Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_P21
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 233 1e-61
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 209 2e-54
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 141 5e-34
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 130 2e-30
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 130 2e-30
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 1e-28
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 7e-27
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 113 1e-25
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 101 5e-22
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 97 1e-20
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 95 5e-20
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 93 3e-19
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 91 9e-19
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 77 1e-14
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 75 6e-14
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 73 2e-13
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 73 3e-13
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 3e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 3e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 51 9e-07
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 50 2e-06
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 50 3e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 48 1e-05
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 45 6e-05
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 40 0.002
SB_49640| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 36 0.026
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 35 0.060
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 34 0.10
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_10015| Best HMM Match : DEAD (HMM E-Value=2.2e-34) 32 0.42
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.42
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 32 0.56
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_22474| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 29 3.9
SB_4907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_5528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_55052| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_55088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 233 bits (570), Expect = 1e-61
Identities = 112/126 (88%), Positives = 121/126 (96%)
Frame = +3
Query: 285 KDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGV 464
KD+IGLAETGSGKTGAFALPILQALL+NPQR FALILTPTRELAFQISEQ EALG+ IGV
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 465 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 644
KCAVIVGG+DM++QALML+KKPHIIIATPGRL+DHLENTKGF+LR LKYLVMDEADRILN
Sbjct: 62 KCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILN 121
Query: 645 MDFEVE 662
MDFE E
Sbjct: 122 MDFEKE 127
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 209 bits (510), Expect = 2e-54
Identities = 100/185 (54%), Positives = 136/185 (73%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F LG+ L C + KKP++IQ +P L G+D IG A+TGSGKT AFALPILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 354 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 533
L ++P FA++LTPTRELAFQI++QF+ LG IG+K AVIVGG+DM+ QAL L+ KPH
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPH 127
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
++IATPGRL DH+++T NL+ +++LV+DEADR+L+ F ++ I A+P +R T LF
Sbjct: 128 VVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLF 187
Query: 714 SATMT 728
SAT+T
Sbjct: 188 SATLT 192
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 141 bits (342), Expect = 5e-34
Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 4/226 (1%)
Frame = +3
Query: 72 LQXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKI 251
+ +K+ + + ++E E + + E F D + + + + P+ I
Sbjct: 21 IDKKKSWDKEQQEMKDLEDRCKEIGSSEVEK----FSDFPISKRTLDGLMKAGFVTPTDI 76
Query: 252 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTRELAF 419
QK+ IPVAL G+D++G A+TGSGKT AF +PI++ L AL+++PTRELA+
Sbjct: 77 QKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAY 136
Query: 420 QISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLR 599
Q E +G + +I+GG D+ + + K +I++ TPGRL+ H++ T F+
Sbjct: 137 QTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMKT-NIVVCTPGRLLQHMDETPNFDCT 195
Query: 600 PLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
L+ LV+DEADRIL+M F ++ I+ +P ER T L+SAT T V
Sbjct: 196 SLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSV 241
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 136 bits (330), Expect = 1e-32
Identities = 78/214 (36%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
Frame = +3
Query: 108 QXSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 287
+ +E P+E D+ + +D V + + +++ + ++IQ ++I L G+
Sbjct: 553 ERTEESTLPSEAALPDSHEFSALSED--VSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGR 610
Query: 288 DIIGLAETGSGKTGAFALPILQAL----LENPQRYFALILTPTRELAFQISEQFEALGAS 455
D++G A+TGSGKT AF +P+++ L + +I++PTREL+ Q L
Sbjct: 611 DLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKH 670
Query: 456 IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADR 635
+I+GG++ A+A L K +++IATPGRL+DHL+NT+GF + L+ LV+DEADR
Sbjct: 671 HNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADR 730
Query: 636 ILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
IL + FE E+ +I+R +P +R T LFSAT T V
Sbjct: 731 ILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNV 764
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 130 bits (313), Expect = 2e-30
Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 10/226 (4%)
Frame = +3
Query: 90 MESATNQXSEVEQTPTEN--VTEDTEDDKIT-FKDLGVVDVLCEACEELKWKKPSKIQKE 260
+E++ + + ++ P +N T D K F+D + L E + KPS IQ+E
Sbjct: 17 LENSESWKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEE 76
Query: 261 AIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFE 440
+IPVAL G+DI+ A+ G+GKT A+ +P+L+ AL+L PTRELA Q S+
Sbjct: 77 SIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICI 136
Query: 441 ALGASIGVKCAVIVGGMDMVAQALMLSKKP-------HIIIATPGRLVDHLENTKGFNLR 599
LG +G + V GG + L L K H+I+ATPGR++D L K ++
Sbjct: 137 ELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLD-LMKKKLADMS 195
Query: 600 PLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+ LVMDEAD++L+MDF+ +++I++ +P R LFSAT V
Sbjct: 196 KCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISV 241
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 130 bits (313), Expect = 2e-30
Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 10/226 (4%)
Frame = +3
Query: 90 MESATNQXSEVEQTPTEN--VTEDTEDDKIT-FKDLGVVDVLCEACEELKWKKPSKIQKE 260
+E++ + + ++ P +N T D K F+D + L E + KPS IQ+E
Sbjct: 17 LENSESWKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEE 76
Query: 261 AIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFE 440
+IPVAL G+DI+ A+ G+GKT A+ +P+L+ AL+L PTRELA Q S+
Sbjct: 77 SIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICI 136
Query: 441 ALGASIGVKCAVIVGGMDMVAQALMLSKKP-------HIIIATPGRLVDHLENTKGFNLR 599
LG +G + V GG + L L K H+I+ATPGR++D L K ++
Sbjct: 137 ELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLD-LMKKKLADMS 195
Query: 600 PLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+ LVMDEAD++L+MDF+ +++I++ +P R LFSAT V
Sbjct: 196 KCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISV 241
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 124 bits (298), Expect = 1e-28
Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 5/166 (3%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
I+F G + + + +L++ +P++IQ +A+P+AL G+DIIG+A+TGSGKT AF P L
Sbjct: 517 ISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 576
Query: 351 QALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 515
+++ P+ LI PTREL QI + G + + + GG + Q+
Sbjct: 577 VHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKA 636
Query: 516 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDF 653
L + I++ATPGRL+DH++ K NL + YLV DEADR+ +M F
Sbjct: 637 LQEGAEIVVATPGRLIDHVK-AKATNLHRVTYLVFDEADRMFDMGF 681
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 122 bits (294), Expect = 3e-28
Identities = 70/215 (32%), Positives = 120/215 (55%), Gaps = 10/215 (4%)
Frame = +3
Query: 123 EQTPTENVTEDTEDDKIT-FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIG 299
E P++ V+ + + KIT F +L + L +++P+ +QK A+P+ + G+D++
Sbjct: 463 ENIPSK-VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
Query: 300 LAETGSGKTGAFALPILQALLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGV 464
A+TGSGKT A+ LP+L +L++ P+ AL + PTRELA QI + +
Sbjct: 522 CAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPI 581
Query: 465 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 644
K V GG+ + QA L + H ++ TPGRL D + K + L +++L++DEADR+L+
Sbjct: 582 KVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIY-LGSIQHLILDEADRMLD 640
Query: 645 MDFEVEVDKILR----AIPRERHTYLFSATMTXKV 737
+ F ++ K++ R T +FSAT ++
Sbjct: 641 LGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEI 675
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 120 bits (289), Expect = 1e-27
Identities = 63/169 (37%), Positives = 99/169 (58%)
Frame = +3
Query: 231 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRE 410
++KPS IQ+ AI L G+D+I A++G+GKT F++ +LQA+ + AL+L+PTRE
Sbjct: 17 FEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRE 76
Query: 411 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 590
LA QI + ALG + V+C +GG ++ L HI+ TPGR+ D + +
Sbjct: 77 LANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRR-RNL 135
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
R +K LV+DEAD +LN F+ ++ + R +P L SAT+ ++
Sbjct: 136 RTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEI 184
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 118 bits (283), Expect = 7e-27
Identities = 64/201 (31%), Positives = 114/201 (56%), Gaps = 13/201 (6%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F++ + + + ++KKP+ +QK +IP+ + G+D++ A+TGSGKT AF LP++
Sbjct: 712 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMT 771
Query: 354 ALL---------ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 506
+++ Q A+ + PTRELA QI + ++ V GG+ + Q
Sbjct: 772 SMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQ 831
Query: 507 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
L ++++ TPGRL D +E K +L+ L++L++DEADR+L+M FE + +I+ ++
Sbjct: 832 LRQLQSGCNLLVGTPGRLTDFIEKGK-VSLKGLQFLILDEADRMLDMGFEPAIRRIVESM 890
Query: 687 ----PRERHTYLFSATMTXKV 737
ER T +FSAT ++
Sbjct: 891 GMPDKSERQTLMFSATFPEEI 911
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 113 bits (273), Expect = 1e-25
Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Frame = +3
Query: 138 ENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGS 317
+ T+ +++I F L + L E ++KPS IQ +AIP+ G D+I A++G+
Sbjct: 2 KRTTDVLIEEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGT 61
Query: 318 GKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMD 494
GKT F++ L+ ++ +ILTPTRE+A Q+ + A+G G+ C V +GG+
Sbjct: 62 GKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGIS 121
Query: 495 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKI 674
+ L K HI + TPGR V +L K ++ ++DEAD++L+ F+ +++ I
Sbjct: 122 LEEDKKAL-KSCHIAVGTPGR-VKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWI 179
Query: 675 LRAIPRERHTYLFSAT 722
A+P + FSAT
Sbjct: 180 FSALPENKQMMAFSAT 195
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 101 bits (243), Expect = 5e-22
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+D + L A + ++ PS++Q E IP A+LG DII A++G GKT F L LQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVA-QALMLSKKP 530
L + L++ TRELAFQI +++E + +K AV GG+++ Q + + P
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 641
HI++ TPGR++ L K NL+ K+ ++DE D++L
Sbjct: 169 HIVVGTPGRIL-ALTREKTLNLKHAKHFILDECDKML 204
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 101 bits (243), Expect = 5e-22
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
F+D + L A + ++ PS++Q E IP A+LG DII A++G GKT F L LQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 357 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVA-QALMLSKKP 530
L + L++ TRELAFQI +++E + +K AV GG+++ Q + + P
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 641
HI++ TPGR++ L K NL+ K+ ++DE D++L
Sbjct: 169 HIVVGTPGRIL-ALTREKTLNLKHAKHFILDECDKML 204
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 100 bits (239), Expect = 1e-21
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Frame = +3
Query: 276 LLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF------ALILTPTRELAFQISEQF 437
L +D+I A++G+GKT FA+ ILQ + N + AL+L PTRELA QI +
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVV 179
Query: 438 EALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLV 617
ALG + VKC +GG ++ + L + H+++ TPGR+ D + N N R +K V
Sbjct: 180 LALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMI-NRGVLNTRDIKLFV 238
Query: 618 MDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
+DEAD +L+ F+ ++ + +P L SATM V
Sbjct: 239 LDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDV 278
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 97.5 bits (232), Expect = 1e-20
Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 11/159 (6%)
Frame = +3
Query: 282 GKDIIGLAETGSGKTGAFALPILQALLE---NPQRYFA---LILTPTRELAFQISEQFEA 443
G+D+IG A TG+GKT +FALP+++ L + + +R A L++ PTRELA Q+ +FE
Sbjct: 110 GEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFEN 169
Query: 444 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMD 623
L +++ V C I GGM Q ++ +++ TPGR++D + +L LK++V+D
Sbjct: 170 LKSNLEVYC--IYGGMPYEPQENAINSGLDVLVGTPGRILDFMRQGT-LDLSKLKHVVLD 226
Query: 624 EADRILNMDFEVEVDKILRAIPRE-----RHTYLFSATM 725
E DR+L+M F V+++L A E T LFSAT+
Sbjct: 227 EVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATL 265
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 96.7 bits (230), Expect = 2e-20
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 5/194 (2%)
Frame = +3
Query: 171 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 350
+ F+D+ + ++L +KKP+ +QK AIP+ +D++ A+TGSGKT AF +PIL
Sbjct: 875 LQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPIL 934
Query: 351 QAL-LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 527
+ +E P P + +++ S+ C V+ GG D+ +Q L +
Sbjct: 935 SRIYMEGPP-------APP-DFSYR----------SLCRPC-VVYGGADIGSQLRELDRN 975
Query: 528 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKIL--RAIPRE-- 695
H+++ATPGRLVD ++ + L +++LV+DEADR+L+M FE ++ +I+ ++P+
Sbjct: 976 CHLLVATPGRLVDMMDRGR-VGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGI 1034
Query: 696 RHTYLFSATMTXKV 737
R T +FSAT ++
Sbjct: 1035 RQTLMFSATFPKEI 1048
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 9/115 (7%)
Frame = +3
Query: 177 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 356
+K+ + D + E ++L +K P+ IQ++AIP+ L +DIIG+AETGSGKT AFA+P+L
Sbjct: 103 WKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVW 162
Query: 357 LLENP---------QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 494
++ P Q +ALIL PTRELA QI E+ G +G++ ++GG D
Sbjct: 163 IMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +3
Query: 423 ISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR-LVDHLENTKGFNLR 599
++E A+ + V + G+ + + + P+ +I P R L +E R
Sbjct: 144 VAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGR 203
Query: 600 PL---KYLVMDEADRILNMDFEVEVDKILRAIP 689
PL V+ ADR+++M FE EV KIL +P
Sbjct: 204 PLGIRTVSVIGGADRMIDMGFEPEVQKILEHLP 236
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 92.7 bits (220), Expect = 3e-19
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 30/222 (13%)
Frame = +3
Query: 150 EDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 329
ED +F DL + L + ++ P+ IQ +++ + G+DIIGLAETGSGKT
Sbjct: 65 EDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTL 124
Query: 330 AFALPILQALL----ENP-QRYFALILTPTRELAFQ----ISEQFEAL------GAS--- 455
A++LP+ L NP ALILTPTREL Q +SE + + G S
Sbjct: 125 AYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQS 184
Query: 456 ---------IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLK 608
K + GG+ + Q + L + +++ATPGRL+D L +
Sbjct: 185 VIYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD---------LYKIT 235
Query: 609 YLVMDEADRILNMDFEVEVDKIL---RAIPRERHTYLFSATM 725
YLVMDE DR+L M E ++ KI+ R R T L+SAT+
Sbjct: 236 YLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATL 277
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 91.1 bits (216), Expect = 9e-19
Identities = 54/129 (41%), Positives = 74/129 (57%)
Frame = +3
Query: 351 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 530
Q LL+ L+L PTRELA Q+ E ++G ++ I GG Q L +
Sbjct: 124 QPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGV 183
Query: 531 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYL 710
I IATPGRL+D LE+ K NLR YLV+DEADR+L+M FE ++ I+ I +R T +
Sbjct: 184 EICIATPGRLIDMLESRK-TNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLM 242
Query: 711 FSATMTXKV 737
+SAT +V
Sbjct: 243 WSATWPKEV 251
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 90.6 bits (215), Expect = 1e-18
Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 20/152 (13%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL-GKDIIGLAETGSGKTGAFAL 341
D ++ LGV + A + + KP+ IQ +IP ALL +DIIG AETGSGKT AF +
Sbjct: 128 DMPEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGI 187
Query: 342 PILQALL--------ENP---------QRY--FALILTPTRELAFQISEQFEALGASIGV 464
PI+Q + ++P Q Y ALI+ PTRELA Q+ + V
Sbjct: 188 PIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSV 247
Query: 465 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRL 560
K A IVGGM Q +L ++P I++ATPGRL
Sbjct: 248 KVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Score = 38.7 bits (86), Expect = 0.005
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 327 GAFALPILQALLENPQRYFALILTPTR--ELAFQISEQFEALGASIGVKCAVIVGGMDMV 500
G A P Q LL+ QR ++ TP R EL Q+ + L + A IV + +V
Sbjct: 254 GGMAAPKQQRLLK--QRPEIVVATPGRLWELISQVFTHGKPLLYTHSTAAAAIVAIVAVV 311
Query: 501 AQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILR 680
A A+++ +++ V + E N++ L+YLV+DEADR++ E+ IL
Sbjct: 312 AVAVVV-----VVVVVVDTSVTNQEKHVS-NIQLLRYLVIDEADRMVEQGHYEELSSILE 365
Query: 681 AI 686
I
Sbjct: 366 LI 367
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 83.4 bits (197), Expect = 2e-16
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 9/197 (4%)
Frame = +3
Query: 72 LQXRKAMESATNQXSEVEQTPTE--NVTEDTED--DKITFKDLGVVDVLCEACEELKWKK 239
+Q RK SA + S+ ++ E V + +D + +++ +D ++ K KK
Sbjct: 241 IQHRKERRSAKRKASKEDEEALEFLEVGNEVKDVVESDNEEEINELDTRKLVSQQNKKKK 300
Query: 240 PS---KIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF--ALILTPT 404
S + + +P+ + GKD++ +A TGSGKT AF +P+ + L + + ALIL+PT
Sbjct: 301 KSGGFQSLGKTLPLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPT 360
Query: 405 RELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTK 584
RELA Q + + LG G+K +VI+GG ++ATPGR + H+
Sbjct: 361 RELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFL-HVVMEM 405
Query: 585 GFNLRPLKYLVMDEADR 635
L ++Y+V DEADR
Sbjct: 406 ELKLSSVEYVVFDEADR 422
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 79.0 bits (186), Expect = 4e-15
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Frame = +3
Query: 384 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 563
A+++TPTRELA QI + + ++C + GG + Q L + II+ TPGR++
Sbjct: 147 AIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 206
Query: 564 DHL--ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDK--------ILRAIPRERHTYLF 713
D L N + N + YLV+DEADR+ +M FE ++ K I+ I +R T +F
Sbjct: 207 DMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMF 266
Query: 714 SAT 722
SAT
Sbjct: 267 SAT 269
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 77.4 bits (182), Expect = 1e-14
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI--IGLAETGSGKTGAFALPI 347
+F++L + L ++ + KPSKIQ+ A+P+ L + I +++G+GKT AF L +
Sbjct: 104 SFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTM 163
Query: 348 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSK 524
L + + L+PT ELA Q + EA+G +K V G
Sbjct: 164 LSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD- 222
Query: 525 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD-FEVEVDKILRAIPRERH 701
HIII TPG L+D + +K F R + V+DEAD ++ + + + +I +++ ++
Sbjct: 223 --HIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQ 280
Query: 702 TYLFSAT 722
LFSAT
Sbjct: 281 VLLFSAT 287
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 74.9 bits (176), Expect = 6e-14
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 353
+F LG+ D + +A + L +P+ IQ IP + +I A+TGSGKT A+ P++
Sbjct: 379 SFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVH 438
Query: 354 ALLENPQRY---------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 506
L E+ +R+ A I+ P RELA QI + ++L + ++GG
Sbjct: 439 RLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWM 498
Query: 507 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAI 686
L +++ATPG L+ + + + F L +LV+DEAD + + F+ +IL I
Sbjct: 499 RDDLESPVDLLVATPGTLLKYRQKDRLF-FSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +3
Query: 213 ACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-- 386
A EL + P+ IQ IPVAL+GKD+ A TG+GKT AF LPIL+ LL P + A
Sbjct: 24 AVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIR 83
Query: 387 -LILTPTRELAFQ 422
L++TPTRELA Q
Sbjct: 84 VLVITPTRELAIQ 96
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 72.5 bits (170), Expect = 3e-13
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Frame = +3
Query: 150 EDTEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 323
E +D +I+ F + GV L E +++ KP IQ++A+P K ++ +ETG+GK
Sbjct: 151 ESFQDSEISCEFSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGK 210
Query: 324 TGAFALPILQALLENPQR-YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMV 500
+ F LP +Q +P R Y +I+ PTRELA Q+ + L + A V G+D+
Sbjct: 211 SLVFLLPSVQ----DPGRGYGTIIVVPTRELASQMLYEVSRLLGDKSI-VASFVSGVDLS 265
Query: 501 AQALMLSKK---PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 641
Q +L P I+I TP RL + ++ + R K +V+DE D+ L
Sbjct: 266 RQEKLLKDSLHPPRIVIGTPKRLWEIVQEHEHLFQR-TKRIVIDEVDKTL 314
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
N+ P +YLV+DEADR+++M FE +V I +R T LFSATM K+
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKI 61
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
N+ P +YLV+DEADR+++M FE +V I +R T LFSATM K+
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKI 61
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 51.2 bits (117), Expect = 9e-07
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Frame = +3
Query: 384 ALILTPTRELAFQISEQFEALGASIGVKCAVIV-GGMDMVAQALMLSKKPHIIIATPGRL 560
A++++PTRELA QI +F L + V+ SK+ I++ TP RL
Sbjct: 208 AVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRL 267
Query: 561 VDHL-ENTKGFNLRPLKYLVMDEADRILNM---DFEVEVDKILRAIPR-ERHTYLFSATM 725
V L + G L +++L++DEAD++ F ++ I +A + + H LFSAT+
Sbjct: 268 VHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATL 327
Query: 726 T 728
+
Sbjct: 328 S 328
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 360 LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHII 539
L PQ AL+L+PTRELA QI + ALG + V+C +GG ++ L HI+
Sbjct: 1 LREPQ---ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIV 57
Query: 540 IATPGRL 560
TPGR+
Sbjct: 58 SGTPGRV 64
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +3
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLF 713
+I+ATPGR+V+ + + +L + V+DE D +L + FE +V +IL + R T LF
Sbjct: 258 VIVATPGRMVEIISR-QAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLF 316
Query: 714 SATM 725
SAT+
Sbjct: 317 SATI 320
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 231 WKKPSKIQKEAIPVALLGKDIIGLAETGSGK 323
+ P+ IQ + +PV L G+D++ A TGSGK
Sbjct: 216 YHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 47.6 bits (108), Expect = 1e-05
Identities = 17/51 (33%), Positives = 34/51 (66%)
Frame = +3
Query: 174 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKT 326
+F++ + + + ++KKP+ +QK +IP+ + G+D++ A+TGSGKT
Sbjct: 135 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +3
Query: 600 PLKYLVMDEADRILNMDFEVEVDKILRAIPRERHTYLFSATMTXKV 737
P++ LV+DEADR+L+M F ++ ++L +P +R LFSAT + +
Sbjct: 3 PVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDI 48
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 240 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN 368
P+ +QK P L G+D+ G+A GSGK A+ LPI+ + E+
Sbjct: 210 PTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_49640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1177
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +3
Query: 285 KDIIGLAETGSGKTGAFALPILQALL---ENPQRYFALILTPTRELAFQISEQFEALGAS 455
+ ++ A TGSGKT F L I++ ++ E+ +R + + P + L + + A
Sbjct: 351 RPLVVCAPTGSGKTVIFELAIIRLIMKSAEDIRRTKIIYMAPMKALCSERCTDWAAKFGP 410
Query: 456 IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVD 566
+G+KC + G D + +I++ TP L++
Sbjct: 411 LGIKCKEVTG--DSELDDYFEIRDVNIVMTTPVHLLN 445
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 36.3 bits (80), Expect = 0.026
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = +3
Query: 303 AETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFE-ALGASIGVKCAVI 479
A TGSGKT +L+ L ++P+ + +TP + LA Q+ ++ G +G ++
Sbjct: 1993 APTGSGKTICAEFAVLRFLQQSPEGR-CVYVTPIQALAEQVYADWQNKFGLQLGKNVVML 2051
Query: 480 VGGMDMVAQALMLSKKPHIIIATPGRLVDHLEN--TKGFNLRPLKYLVMDEADRI 638
G + L L K +++++TP + D L + N++ + +MDEA I
Sbjct: 2052 TG---ETSADLKLLAKGNVVVSTPEKW-DVLSRRWKQRKNVQNVSLFIMDEAHLI 2102
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 534 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDKILRAIPR 692
I+ TPG+L D + K +L +K+ ++DEAD +L + KI IP+
Sbjct: 138 IVTGTPGKLNDFITTDK-ISLHQVKFFILDEADGLLAQGNNDLIMKIYNKIPK 189
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 34.7 bits (76), Expect = 0.079
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 165 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL-GKDIIGLAET 311
D ++ LGV + A + + KP+ IQ +IP ALL +DIIG AET
Sbjct: 70 DMSEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 34.3 bits (75), Expect = 0.10
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +3
Query: 249 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQIS 428
+Q++AI L KD + L TG+GKT +A+P ALL N +++TP L +S
Sbjct: 143 MQRQAIDTLLAEKDSLILLPTGAGKTICYAIP---ALLLNG---VTIVITPLLAL---LS 193
Query: 429 EQFEALGASIGVKCAVI 479
+Q + L S+G+ I
Sbjct: 194 DQVQRL-RSLGINACFI 209
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 462 VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVD 566
VKC +GG ++ + L + H+++ TPGR+ D
Sbjct: 3 VKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 37
>SB_10015| Best HMM Match : DEAD (HMM E-Value=2.2e-34)
Length = 629
Score = 32.3 bits (70), Expect = 0.42
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +3
Query: 285 KDIIGLAETGSGKTGAFALPILQALLEN-------PQRYFALILTPTRELAFQISEQFEA 443
++++ A TG+GKT + I++ + +N ++ + + P + LA ++ F
Sbjct: 405 ENLLICAPTGAGKTNIAMMTIVREIKQNIEQGVIKKDKFKIVYVAPMKALAAEMVRNFSK 464
Query: 444 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRL-VDHLENTKGFNLRPL-KYLV 617
A +G+ + G M + ++ K +++ TP + V ++T L L K L+
Sbjct: 465 RLAGLGISVRELTGDMQLTKMEIL---KTQMLVTTPEKWDVVTRKSTGDVALAQLVKLLI 521
Query: 618 MDE 626
+DE
Sbjct: 522 IDE 524
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 597 RPLKYLVMDEADRILNMDFEVEVDKILRAIP 689
R +K LV+DEAD +LN F+ ++ + R +P
Sbjct: 34 RSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 64
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 31.9 bits (69), Expect = 0.56
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Frame = +3
Query: 240 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAF 419
P Q+E A+ ++ L TGSGKT A+ I L NP + A+ + LA
Sbjct: 173 PRDYQRELFISAIQRNSLVYLP-TGSGKTLVAAMVISCMLKLNPDK-MAVFVVDRINLAH 230
Query: 420 QISEQFEALGASIGVKCAVIVGGMD--------MVAQALMLSKKP-HIIIATPGRLVDHL 572
Q S + + VK +V G D M A L++K +++ T L++HL
Sbjct: 231 QQSAYIQKQCPKLNVK--TLVAGNDPNPNHEAEMSAVLGALARKQIDVLVLTHQILLNHL 288
Query: 573 ENTKGFNLRP-LKYLVMDEA 629
+ +G P + LV DEA
Sbjct: 289 ADDEGLIRMPNICALVFDEA 308
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 591 NLRPLKYLVMDEADRILNMDFEVEVDKILRAIPRERHT 704
N++ L+YLV+DEADR++ E+ IL I ++++
Sbjct: 7 NVQLLRYLVIDEADRMVEQGHYEELSSILELIHLKKYS 44
>SB_22474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3
Query: 204 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKT-GAFALPILQALL----EN 368
LCE E+++ + K+ + V+L + G ETGSG T LP+ + +
Sbjct: 108 LCELMEQIQMYREMTAVKDQVVVSLTNQGTQGEVETGSGNTPRVLPLPVSASPWVSEDKQ 167
Query: 369 PQRYFALILTPTR 407
P + L+ +PTR
Sbjct: 168 PGKSLELLTSPTR 180
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 31.5 bits (68), Expect = 0.74
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Frame = +3
Query: 252 QKEAIPVALLGKDIIGLAETGSGKTGA---FALPILQALLENPQRYFALILTPTRELAFQ 422
QKE AL G + + A T SGKT A L E Q L + T L Q
Sbjct: 293 QKELSEKALEGHNTVICAPTNSGKTYVALNIARNHLDKKKEQEQEGKVLFIVSTVNLVQQ 352
Query: 423 ISEQFEA-LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLR 599
+E+F+ L VK G D+ L+ S H+++ T LV+ L++ L
Sbjct: 353 QTERFKLYLQDKYIVKDISGSNGCDIPLSGLLGSS--HVVVLTAQILVNALKD-GSLQLS 409
Query: 600 PLKYLVMDE 626
+ LV DE
Sbjct: 410 SVSLLVFDE 418
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 222 ELKWKKPSKIQKEAIPVALLGKDIIG-LAETGSGKTGAFALPILQALLENPQRYFALIL 395
E +W ++ K+ + L DI+G L E + G LP LQA+L +P+R L L
Sbjct: 1555 ETRWWSKWEVYKQML---LQFGDIVGFLIEAEAANIGPQLLPQLQAILSDPERVINLKL 1610
>SB_4907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 29.1 bits (62), Expect = 3.9
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 222 ELKWKKPSKIQKEAIPVALLGKDIIG-LAETGSGKTGAFALPILQALLENPQRYFALILT 398
E +W ++ K+ + L DI G L E + G LP LQA+L +P+R L L
Sbjct: 548 ETRWWSKREVYKQ---ILLQFGDIEGFLIEAEAANIGPQLLPQLQAILSDPERVINLKL- 603
Query: 399 PTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 536
+ + E F + + + VAQA P++
Sbjct: 604 -ELAITIDVGEHFVEATYFLEADAPLCYEKLHAVAQACQAPHFPNV 648
>SB_5528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 36 VFPKTMLIYRKCL-QXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFK 182
V P+ + I R Q RKA + A Q EVE+T + ++ EDD+ +K
Sbjct: 26 VIPEALHIERSIAGQKRKAAQIAEEQ-EEVEKTEIDAEEDEKEDDRYWYK 74
>SB_55052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 141 NVTEDTEDDKITFKDLGVVDVLCEACEELKWK-KPSKIQKEAIPVALLG 284
N T +TE++ I F D + D+L + C E K P K++ + V LG
Sbjct: 73 NGTGETEEEAIAFHDAALKDLL-DRCREHNLKLNPKKLKFKLERVTFLG 120
>SB_55088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 36 VFPKTMLIYRKCL-QXRKAMESATNQXSEVEQTPTENVTEDTEDDKITFK 182
+ P+ + I R Q RKA + A Q EVE+T + ++ EDD+ +K
Sbjct: 26 LIPEALHIERSIAGQKRKAAQMADEQ-EEVEKTEIDAEEDEKEDDRYWYK 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,066,275
Number of Sequences: 59808
Number of extensions: 531605
Number of successful extensions: 1693
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -