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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P14
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0848 - 28677545-28677635,28677760-28677887,28678020-286781...    37   0.019
06_01_1085 - 8886868-8887556,8887629-8888574                           35   0.058
01_05_0772 + 25056973-25057285,25057678-25058006,25058113-250583...    35   0.077
12_01_0259 - 1905291-1905393,1905536-1905672,1905787-1905893,190...    33   0.18 
11_01_0261 - 1989988-1990090,1990232-1990368,1990483-1990589,199...    33   0.18 
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437...    33   0.18 
07_03_0391 - 17587144-17587323,17587460-17587566,17587664-175877...    33   0.24 
01_06_0401 + 29038306-29038529,29038815-29038967,29039489-290402...    33   0.24 
11_03_0126 + 10371536-10371596,10372467-10372544,10373968-103741...    31   0.72 
06_01_0640 - 4644576-4645007,4645090-4646163,4646196-4646258           31   0.72 
06_01_0639 + 4641665-4642846,4642929-4643360                           31   0.95 
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57...    31   1.3  
01_05_0776 + 25072541-25073080,25073174-25073418,25073558-250739...    31   1.3  
06_01_0622 - 4527710-4528266,4528302-4528303,4535590-4535777           30   2.2  
01_06_1046 + 34087867-34089402                                         30   2.2  
11_04_0254 - 15377689-15378357,15378807-15379241,15380326-153803...    29   5.1  
09_04_0493 - 18046553-18046990,18047061-18047180,18047290-180474...    29   5.1  
02_04_0468 - 23172561-23174201                                         29   5.1  
01_05_0788 + 25223373-25223405,25224285-25224373,25224496-252246...    29   5.1  
07_03_1404 + 26329179-26329455,26329602-26330878                       28   6.7  
01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131...    28   6.7  
01_01_0594 + 4420381-4421898                                           28   6.7  
10_08_0271 - 16382655-16384451                                         28   8.8  
09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23...    28   8.8  
05_04_0361 - 20648383-20649942                                         28   8.8  
01_01_0896 + 7060431-7061390,7063562-7064191                           28   8.8  

>04_04_0848 -
           28677545-28677635,28677760-28677887,28678020-28678126,
           28678242-28678320,28678426-28678515,28678603-28678854,
           28680351-28680497,28680711-28681035,28681177-28681406
          Length = 482

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 23/76 (30%), Positives = 34/76 (44%)
 Frame = +3

Query: 207 PHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKS 386
           P     PIIG  F  F A    ++  Y   R ++ GP+F   L G+  ++ + DP   + 
Sbjct: 44  PGSMGFPIIGETFQFFRASPSIDMPSYYKQRLERYGPLFKTSLVGRPVIISL-DPEVNRF 102

Query: 387 LFLNLEGKYPAHILPE 434
           +F   EGK      PE
Sbjct: 103 IF-QQEGKLFQSWYPE 117


>06_01_1085 - 8886868-8887556,8887629-8888574
          Length = 544

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 36/137 (26%), Positives = 62/137 (45%)
 Frame = +3

Query: 219 SLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLN 398
           +LP+IG   +L   G G++ H+ +    ++ GP+F  RL G  + + +S  +  +++  +
Sbjct: 48  ALPVIG---NLHQLGRGRH-HRALRELARRHGPLFQLRL-GSVRALVVSSASMAEAVLRH 102

Query: 399 LEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLREDSDVWLRAPIR 578
            +  +     P+       LYG +   F   GE W   RR+   HLL        RA   
Sbjct: 103 QDHVFCGR--PQQHTARGTLYGCRDVAFSPYGERWRRLRRVAVVHLLSARRVDSFRALRE 160

Query: 579 TAVFHFICNWKLRAQSG 629
             V  F+   ++RA SG
Sbjct: 161 EEVASFVN--RIRAASG 175


>01_05_0772 +
           25056973-25057285,25057678-25058006,25058113-25058360,
           25058481-25059396
          Length = 601

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
 Frame = +3

Query: 339 GKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRR 518
           G T  V I++P  +K +  N  G +    L        KL     GL   +GE W  +RR
Sbjct: 149 GTTPRVVIAEPELVKDILSNKFGHFEKFTLKS----LGKLIAL--GLASYEGEKWARHRR 202

Query: 519 IMNKHLLREDSDVWLRAPIRTAVFHFICNW--KLRAQSGNFSPNLESEFYRFSTDVI 683
           I+N     E     L A   T     I  W  KL    G F  ++  EF   + DVI
Sbjct: 203 ILNPAFHLEKLKHMLPA-FSTCCSEMIDRWDSKLAGSDGPFELDIWQEFQNLTGDVI 258


>12_01_0259 -
           1905291-1905393,1905536-1905672,1905787-1905893,
           1906012-1906090,1906256-1906342,1906987-1907265,
           1907401-1908114
          Length = 501

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +3

Query: 207 PHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKS 386
           P    LP+IG    L SA    N   +ID R  + G +F   + G+ + VF +DP     
Sbjct: 44  PGSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGE-RTVFSADPA-FNR 101

Query: 387 LFLNLEGK 410
           L L  EG+
Sbjct: 102 LLLAAEGR 109


>11_01_0261 -
           1989988-1990090,1990232-1990368,1990483-1990589,
           1990708-1990786,1990952-1991038,1991688-1991966,
           1992109-1992822
          Length = 501

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +3

Query: 207 PHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKS 386
           P    LP+IG    L SA    N   +ID R  + G +F   + G+ + VF +DP     
Sbjct: 44  PGSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGE-RTVFSADPA-FNR 101

Query: 387 LFLNLEGK 410
           L L  EG+
Sbjct: 102 LLLAAEGR 109


>01_05_0769 -
           25042022-25042447,25042856-25043234,25043714-25043763,
           25044222-25044442,25045085-25045385
          Length = 458

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +3

Query: 339 GKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRR 518
           G T  V ISDP  ++ +  N  G Y     P+P  L  KL  S  G+   +GE W  +RR
Sbjct: 109 GPTPRVMISDPESIREVMSNKFGHYGK---PKPTRL-GKLLAS--GVVSYEGEKWAKHRR 162

Query: 519 IMNKHLLRE----DSDVWLRAPIRTAVFHFI 599
           I+N     E       V   AP+R     F+
Sbjct: 163 ILNPAFHHEKIKLPKTVVKNAPLRIVKLKFL 193


>07_03_0391 -
           17587144-17587323,17587460-17587566,17587664-17587742,
           17587850-17587939,17588337-17588588,17588748-17588894,
           17589071-17589246,17589303-17589394,17589582-17589673
          Length = 404

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 225 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 404
           P++G  F  F A    ++  Y   R ++ GP+F   L G+  LV   DP   + +F   E
Sbjct: 4   PVVGETFQFFRASPSVDMPSYYKQRLERYGPLFKTSLVGQ-PLVVSLDPEVNRFIFQQEE 62

Query: 405 GKYPAHI 425
              P H+
Sbjct: 63  ---PHHV 66


>01_06_0401 +
           29038306-29038529,29038815-29038967,29039489-29040296,
           29040393-29040488,29040982-29041251
          Length = 516

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 28/116 (24%), Positives = 53/116 (45%)
 Frame = +3

Query: 177 HKSLRTIDEMPHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLV 356
           ++  R +  +P    LP+IG    L  A  G ++   +  +H   GP+F   + G+  L+
Sbjct: 31  YEPYRKVWHVPGPVPLPLIGHLHLL--AMHGPDVFSVLARKH---GPVFRFHM-GRQPLI 84

Query: 357 FISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIM 524
            ++D    K + +      P   +P P +    ++  K+GLFF+ G  W   R ++
Sbjct: 85  IVADAELCKEVGVKKFKSIPNRSMPSP-IANSPIH--KKGLFFIRGPRWTSMRNMI 137


>11_03_0126 +
           10371536-10371596,10372467-10372544,10373968-10374127,
           10374286-10374610,10374708-10374860,10374985-10375236,
           10375356-10375445,10375543-10375621,10375712-10375818,
           10375921-10376048,10376329-10376419
          Length = 507

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 21/76 (27%), Positives = 30/76 (39%)
 Frame = +3

Query: 207 PHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKS 386
           P     PI+G  F  F      ++  Y   R ++ GPIF   + G+  +V   DP  +  
Sbjct: 67  PGSMGFPIVGETFQFFRTSPSIDMPIYYKRRLERYGPIFKTNIGGQ-HVVISLDP-EVNQ 124

Query: 387 LFLNLEGKYPAHILPE 434
                EGK      PE
Sbjct: 125 FIFQQEGKLFQSWFPE 140


>06_01_0640 - 4644576-4645007,4645090-4646163,4646196-4646258
          Length = 522

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 336 TGKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINR 515
           +G T  + + D   +K +  +  G Y     PEP +L   L G+  GL F+ G+DW  +R
Sbjct: 95  SGATPALCVGDYAMVKQILSDRTGLY-GKPEPEPSIL--ALIGN--GLIFIGGDDWARHR 149

Query: 516 RIMN 527
           R+++
Sbjct: 150 RVVH 153


>06_01_0639 + 4641665-4642846,4642929-4643360
          Length = 537

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +3

Query: 336 TGKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINR 515
           TG    + + D    K +  +  G Y     P+P      L+G+  GL F++G+DW  +R
Sbjct: 107 TGPFPALCVGDYAMAKEILADRTGLYAK---PDPGASILALFGN--GLAFVNGDDWARHR 161

Query: 516 RIMN 527
           R+++
Sbjct: 162 RVVH 165


>02_01_0084 -
           573638-574305,574705-574900,574997-577246,578053-579174,
           579266-579370,579975-580028,580244-580344,580454-581423,
           582030-582203,582341-582643,582719-582856,582993-583247,
           584230-584370,585008-585289,585395-585540,585627-585690,
           585723-585799,586285-586301,587728-587867,587972-588029,
           588121-588218,588727-588776,589260-589743
          Length = 2630

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
 Frame = +3

Query: 120 IRSAVRSRNSNRCSMSTKPHKS--LRTIDEMPH---KKSLPIIGTKFDLFSAGGGKNLHK 284
           +RS++ + ++   ++ T  H S  L  +D+M +   KKSL +I   F    AGG K  + 
Sbjct: 763 LRSSLSNNSNVTENIDTVVHASGKLLVLDKMLNEIKKKSLRVI-LLFQSDRAGGNKMGNI 821

Query: 285 YIDMRHKQLGPIFYERL 335
             D+ H + GP  YER+
Sbjct: 822 LEDLMHHRFGPESYERV 838


>01_05_0776 +
           25072541-25073080,25073174-25073418,25073558-25073942,
           25074058-25074483
          Length = 531

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = +3

Query: 339 GKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRR 518
           G    V I+DP  ++ +  N  G +    LP       KL     GL   DGE W+ +RR
Sbjct: 115 GPIPSVTITDPAQVRDVLSNKLGHFEKPKLPA----LTKLLAD--GLTSHDGEKWVKHRR 168

Query: 519 IMN 527
           IMN
Sbjct: 169 IMN 171


>06_01_0622 - 4527710-4528266,4528302-4528303,4535590-4535777
          Length = 248

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 429 PEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMN 527
           PEP   +  L G+  GL F++G+DW+ +RR+++
Sbjct: 16  PEPGPSFLALIGN--GLAFVNGDDWVRHRRVVH 46


>01_06_1046 + 34087867-34089402
          Length = 511

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 5/168 (2%)
 Frame = +3

Query: 216 KSLPIIGTKFDLFSAGGGKNLHKYID-----MRHKQLGPIFYERLTGKTKLVFISDPTHM 380
           KS P++GT   +      KN H+++      M+      + Y+ L G T  V  ++P ++
Sbjct: 42  KSYPVVGTLPHII-----KNKHRFLKWSTSIMKCSPTNTMSYKAL-GLTGGVITANPANV 95

Query: 381 KSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLREDSDVW 560
           + +       YP   L     + E   G   G+F  DGE WL  R+  +    +     +
Sbjct: 96  EHILKTNFDNYPKGKLTVS--MLEDFLG--HGIFNSDGEQWLWQRKAASYEFNKRSLRNF 151

Query: 561 LRAPIRTAVFHFICNWKLRAQSGNFSPNLESEFYRFSTDVILAVLQGE 704
           +   +R  +   +     +A     + +L+    RF+ D I  V  GE
Sbjct: 152 VVDTVRFEIVKRLLPLLEQAGLDGRTLDLQDVLERFAFDNICLVAFGE 199


>11_04_0254 -
           15377689-15378357,15378807-15379241,15380326-15380370,
           15380675-15381145
          Length = 539

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 459 YGSKRGLFFMDGEDWLINRRIMNKHLL--REDSDVWL 563
           YGS+   F   GEDW   R+++N HLL   +   +WL
Sbjct: 116 YGSRDIGFAPYGEDWRQARKLVNTHLLSVNKVQSLWL 152


>09_04_0493 -
           18046553-18046990,18047061-18047180,18047290-18047478,
           18047596-18047739,18048673-18048900,18049659-18049838,
           18050304-18050399,18051096-18051262,18051356-18051773,
           18052335-18052517,18053846-18053953,18054053-18054246,
           18054503-18054662
          Length = 874

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 156 CSMSTKPHKSLRTIDEMPHKKSLPIIGTKFDLFSAGGGKNL 278
           C M  +P +++R + EM H    P + T   LFS  G  N+
Sbjct: 499 CDMMNEPERAVRVLAEMRHLNLKPNLRTYELLFSLFGNVNV 539


>02_04_0468 - 23172561-23174201
          Length = 546

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 34/132 (25%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
 Frame = +3

Query: 312 GPIFYERLT--GKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFF 485
           G +F  R T  G +  V  S P +++ +     G YP    P     + +L G   G+F 
Sbjct: 83  GGVFPYRGTWGGGSSGVITSAPANVEHVLRANFGNYPKG--PYYRERFVELLGG--GIFN 138

Query: 486 MDGEDWLINRRIMNKHLLREDSDVWLRAPIRTAVFHFICNWKLRAQSGNFSPNLESEFYR 665
            DGE W   RR     +       +    I   V+  +     R   G  + +L+    R
Sbjct: 139 ADGEAWRAQRRAATAEMHSSRFVEFSVRSIEQLVYGRLVPLAERLSGGGAAVDLQEVLLR 198

Query: 666 FSTDVILAVLQG 701
           F+ D I AV  G
Sbjct: 199 FTFDNICAVAFG 210


>01_05_0788 +
           25223373-25223405,25224285-25224373,25224496-25224624,
           25224710-25224766,25224844-25224916,25225509-25225667,
           25226755-25226904,25227013-25227268,25227358-25227479,
           25227531-25227599,25227653-25227739,25227842-25227930,
           25228168-25228224,25229162-25229258,25229348-25229506
          Length = 541

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 228 LVMISYVASHLWYVEIYEA-*LTLNIDYCYDS*QPI*W 118
           ++ IS VA +LWY  IY+   +T N  + Y S  PI W
Sbjct: 402 IISISLVAGYLWYEYIYKLDKITYNKYHPYTSWIPITW 439


>07_03_1404 + 26329179-26329455,26329602-26330878
          Length = 517

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/63 (22%), Positives = 35/63 (55%)
 Frame = +3

Query: 339 GKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRR 518
           G    + ++D + ++ +  +  G YP ++   P+  + +L G  +GL   DG++W  +R+
Sbjct: 101 GARPTICLADVSMVRQVLSDRTGMYPKNV-SNPY--FARLLG--KGLVLTDGDEWKRHRK 155

Query: 519 IMN 527
           +++
Sbjct: 156 VVH 158


>01_05_0777 +
           25110356-25110662,25112569-25112789,25112880-25113127,
           25113274-25113664,25113751-25114155,25115260-25115366,
           25115833-25116170,25116206-25116486,25116645-25116889,
           25116998-25117382,25117459-25117884
          Length = 1117

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 354 VFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMN 527
           V +SDP   + +  N  G++        WV  + L     GL    GE W+ +RRIMN
Sbjct: 705 VIVSDPKLFREILANKNGRFGKQ-KSILWV--QNLLAD--GLTSHQGEKWVAHRRIMN 757


>01_01_0594 + 4420381-4421898
          Length = 505

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 351 LVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNK 530
           ++  +DP ++  +F    G YP     E   +++ L G   G+F  DGE W   RR    
Sbjct: 85  VLITADPANVAHMFTANFGNYPKG--EEFAAMFDVLGG---GIFNADGESWSFQRR--KA 137

Query: 531 HLLREDS 551
           H L  D+
Sbjct: 138 HALLSDA 144


>10_08_0271 - 16382655-16384451
          Length = 598

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 204 SHLWYVEIYEA*LTLNIDYCYDS 136
           S LW++ +  A +TL + +CYDS
Sbjct: 16  SRLWFMVVLSATVTLLVRHCYDS 38


>09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-236292,
            236508-236636,237516-237589,237836-237968,239366-239584,
            239671-239756,239843-241107,241304-241640,242548-242862,
            243614-243697,243776-243883,243981-244079
          Length = 1175

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 49   LLKWLLISGSSLI*-KCIVSRR--CLPLDRLLGVVTVIDVQCQLSL 177
            L  W L SG  L   +C  S R  C+ +D   GVV V D  CQL L
Sbjct: 1110 LYAWELSSGRKLAGTQCFNSGRVSCVAVDAKSGVVAVADDGCQLVL 1155


>05_04_0361 - 20648383-20649942
          Length = 519

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = +3

Query: 459 YGSKRGLFFMDGEDWLINRRIMNKHLLREDSDVWLRAPIRTAVFHFICNWKLRAQSGNFS 638
           YG K  +F   GE W   RR+ ++H+L   +      P+R      + N  +R ++   +
Sbjct: 117 YGFKDLVFAPYGEHWRHARRLCSEHVL-SAARSHRYGPMREQEVALLVN-AIRTEAAAAA 174

Query: 639 PNLESEFYRFSTDVILAVLQG 701
            ++    Y F+  VI   + G
Sbjct: 175 VDVSKALYAFTNAVICRAVSG 195


>01_01_0896 + 7060431-7061390,7063562-7064191
          Length = 529

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/76 (27%), Positives = 33/76 (43%)
 Frame = +3

Query: 312 GPIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMD 491
           GP+   RL G+  +V +S     + +    + ++ +   P   +    LYG +   F   
Sbjct: 77  GPVLLLRL-GRVPVVVVSSAAAAEEVMRTRDLEFASR--PRVAMAERLLYGGRDVAFAPY 133

Query: 492 GEDWLINRRIMNKHLL 539
           GE W   RRI   HLL
Sbjct: 134 GEYWRQTRRICVVHLL 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,360,011
Number of Sequences: 37544
Number of extensions: 394197
Number of successful extensions: 826
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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