Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O18
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800 33 0.14
02_02_0310 - 8842286-8843314 32 0.43
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 30 1.3
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 30 1.7
08_01_1038 + 10540185-10540709 29 3.0
03_04_0035 - 16685674-16686376,16686594-16686640 29 3.0
02_02_0125 - 7026037-7027377 29 3.0
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428... 29 4.0
02_05_0688 - 30918499-30919602 29 4.0
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 28 5.3
02_04_0260 - 21350060-21350269,21350544-21350604,21350834-213509... 28 5.3
01_06_0288 - 28228673-28228744,28228866-28229071,28229316-282295... 28 5.3
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 7.0
06_03_1269 + 28865236-28865819,28866124-28866754 28 7.0
11_04_0385 - 17022367-17022597,17022738-17022797,17022912-170229... 27 9.2
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 27 9.2
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790... 27 9.2
02_04_0346 - 22183145-22183264,22183877-22183966,22184140-221842... 27 9.2
>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
Length = 863
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 499 PESCCVKKSILSTFAGNNCTVDAA 570
P SCCV+K I+S F NCT D A
Sbjct: 53 PASCCVRKIIVSNFLPLNCTKDEA 76
>02_02_0310 - 8842286-8843314
Length = 342
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 309 HHLHNDDHQQEDCVRDDHAVTLAYRSTA-SQERDHEHYSPDDYEDPRTDSKM 157
HH H+D++++++ + D A R + + R H H+ DD+E + M
Sbjct: 194 HHHHHDENEEDEHEQADEASPAVERLISFHRRRHHHHHHEDDHEQREEGAPM 245
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 345 DALAVGEEEDADHHLHNDDHQQEDCVRDDHAV 250
D + EE+D DHH H+ H D +HA+
Sbjct: 320 DTFRIAEEDDDDHHHHHHYHGDADDDDGEHAM 351
>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -1
Query: 336 AVGEEEDADHHLH--NDDHQQEDC 271
++ EE +DHH H N++H+ EDC
Sbjct: 969 SISIEESSDHHEHHHNEEHKAEDC 992
>08_01_1038 + 10540185-10540709
Length = 174
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -1
Query: 582 AAGIRGVDRAVVAGEGREDALLDAAGLGQRELTVVDSASVTAAFELSLQFREDSLGG 412
+ G+ G + AVV EGR +++ AG RE + SASV A + RED GG
Sbjct: 104 SVGVVGEEAAVVRMEGRGGSVVADAG-SAREAAALASASVATA---AGSAREDDGGG 156
>03_04_0035 - 16685674-16686376,16686594-16686640
Length = 249
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 354 ALLDALAVGEEEDADHHLHNDDHQQE 277
ALL L E++D DHH H+ H +
Sbjct: 224 ALLGQLEAEEDDDGDHHHHHHHHHHQ 249
>02_02_0125 - 7026037-7027377
Length = 446
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = -1
Query: 582 AAGIRGVDRAVVAGEGREDALLDAAGLGQRELTVVDSASVTAAFELSLQFREDSLGGLVC 403
A+G+R A A A L AAG G EL +VD + AA LQ ++ +GG
Sbjct: 37 ASGLRASVSASTATSSTSMAQLVAAGGGIDELRLVDERAAVAA----LQQQQLPVGGCEV 92
Query: 402 VSVRSLFE*HAD 367
+R++ E AD
Sbjct: 93 EKLRAVAEAAAD 104
>12_02_1155 +
26541137-26541142,26541244-26542623,26542730-26542852,
26542996-26543168,26543332-26543572,26543931-26544023,
26544092-26544232,26544358-26544450,26544633-26544837,
26544993-26545078,26545532-26545620,26545736-26545820,
26545898-26545954,26546319-26546399,26547130-26547321
Length = 1014
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 237 DTRESLHGRHVRNLLAGDHHCASGDQRPPLHLRREHQ 347
++ + L G V N+L GDH A +QR +R+ Q
Sbjct: 763 NSTDDLSGPDVSNVLVGDHQPADAEQRAQKREQRQKQ 799
>02_05_0688 - 30918499-30919602
Length = 367
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 516 DAAGLGQREL-TVVDSASVTAAFELSLQFREDSLGGLVCVSVRSLFE*HADAIHNALLDA 340
+ G G EL T V ++ + FE+ FR D++ GL+ SVR+ E + N L D
Sbjct: 96 EGCGGGVGELRTAVAASFPSLRFEI-YPFRADAVTGLISASVRAALEAPLNYARNYLADL 154
Query: 339 L 337
L
Sbjct: 155 L 155
>03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 345 DALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDD 187
DA G E+A H H C RDD V + +S+ +D++ DD
Sbjct: 1209 DAKNCGSGEEAGDHDSERTHGTLPCSRDDEPVHVPSDFGSSKSQDNQRDEDDD 1261
>02_04_0260 -
21350060-21350269,21350544-21350604,21350834-21350901,
21351274-21351483,21351684-21351724,21351923-21351972,
21352084-21352172,21352265-21352339,21352539-21352656,
21352689-21352771,21352854-21352970,21353857-21354074,
21354184-21354241,21354356-21354508
Length = 516
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 230 QHPKNAITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 99
QH +N I MK H P +W+ L+ Q I++ P
Sbjct: 187 QHWENKIQASDENGMMKEHSPLGKWIIGMKLSGPQMIKHVQEFP 230
>01_06_0288 -
28228673-28228744,28228866-28229071,28229316-28229554,
28229649-28229705,28229787-28229873,28229963-28230507,
28231574-28231714
Length = 448
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 300 ASGDQRPPLHLRREH---QGEHYGWRRR 374
A+ + PL LRRE +GE GWRRR
Sbjct: 3 AAAREEQPLLLRREEGEEEGEEVGWRRR 30
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 327 EEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRT-DSKMG 154
EEE A +LH ++ED V DD E D +HY+ + R+ + +MG
Sbjct: 205 EEEKARGYLHPHHLKEEDEVDDDDDEREEEMHCGGWEDDDDHYASTTTSETRSEEGEMG 263
>06_03_1269 + 28865236-28865819,28866124-28866754
Length = 404
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 189 RRGCNVRDRVLGMLWSDTRESLHGRHVRN 275
RR C+V D V +W ++HGR R+
Sbjct: 214 RRRCSVFDVVTAAIWQCRTRAIHGRRCRS 242
>11_04_0385 -
17022367-17022597,17022738-17022797,17022912-17022997,
17023056-17023218,17023540-17023598,17023693-17023798,
17023927-17023993,17024109-17024222,17024664-17025077,
17025799-17025887
Length = 462
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = -2
Query: 227 HPKNAITNITAPTTMKIHGPTARWVFSKSLTMVQFIR 117
HP+ A+ + AP + P W ++ + T+ F++
Sbjct: 294 HPQRAVVLVQAPGQARTDAPVQLWYYTSTRTVPVFVQ 330
>07_03_1567 -
27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 336 AVGEEEDADHHLHNDDHQQEDCVRDD-HAVTLAYRSTASQERDHEHYSPDDYEDPRTDSK 160
A +E+D +++ NDD +D DD V S + D + + + D D +
Sbjct: 196 AYEDEDDDEYNDENDDEDDDDADEDDPDDVDFEPESDTEKAADKDKFVDSENSDEEEDDE 255
Query: 159 MGL 151
+ L
Sbjct: 256 LEL 258
>07_03_0358 -
17177253-17177369,17177635-17177931,17178961-17179032,
17179117-17179383,17179752-17179910,17180194-17180295,
17180696-17180767,17181105-17181200,17181710-17181871,
17181941-17182021,17182837-17183094,17183173-17183275,
17183412-17183542,17184827-17184919,17184999-17185099,
17186271-17186355,17186487-17186701,17186779-17186842,
17187128-17187214,17188922-17189022,17190206-17190397,
17190533-17190599,17191211-17191351
Length = 1020
Score = 27.5 bits (58), Expect = 9.2
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = -1
Query: 531 EDALLDAAGLGQRELTVVDSASVTAAFELSLQFREDSLGGLVCVSVRSLFE*HADAIHN- 355
+D +L GLGQ +L D S A+FE L+ ++ C S++++ +A + N
Sbjct: 310 QDFVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPEN-----CESLKAIGHIYAKSGEND 364
Query: 354 -ALLDALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYE 181
A+ V + DH + E V+ D A + Y T E YS Y+
Sbjct: 365 KAIETFKKVTRIDPKDHQAFME--LGELLVQSDWATAMEYLKTVRLFTSLEVYSVSLYQ 421
>02_04_0346 -
22183145-22183264,22183877-22183966,22184140-22184220,
22184430-22184589,22184723-22184787,22185370-22185441,
22186163-22186327
Length = 250
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Frame = +3
Query: 9 CSQHGXWNEFCEICAILLQPGRRAPRPA---------ASGDWSSVPDELD-HGQRL 146
C++ G + CEIC + +PG AP +SGDWS + LD H R+
Sbjct: 66 CNEKG--DIICEICHVSYKPGYTAPPQVHHDETTIEISSGDWSISGNRLDLHDPRI 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,805
Number of Sequences: 37544
Number of extensions: 322967
Number of successful extensions: 1407
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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