ATPGRL D++ + +L ++ LV+DEADR+++M F + +ILRA+PR++ T
Sbjct: 148 RVVVATPGRLEDYM-GRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALPRDKQTLC 206
Query: 711 FSATM 725
FSATM
Sbjct: 207 FSATM 211
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 136 bits (329), Expect = 5e-31
Identities = 75/203 (36%), Positives = 115/203 (56%), Gaps = 5/203 (2%)
Frame = +3
Query: 132 PTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAET 311
P+ + D F LG+ + L A E ++ P+ IQ +IPV L G D++G+A+T
Sbjct: 44 PSHRRSRDESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQT 103
Query: 312 GSGKTGAFALPILQALLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAV 476
G+GKT AF LPIL + N P+ AL+L PTRELA QI++ G AV
Sbjct: 104 GTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAV 163
Query: 477 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 656
++GG QA + +++ATPGRL+DH+ L ++ +V+DEAD++L++ F
Sbjct: 164 VIGGAKPGPQARRMESGVDLLVATPGRLLDHVA-AGVIRLDAVETVVLDEADQMLDLGFI 222
Query: 657 VEVDKILRAIPRERHTYLFSATM 725
+ +I+ +PR+R +FSATM
Sbjct: 223 PAIRQIMAKLPRQRQAVMFSATM 245
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 136 bits (329), Expect = 5e-31
Identities = 70/184 (38%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
++ +G+ + +A E+ + +P+ IQ++ IP + GKD++ ++ TGSGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 357 LLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L AL+++PTRELA Q + + LG G++CA +VGG + Q + + P
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
I++ATPGRL+ H+ L ++Y+V DEADR+ M F+ ++ + L+ IP R T LF
Sbjct: 146 ILLATPGRLL-HVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 714 SATM 725
SAT+
Sbjct: 205 SATL 208
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 136 bits (329), Expect = 5e-31
Identities = 68/187 (36%), Positives = 117/187 (62%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F++ + + L E+ + +P+++Q AIP+AL G D++ ++TGSGKT A+ +PI+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
+ + ALIL PTRELA Q+++ EALG G++ V+ GG+ + Q ++ + +I
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 537 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFS 716
I+ TPGR +D ++ N + Y V+DEAD +L+M F ++ KI+ +P ER ++LFS
Sbjct: 123 IVGTPGRTLDLIDRGI-LNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFS 181
Query: 717 ATMTXKV 737
AT+ ++
Sbjct: 182 ATIPSEI 188
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 136 bits (328), Expect = 7e-31
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 7/190 (3%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
T+ GV + ++ ++ KP+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+ +
Sbjct: 305 TWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFR 364
Query: 354 ALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
+L+ P+ A+IL PTRELA Q ++ +G+K A GG+ + Q L
Sbjct: 365 HILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
Query: 519 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
+ I++ TPGR++D L G NLR + YLV+DEADR+ + FE ++ K++ I
Sbjct: 425 KRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRP 484
Query: 693 ERHTYLFSAT 722
++ T LFSAT
Sbjct: 485 DKQTVLFSAT 494
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 136 bits (328), Expect = 7e-31
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 5/193 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 350
TF + G + + + + P+ IQ + P+AL G+D++G+AETGSGKT + LP +
Sbjct: 135 TFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIV 194
Query: 351 ----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
Q LL L+L PTRELA QI E+ + G S ++ + GG+ Q L
Sbjct: 195 HINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDL 254
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
S+ + IATPGRL+D LE K NLR + YLV+DEADR+L+M FE ++ KI+ I +R
Sbjct: 255 SRGVEVCIATPGRLIDMLEAGK-TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 313
Query: 699 HTYLFSATMTXKV 737
T ++SAT +V
Sbjct: 314 QTLMWSATWPKEV 326
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 135 bits (327), Expect = 9e-31
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F L + L +EL ++ + IQ+E+IP+ L GKDIIG A+TGSGKT AF+LPIL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 533
+ + ALIL PTRELA Q+ + LG + G+K + GG QA L
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
I++ TPGRL D + + +L +K +V+DEAD++L+M F E+ ++R +P R T LF
Sbjct: 169 IVVGTPGRLADFVGRNR-IDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLF 227
Query: 714 SATMTXKV 737
SAT +
Sbjct: 228 SATFPESI 235
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 135 bits (327), Expect = 9e-31
Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 3/188 (1%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+TF++L + L A EE + KP+ IQ EAIP LL KD++ A TG+GKT AF LP L
Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60
Query: 351 QALLENP---QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
Q LL++P ++ LIL PTRELAFQI + + LGA + V+ GG Q +L
Sbjct: 61 QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQ 120
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
K I++ATPGRL+ ++ + + +L ++ L++DEADR+L+M +V ++ AIP +
Sbjct: 121 SKIDILVATPGRLL-NIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIPGDFQ 179
Query: 702 TYLFSATM 725
FSAT+
Sbjct: 180 AACFSATL 187
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 135 bits (327), Expect = 9e-31
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 6/193 (3%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F D+ + + +A E ++ KP+ +Q++ IP+ L K++I A+TG+GKT AFALPI+
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 357 LLENP------QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
L + ++ AL++TPTRELA QI E F++ ++ + GG+ + Q +L
Sbjct: 63 LFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEIL 122
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
+K I++ATPGRL+D L+ +L L+ V+DEAD +L+M F ++ KI + PR++
Sbjct: 123 AKGVDILVATPGRLID-LQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKK 181
Query: 699 HTYLFSATMTXKV 737
T LFSAT+ K+
Sbjct: 182 QTLLFSATIPEKI 194
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 135 bits (327), Expect = 9e-31
Identities = 73/195 (37%), Positives = 117/195 (60%), Gaps = 6/195 (3%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F LG+ + A E +++P+ IQ++AIP L G+D++ A+TG+GKT F LP+L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 351 QALL------ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 512
Q L+ + + ALILTPTRELA QI E + ++ V+ GG+ + Q +
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
Query: 513 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
L +++ATPGRL+D LE+ L ++ LV+DEADR+L+M F ++ ++L +P
Sbjct: 121 KLRGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179
Query: 693 ERHTYLFSATMTXKV 737
+R LFSAT + +
Sbjct: 180 KRQNLLFSATFSDDI 194
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 135 bits (327), Expect = 9e-31
Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 2/199 (1%)
Frame = +3
Query: 135 TENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETG 314
T N+ T F+ +G+ L +A + P+ IQ+++IP+ L +D++G+A TG
Sbjct: 78 TTNLKGKTGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTG 137
Query: 315 SGKTGAFALPILQALLENPQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 488
SGKT AF +P+++ L + R ALI++P+RELA Q + + G +K ++VGG
Sbjct: 138 SGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGG 197
Query: 489 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 668
+ Q ++ P IIIATPGR + HL+ +L +KY+V DEADR+ M F ++
Sbjct: 198 DSLEDQFGFMTTNPDIIIATPGRFL-HLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLT 256
Query: 669 KILRAIPRERHTYLFSATM 725
+IL ++P R T LFSAT+
Sbjct: 257 EILHSLPPSRQTLLFSATL 275
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 135 bits (326), Expect = 1e-30
Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Frame = +3
Query: 231 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTR 407
++ + IQ +AIP L G+D++GLA+TG+GKT A+ALP+LQ L E P ALIL+PTR
Sbjct: 33 YRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTR 92
Query: 408 ELAFQISEQFEALGASIGVKCAVIVGG-MDMVAQALMLSKKPHIIIATPGRLVDHLENTK 584
+LA QI G ++CA I GG ++ Q +L+ II+A PGRL+D L+ K
Sbjct: 93 DLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQLLTGGVDIIVACPGRLLDLLQGKK 152
Query: 585 GFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L+ +K+LV+DEAD + + F + IL+ +P R LFSATM+ +
Sbjct: 153 NNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPRRQNLLFSATMSADI 203
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 135 bits (326), Expect = 1e-30
Identities = 73/189 (38%), Positives = 110/189 (58%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
++F D + L +L + +P+ IQ++AIP+ L G D+IG A+TG+GKT AF LP+L
Sbjct: 55 VSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL 114
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
+ + + AL+L PTRELA Q+ + G V+ GG AQ L +
Sbjct: 115 NNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGA 174
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
+++ TPGRL+D L L LK LV+DEAD +L+M F +++ IL P++R T L
Sbjct: 175 RVVVGTPGRLLD-LIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTML 233
Query: 711 FSATMTXKV 737
FSAT++ +V
Sbjct: 234 FSATLSSRV 242
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 135 bits (326), Expect = 1e-30
Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 4/212 (1%)
Frame = +3
Query: 114 SEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 293
S + +P + ++ ++ +TF+ L + + +E + P+ IQ IP L GKDI
Sbjct: 5 SAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDI 64
Query: 294 IGLAETGSGKTGAFALPILQALL--ENPQRY--FALILTPTRELAFQISEQFEALGASIG 461
+ A+TG+GKT AF LPI++ L + P+RY +L+LTPTRELA Q+ +A +
Sbjct: 65 MASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLA 124
Query: 462 VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 641
++ + GG+ + Q L I++ATPGRL+D L N K LK LV+DEADR+L
Sbjct: 125 LRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLD-LINQKMIRFDNLKVLVLDEADRML 183
Query: 642 NMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+M F ++ K++ +P+ R +FSAT + +
Sbjct: 184 DMGFIRDIKKVIEYLPKNRQNMMFSATFSTPI 215
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 135 bits (326), Expect = 1e-30
Identities = 80/193 (41%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 350
+F D+G D + + E+ + +P+ IQ + P+AL G+D+IG+AETGSGKT A+ LP +
Sbjct: 97 SFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTIAYLLPAIV 156
Query: 351 ----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 518
Q +L++ L+L PTRELA QI ++ GAS +K I GG+ Q L
Sbjct: 157 HVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDL 216
Query: 519 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRER 698
K I+IATPGRL+D LE+ NLR + +V+DEADR+L+M FE ++ K + P +R
Sbjct: 217 QKGVEIVIATPGRLIDMLESNH-TNLRRVT-IVLDEADRMLDMGFEPQIRKCISDTP-DR 273
Query: 699 HTYLFSATMTXKV 737
T +SAT V
Sbjct: 274 QTLYWSATWPKNV 286
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 135 bits (326), Expect = 1e-30
Identities = 85/232 (36%), Positives = 131/232 (56%), Gaps = 4/232 (1%)
Frame = +3
Query: 54 LIYRKCLQXRKAMESATNQXSEVEQ-TPTENVTEDTEDDKITFKDLGVV-DVLCEACEEL 227
++Y+K +Q ++ES ++ +++VT D + F+D+ +L + +
Sbjct: 95 ILYQKPIQSISSVESIKEYRAQHNIFIRSQHVT--VPDPIMRFEDVQCFPQMLMDLLLKA 152
Query: 228 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF--ALILTP 401
+K P+ IQ + +AL G D+IG+A+TGSGKT AF LP + +L + + LIL P
Sbjct: 153 GFKGPTAIQAQGWSIALTGHDLIGIAQTGSGKTLAFLLPAIVHILAQARSHDPKCLILAP 212
Query: 402 TRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENT 581
TREL QI +QF+ + A + GG D Q L K P I+IA PGRL+D L+
Sbjct: 213 TRELTLQIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQ- 271
Query: 582 KGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L+ + +LV+DEADR+L+M FE ++ KI+ I +R T LFSAT +V
Sbjct: 272 GCTTLKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEV 323
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 135 bits (326), Expect = 1e-30
Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
++++ G+ + EE+ +K+PS IQ++AIP+ L +D+IG+AETGSGKT +F +P+L
Sbjct: 268 SWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLA 327
Query: 354 ALLENPQ--------RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 509
+ + P+ ALIL PTRELA QI + +G++C IVGG DM QA
Sbjct: 328 YISKLPKLDEHTKALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQA 387
Query: 510 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIP 689
L I+IATPGRL D +E L Y+VMDEAD++++M FE +V+ IL ++P
Sbjct: 388 YALRDGAEIVIATPGRLKDCIER-HVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLP 446
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 135 bits (326), Expect = 1e-30
Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 4/188 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
TF +L + + L EA ++ + +P+ IQ AIP AL G+D++G A TG+GKT A+ LP LQ
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 354 ALLENPQRYFA----LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 521
LL+ P++ LILTPTRELA Q+S+ L + A I GG+ + A + S
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFS 124
Query: 522 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERH 701
+ I++AT GRL+ +++ + F+ R ++ L++DEADR+L+M F +++ I +
Sbjct: 125 ENQDIVVATTGRLLQYIKE-ENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQ 183
Query: 702 TYLFSATM 725
T LFSAT+
Sbjct: 184 TLLFSATL 191
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 135 bits (326), Expect = 1e-30
Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
I F+ + +VL ++ ++ P+ IQ + IPV LLG+DI+ A+TGSGKT AF LP++
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 527
L + ALILTPTRELA QI Q + L + + +K ++VGG+ + Q L +
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH 322
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTY 707
+IIATPGRL+D ++ + L +K +V+DEAD +L M F+ +V IL IP + T
Sbjct: 323 VKVIIATPGRLLDIIKQS-SVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTI 381
Query: 708 LFSATMTXKV 737
L SAT+ +
Sbjct: 382 LVSATIPTSI 391
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 134 bits (325), Expect = 2e-30
Identities = 76/193 (39%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Frame = +3
Query: 162 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 341
+ ++FK LG+ L +A + L + KP+ IQ +AIP L GKD+ G+A+TG+GKT AFAL
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 342 PILQALLENPQR-----YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 506
P + L NPQ LIL+PTRELA QI+ + + + GG+ + Q
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 507 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
ML + I++ATPGRL+D L + + L+ ++ V+DEAD++L++ F + +I + +
Sbjct: 123 MRMLDRGTDILVATPGRLLD-LIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLL 181
Query: 687 PRERHTYLFSATM 725
P+ R T FSATM
Sbjct: 182 PKNRQTLFFSATM 194
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,400,988
Number of Sequences: 1657284
Number of extensions: 16170883
Number of successful extensions: 48154
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 44034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46146
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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