Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_P01
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.12 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 456 VVKSFEPNDG*RQ-GGKVQSQICRSF 382
           +VKSF+  D   Q GGKV++ IC++F
Sbjct: 504 LVKSFDAIDSKLQTGGKVETSICKNF 529


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 539 ARHWRGTKQERNRRSEDPNFEFGKGTFKREERQRSCK 649
           A+HW G  Q++ R  ED   +F + T+   +RQR  +
Sbjct: 192 AKHWTGIFQKKWRGYEDFRRDFLR-TYWSAKRQRDIR 227


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 455 TGYIVSSV*GKLPPSSECYHYC*NFVREARHWRGTKQERNR 577
           TGY + S     PPS +    C +  R +   +G K  + R
Sbjct: 85  TGYHLGSYAANCPPSPKDDEKCLSLERPSGGGKGKKMRKPR 125


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = -2

Query: 339 RDAGGLTVQYLNIFASHELHLADIILARQ*ESENK*MPARLCKLEI 202
           RD G  T+  LN+F S       +   RQ    +  +    C L+I
Sbjct: 3   RDLGSTTMMVLNLFFSQMYFTKKLEQMRQVHEVDNQLKQMGCDLDI 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,155
Number of Sequences: 336
Number of extensions: 2951
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)