Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P20
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58758-10|AAB93435.1|  349|Caenorhabditis elegans Hypothetical p...    54   8e-08
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ...    29   3.5  

>U58758-10|AAB93435.1|  349|Caenorhabditis elegans Hypothetical
           protein ZK1127.4 protein.
          Length = 349

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
 Frame = +2

Query: 200 DFEGRNPEDSDFHGIKQLLRQLFLKSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXX 379
           DFE   P + D  GI  +L Q FL++++DL  +++ II++   G V+ Q           
Sbjct: 71  DFEAYPPSEDDRDGIVNMLTQTFLRTDIDLKAMSEGIIAKAPHGVVLTQA------YDDE 124

Query: 380 XXXXXXXVFGVTTVVNITKRKNEPSVAQIRELLTKL---SQENADPRTKELIKYILADDS 550
                   +G+ T V +   K++ +   I++L T +   +++ A     + I+ I     
Sbjct: 125 ETEEDYMAYGLCTTVPLNDNKDD-APKFIKDLFTYVLNRAKKGAPTEIYKKIEEIQVSGD 183

Query: 551 QHTGLVINERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISK 700
             + L +NER+LN P  +   +F S++ +L     K     +K +I+I K
Sbjct: 184 GKSALFVNERLLNFPTIVVPQIFGSIREDLSGFETK-----YKTIIYIQK 228


>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 569 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTY 706
           INER L +     V +F     +L+  ++   L  FK +IW+ K Y
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIY 170


>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 569 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTY 706
           INER L +     V +F     +L+  ++   L  FK +IW+ K Y
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIY 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,769,741
Number of Sequences: 27780
Number of extensions: 240022
Number of successful extensions: 655
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)