Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P20
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   6.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 656  KNMLYNFKYLIWISKTYTTGE 718
            KN+  N KY  W++   T GE
Sbjct: 1270 KNLDSNLKYEFWVTAATTIGE 1290


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 194 VALFHRHSCRLNQNQKL 144
           VA+F R  C +N+N K+
Sbjct: 201 VAMFSRKPCSINENLKM 217


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 194 VALFHRHSCRLNQNQKL 144
           VA+F R  C +N+N K+
Sbjct: 201 VAMFSRKPCSINENLKM 217


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -2

Query: 672 LYSIFFL*AFSSSVCSDANNGTLIAAGM 589
           ++ +F+L   +S +C++AN   ++  G+
Sbjct: 203 VFDLFYLSKRASDLCNEANKTKILLVGL 230


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 659 NMLYNFKYLIWISKTY--TTGESSXVLF 736
           N LY+   L+WI+ T+    G+S  V++
Sbjct: 248 NSLYSLHLLLWITVTFILLVGDSYIVMY 275


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 489 DSFVSNSLICATLGSFFLLV 430
           D ++   L+C  LG F L++
Sbjct: 100 DQYLLEQLVCEQLGGFLLIL 119


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 255 SSCLIPWKSLSSGLRPSKSACSS 187
           S C+  W+S  S LRP  S  S+
Sbjct: 225 SICIEIWQSSESSLRPRSSQKSA 247


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 300 ASPPRSTFDFRNSCLSSCLIPWKSLSSGLRPSKSACSSFSP 178
           +SP  ++  + NS  SS   P    S  L   +S CSS  P
Sbjct: 201 SSPTIASATYTNSANSSIWSPASIDSFTLEQHRSWCSSSQP 241


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 615 YLHHYRLNLRKLIGKICYTTLNTLFGSVKLTLLESHXK 728
           Y HH   +LR   G   +      +  V  ++L SH K
Sbjct: 242 YKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMK 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,458
Number of Sequences: 336
Number of extensions: 2527
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)