Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_O21
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U55367-2|AAA97988.2|  356|Caenorhabditis elegans G protein, alph...    27   8.7  
AY008132-1|AAG32085.1|  356|Caenorhabditis elegans heterotrimeri...    27   8.7  

>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 420 PSPADQ*REVPPEEAPDPAGPLPGTDGGG 334
           P+PA +   + PE AP PA P P +D GG
Sbjct: 191 PAPAPE-AALAPETAPAPA-PAPASDAGG 217


>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical protein
            F20B10.1 protein.
          Length = 1180

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +3

Query: 174  GPLMLSFIILCL-SVICHXXXXXXXXXXLTATPEYILPCTRSDPQLDNCIKNSFNH 338
            G L LS  ILC+ S+IC+             T E   P    +P + N   N+ N+
Sbjct: 1114 GILALSLFILCMSSLICYMRSRPEGVYKTNETGENCSPSRSEEPLVHNTTSNNNNN 1169


>U55367-2|AAA97988.2|  356|Caenorhabditis elegans G protein, alpha
           subunit protein 10 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 401 KERFHRRKLQIRQALCQVRTEVVERVLDAIIEL 303
           K   H RK+ I Q LCQ    ++E V + I+E+
Sbjct: 65  KTELHERKVLIIQNLCQFSEMLLEYVREYILEM 97


>AY008132-1|AAG32085.1|  356|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 401 KERFHRRKLQIRQALCQVRTEVVERVLDAIIEL 303
           K   H RK+ I Q LCQ    ++E V + I+E+
Sbjct: 65  KTELHERKVLIIQNLCQFSEMLLEYVREYILEM 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,636,077
Number of Sequences: 27780
Number of extensions: 273579
Number of successful extensions: 706
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)