Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P15
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58748-4|AAB52967.1|  522|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z68299-6|CAA92610.2|  412|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>U58748-4|AAB52967.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK180.3a protein.
          Length = 522

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +1

Query: 196 PLYRSQRFRHSIPKFLTLLFRSPLLITL 279
           PL +++  R S+PKF+ LL+ SP++ T+
Sbjct: 58  PLRKAEIIRGSLPKFINLLWLSPIISTV 85


>Z68299-6|CAA92610.2|  412|Caenorhabditis elegans Hypothetical
           protein T04B2.3a protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 174 GFPSDMWPSIQIPTIPPFDPKIPNFAFSFP-SPDNIKKTKPQP 299
           GFP+  + +  IP    FDP   +F+   P SP +I    P P
Sbjct: 59  GFPATDFDNQNIPKATQFDPNYYDFSHQNPFSPQSISMNTPAP 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,535,014
Number of Sequences: 27780
Number of extensions: 380255
Number of successful extensions: 804
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)