Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_P14
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12080| Best HMM Match : p450 (HMM E-Value=0) 65 5e-11
SB_5584| Best HMM Match : p450 (HMM E-Value=1) 63 2e-10
SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_25597| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_8320| Best HMM Match : p450 (HMM E-Value=0) 56 3e-08
SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19) 53 3e-07
SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.060
SB_34557| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_26726| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_38839| Best HMM Match : HicB (HMM E-Value=5.7) 30 1.7
SB_36654| Best HMM Match : p450 (HMM E-Value=1.3e-27) 29 3.0
SB_57426| Best HMM Match : Arteri_nucleo (HMM E-Value=7.6) 29 3.0
SB_1738| Best HMM Match : p450 (HMM E-Value=0) 29 5.2
SB_29796| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 28 9.0
>SB_12080| Best HMM Match : p450 (HMM E-Value=0)
Length = 522
Score = 65.3 bits (152), Expect = 5e-11
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Frame = +3
Query: 216 KSLPIIGTKFDL--FSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSL 389
K +P G K +L F G +++H + GPI+ E+ G K F++DP ++ +
Sbjct: 56 KEIPGPGWKGNLSYFGKNGIEHMHLRQQKWRQNHGPIYREQF-GPYKTAFVADPKLVREV 114
Query: 390 FLNLEGKYPAHILP-EPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLREDSDVWLR 566
F N EGKYP E W+ Y++ G+F ++GE+WL R ++NK +L+
Sbjct: 115 FQN-EGKYPQREPQIELWMDYKEKRKQAHGVFSLNGEEWLKARSVLNKKMLKPKVVHGYA 173
Query: 567 APIRTAVFHFI--CNWKLRAQSGNFSPNLESEFYRFSTDVILAVL 695
+ V FI N S PNL++ +++S + I VL
Sbjct: 174 PELSNVVDDFIGRVNELRSTTSDKTVPNLQNVLFKWSMESIGTVL 218
>SB_5584| Best HMM Match : p450 (HMM E-Value=1)
Length = 286
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Frame = +3
Query: 216 KSLPIIGTKFDL--FSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSL 389
K +P G K +L F G +++H + GPI+ E+ G K F++DP ++ +
Sbjct: 23 KEIPGPGWKGNLSYFGKNGMEHMHLRQQEWRQNHGPIYREQF-GPYKTAFVADPKLVREV 81
Query: 390 FLNLEGKYPAHILP-EPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLREDSDVWLR 566
F N EGKYP E W+ Y++ G+F GE+W R ++NK +L+
Sbjct: 82 FRN-EGKYPQREPQIELWMDYKEKRKQAHGVFSSLGEEWFKARSVLNKKMLKPKVVDGYA 140
Query: 567 APIRTAVFHFI--CNWKLRAQSGNFSPNLESEFYRFSTD 677
+ V FI N S PNL++E +++ST+
Sbjct: 141 PELSNVVDDFIGRVNELRSTTSDKTVPNLQNELFKWSTE 179
>SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 62.9 bits (146), Expect = 3e-10
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +3
Query: 186 LRTIDEMPHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFIS 365
+R E+P K LP IG+ D GG LH K+ GPI+ + L G T V IS
Sbjct: 56 IRPFQEIPGPKGLPWIGSIHDYILKGGFSKLHLLRQSYFKRYGPIYKDHLMG-TTTVNIS 114
Query: 366 DPTHMKSLFLNLEGKYPAHILP-EPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLR 542
DP + + N EGKYP + + + + +G+ + +G++WL R K +LR
Sbjct: 115 DPEEITKVIRN-EGKYPERPFHFDAIIKHREKTTQPQGVVYAEGQEWLRLRTAFGKKMLR 173
>SB_25597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 61.3 bits (142), Expect = 8e-10
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Frame = +3
Query: 87 LKMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHKKSLPIIGTKFDLFSAGG 266
L + R+PS S R+ SN +T + ++TI EMP SLP+ G+ L
Sbjct: 17 LGLFRYPS--SCRAIYHRHQSNSTYSATSSGERVKTIAEMPGLPSLPVFGSAPFLALNRK 74
Query: 267 GKNLHKYI-DMRHKQL---GPIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYPAHILPE 434
G+ L K++ D + + G IF + G K++ ++DP ++ N E KYP
Sbjct: 75 GRPLGKFVLDKQFTDVETYGKIFKFDVPGGFKIISVADPDTAMAILRN-EPKYPKRFDIP 133
Query: 435 PWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLR 542
Y + G+FF +G DW R +++K +LR
Sbjct: 134 LIDFYRETRKKIPGVFFAEGSDWHKYRSVISKRILR 169
>SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 758
Score = 59.3 bits (137), Expect = 3e-09
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 186 LRTIDEMPHKKSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFIS 365
+R E+P K LP IG+ GG LH K+ GPI+ + L G T V IS
Sbjct: 3 IRPFQEIPGPKGLPWIGSIHGYILKGGVSKLHLLHQSYFKKYGPIYKDHLMG-TTTVSIS 61
Query: 366 DPTHMKSLFLNLEGKYPAHILP-EPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLR 542
DP + +F N EGKYP + + G+ + +G++WL R K +LR
Sbjct: 62 DPEDIAKVFRN-EGKYPERTADLGALQKHREKTNQPPGVAYAEGQEWLRLRTAFGKKMLR 120
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 58.0 bits (134), Expect = 7e-09
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Frame = +3
Query: 87 LKMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHKKSLPIIGTKFDLFSAGG 266
L + R+P+ S R+ +N +T + ++TI EMP SLP+ G+ L
Sbjct: 563 LGLFRYPA--SCRAIYHRHQTNSTYSATPSGERVKTIAEMPGLPSLPVFGSAPFLALNRK 620
Query: 267 GKNLHKYI-DMRHKQL---GPIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYPAHILPE 434
G+ L ++I D + + G IF + G K++ ++DP ++ N E KYP
Sbjct: 621 GRPLGRFILDKQFTDVETYGKIFKLDVPGGFKIISVADPDTAMAILRN-EPKYPKRFDSP 679
Query: 435 PWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLR 542
Y G+FF +G DW R +++K +LR
Sbjct: 680 LLDFYRNTRKKIPGVFFAEGPDWHKYRSVISKRILR 715
>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
Length = 1207
Score = 56.0 bits (129), Expect = 3e-08
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Frame = +3
Query: 138 SRNSNRC----SMSTKPHKSLRTIDEMPHKKSLPIIGTKFDLF----SAGGGKNLHKYID 293
SR + RC + +T +++ D++P LP++GT + S GK +
Sbjct: 703 SRAAFRCLTTVNNATNKPETILAFDQIPGPPCLPLLGTSWQTLLETRSTTLGKAIFNLEK 762
Query: 294 MRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKR 473
++ G I + L G +V ISDP ++ + L E K+P L Y +L
Sbjct: 763 KNFEKYGKILRQELPGVGSVVSISDPDDVQ-MVLRSESKFPKRSLLPLIDQYRQLRQVPP 821
Query: 474 GLFFMDGEDWLINRRIMNKHLLREDSDVWLRAPIRTAVFH--FICNWKLRAQSGNFSP-- 641
GL F GE+W +R +++K +LR +V P A+ + I KLR + +
Sbjct: 822 GLAFAVGEEWYKHRTVLSKKMLR-PPEVAAYCPTFDAITNEFLIKIHKLRGPANSPKEYE 880
Query: 642 --NLESEFYRFSTDVILAVL 695
LE+E +R+S + I VL
Sbjct: 881 VHGLENELFRWSFENISTVL 900
>SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19)
Length = 461
Score = 52.8 bits (121), Expect = 3e-07
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +3
Query: 180 KSLRTIDEMPHKKSLPIIGTKFDLFSAGGG-KNLHKYIDMRHKQLGPIFYERLTGKTKLV 356
K +R +E+P +LP +G+ S G K + + + GPI+ E L G+T V
Sbjct: 39 KDVRPFEEIPGPIALPYVGSVHRYMSEKDGFKKMFRVQKKLFDEYGPIYKENLFGRTS-V 97
Query: 357 FISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHL 536
I P + +F EGKYP+ + W Y + G G+ +G++W R+ + +
Sbjct: 98 NILYPAESEKVF-RAEGKYPSRPYVKAWKKYREDRGIHAGIAQTEGKEWKRVRQALAPKM 156
Query: 537 LR 542
+R
Sbjct: 157 MR 158
>SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 35.1 bits (77), Expect = 0.060
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +3
Query: 225 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 404
P+ G D+ AG +LH+Y+ + HK GP+ + G +V ++DPT K L +
Sbjct: 49 PVNGNLLDVKKAG---SLHEYLLLLHKTYGPV-ASFMWGTINVVSVADPTLWKELRSLFD 104
Query: 405 GKYPAHILPEPWVLYEKLYGSK 470
PE + L+E L G K
Sbjct: 105 RP------PELFKLFEPLIGKK 120
>SB_34557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +3
Query: 225 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 404
P IG ++ GG LHK + + ++ Y+ G+ + +SDP +K + L
Sbjct: 37 PYIGNLLEVGKYGG---LHK-MQLHFSKIYGRVYKLFIGRAPTIVVSDPEIIKQILLKEF 92
Query: 405 GKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDW 503
K+P ++ + + + S GLF GE W
Sbjct: 93 NKFPDR---PAFIKFGRPFNS--GLFIASGETW 120
>SB_26726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +3
Query: 225 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 404
P IG ++ GG LHK + + ++ Y+ G+ + +SDP +K + L
Sbjct: 53 PYIGNLLEVGKYGG---LHK-MQLHFSKIYGRVYKLFIGRAPTIVVSDPEIIKQILLKEF 108
Query: 405 GKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDW 503
K+P ++ + + + S GLF GE W
Sbjct: 109 NKFPDR---PAFIKFGRPFNS--GLFIASGETW 136
>SB_38839| Best HMM Match : HicB (HMM E-Value=5.7)
Length = 268
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 54 KVVTYIRILFNLKMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHKKSLPII 233
++ + +R ++ R PS+ + V ++ RC+ + +S+RT H LPI
Sbjct: 5 RIRSSLRCGYSFLRDRRPSLVAASPVVNEVSAVRCASRSHAMRSMRTRRRARHWDRLPIA 64
Query: 234 GTKFD 248
G K D
Sbjct: 65 GVKRD 69
>SB_36654| Best HMM Match : p450 (HMM E-Value=1.3e-27)
Length = 377
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 393 LNLEGKYPAHILPEPWVLYEKLYGSKRGLFFMDGEDWLINRRIMNKHLLR 542
L E KYP Y + G+FF +G DW R +++K +LR
Sbjct: 4 LRNEPKYPKRFDIPLIDFYRETRKKIPGVFFAEGSDWHKYRSVISKRILR 53
>SB_57426| Best HMM Match : Arteri_nucleo (HMM E-Value=7.6)
Length = 195
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 27 VAALCSRFIKVVTYIRILFNLKMHRFP-----SMSSIRSAVRSRNSNRCSMSTKPHKSLR 191
V CS+ + VV + +++ N +H + S SS+ +A + R S HK L+
Sbjct: 84 VGVSCSKVVLVVIFHKMVPNHTVHTYAILDKQSDSSLHAAKQERKDKETSPLVDDHKLLK 143
Query: 192 TIDEMPHKKSL 224
++ HK +L
Sbjct: 144 IMEVGIHKNAL 154
>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
Length = 484
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 225 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 404
P IG D+ GG +HK + K G + ++ G+ + +SDP +K + +
Sbjct: 37 PYIGNLLDVKKHGG---MHKMLMHYFKAYGRV-HKMFIGRAAAIVVSDPEIVKQIVIKEF 92
Query: 405 GKYP 416
K+P
Sbjct: 93 HKFP 96
>SB_29796| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 362
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 69 IRILFNLKMHRFPS-MSSIRSAVR-SRNSNRCSMSTKPHKSLRTIDEMPHKKSLPIIGTK 242
+R +F ++H PS +I R +RN N+CS + + +DE P K+ T
Sbjct: 279 LREMFCKRLHTNPSRFFNIYGEPRINRNKNKCSTRSVKILDIAILDEGPDKRKQKDDITM 338
Query: 243 FDLFSAGGGKNL 278
+ + + G +N+
Sbjct: 339 YSMTTVTGVENI 350
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,698,144
Number of Sequences: 59808
Number of extensions: 469485
Number of successful extensions: 1079
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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