Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P13
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.89 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 197 VTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RD 313
           V +VS   ++ R+  PL+KLC+  + +     HR H  D
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSD 174


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 220 WVWTDHRNPAVYDHNVFXPWAACLSLDFLYCDT 122
           W   D++ P V+D   F    AC+S+ +    T
Sbjct: 153 WFPFDYKQPVVFDLVYFILAFACISIAYTNVST 185


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -1

Query: 362 IICPFLFLSPPSSKCLHLFNATCDLTLQSAHSRRSTI 252
           ++C  L L PP+ +   L N    +     H R  T+
Sbjct: 334 VVCESLRLWPPAPQTDRLCNKNFVIEASKPHERTFTV 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,153
Number of Sequences: 336
Number of extensions: 1768
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)