Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P07
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 16/81 (19%)
 Frame = +3

Query: 150 IHIYKTS*TKMDVDGASVP---GEID-------QNLLLQFSCMNTT------DREELIKQ 281
           + +Y T  TK+D DG S+    G +D       Q L +  +C+N        D+ + I +
Sbjct: 51  VSVYLT--TKIDNDGESISLASGWLDLYLGITIQTLGIISNCINAKQITIFFDKIQRIDK 108

Query: 282 MQKLLGPSLNYNTASFFLDMS 344
              LLG S+NY   S F++++
Sbjct: 109 QFGLLGYSINYRRISIFVNLA 129


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 567 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTD 668
           L  L +GH++ +TL++   S  G   +  HL  D
Sbjct: 420 LASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLD 453


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 460 RAPGSKLPVGPSD 422
           RAPG+K  VGP D
Sbjct: 26  RAPGAKKKVGPID 38


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 460 RAPGSKLPVGPSD 422
           RAPG+K  VGP D
Sbjct: 26  RAPGAKKKVGPID 38


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 444 LEPGARFDQNWSIVNTGTEQW 506
           + PG  F  ++++ N+GT  W
Sbjct: 157 IHPGMTFRYHFNVHNSGTHFW 177


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 544 GSPPACINLQQPGHCSVPVLTILQ 473
           G PPA I LQ PG    P +T  Q
Sbjct: 183 GVPPAGIPLQNPGLNLNPPVTQTQ 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,325
Number of Sequences: 336
Number of extensions: 3557
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)