Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P15
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 884 FILLDCYLKFYCI*IIXG*LWY 819
           FI+   +L FYC+ II   ++Y
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYY 240


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = +2

Query: 344 GN-YGCKHQW 370
           GN YGC+H+W
Sbjct: 374 GNGYGCEHRW 383


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 660  ILINCVYFCMC 628
            +L+NCVY  +C
Sbjct: 1127 VLLNCVYLFLC 1137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,087
Number of Sequences: 336
Number of extensions: 4290
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)