Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O16
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0197 - 15522167-15523524,15525416-15525683 30 1.5
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 30 2.0
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 30 2.0
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 2.6
03_05_0292 + 22846273-22846377,22847161-22847823 29 2.6
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819 29 3.5
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 4.6
02_05_1081 + 33971950-33972606 29 4.6
01_07_0260 - 42364769-42364777,42364884-42365354 29 4.6
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 29 4.6
07_03_1257 - 25241194-25242018 28 6.0
07_01_1113 - 10292781-10293299 28 6.0
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 28 6.0
05_01_0495 - 4136871-4136906,4137043-4137171,4137545-4137694,413... 28 6.0
03_06_0711 - 35682293-35682952 28 6.0
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 28 6.0
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 28 8.0
03_01_0056 - 471338-471919,472013-472213 28 8.0
>09_04_0197 - 15522167-15523524,15525416-15525683
Length = 541
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 420 GWTRKLKRPRTNGTKVGTKP 479
G++++L RPR+NGT + TKP
Sbjct: 416 GFSQRLTRPRSNGTYLSTKP 435
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 431 PCPTKRPTLVRISRELHTP*PTVTVRSNIRAPLH 330
PCPT VR+S + P PTV V S + AP H
Sbjct: 146 PCPT-----VRVSSAVGAPCPTVRVSSAVGAPCH 174
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +1
Query: 478 RESTGGRN*GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPAR 657
R+ST GR+ G DG + A A H G+ AAR + + R G A P R
Sbjct: 28 RQSTRGRSTGSGDGEESEALAAAVHAGKISREDAAARRMARTKQTARKSTGGKAPRKPLR 87
Query: 658 XV 663
+
Sbjct: 88 AI 89
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 404 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 583
P L + +D+E+ E + G + K DAI EK +EL I K+ VLL+
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVLLK 96
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 490 GGRN*GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPARXVE- 666
GGR G DG AR G G G G R R H GEAA+G AR +
Sbjct: 60 GGRGDGARDGGGARGGGGRGARGGGGARGGGGR-----------HGGEAATGAEARRLPD 108
Query: 667 -RGASS 681
RGA++
Sbjct: 109 VRGAAA 114
>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
Length = 266
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 455 WNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 610
W G T A+ E E+T++W A E +Q + ++E +Y+ +L
Sbjct: 28 WRHGAPPTYDAVNSLFEAERTQEWPAGSLEETVQNAIKT--WEMELSYKAKL 77
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 428 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE-AAYRE 604
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + RE
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 605 R 607
R
Sbjct: 397 R 397
>02_05_1081 + 33971950-33972606
Length = 218
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = -2
Query: 518 PSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPT--KRPTLVRISRELHTP*PTVTVRSNI 345
P S P P D R+ R ++ PT K P R ++ HT ++S
Sbjct: 112 PVSSPSPAPVAAQAAAVDQRAPRVPAVAQAAPTDQKAPRPARSKQQQHTAAVPTKIKSVA 171
Query: 344 RAPLHRFPCCTGMLPDP 294
AP++ P + P+P
Sbjct: 172 DAPVYAGPAFSSASPEP 188
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 520 AVARAGTGAPHPGQEGERAPAA 585
A+A G GA G+EGE+ PAA
Sbjct: 132 AIAGCGAGAVDAGEEGEKRPAA 153
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 371 PTVTVRSNIRAPLHRFPCCTGMLPDPHQKCKDPSHQFSSGR 249
PT T R PLH F C + DPH PS++ +GR
Sbjct: 437 PTTTALQK-RGPLHIFLC---NVSDPHGNASQPSNRKGTGR 473
>07_03_1257 - 25241194-25242018
Length = 274
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -2
Query: 545 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCP-------TKRPTLVRISRE 387
A PA + +PSS P L+P S +++R RSLQ P P T P + SR
Sbjct: 15 AECPATSPSPSSPPPLQPRPRSPRPMP-QAVRHRSLQPPAPDVAGRDSTPSPASMTPSRC 73
Query: 386 LHTP*PTVTVRSNIRAPLHRFP 321
T T T R LH P
Sbjct: 74 RTTLASTTTTRRRPPRRLHSRP 95
>07_01_1113 - 10292781-10293299
Length = 172
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 143 SASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLA 304
S+ D AT + PG +RL + + + H + GP+ G+GL+
Sbjct: 91 SSVDAATKGNPPRSARTTSAPGSLRLPEVAQRVVELLHHRHWWFGPWALGLGLS 144
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 292 CGSGNIPVQQGNLCNGARILLRTVTVGH 375
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>05_01_0495 -
4136871-4136906,4137043-4137171,4137545-4137694,
4137782-4137847,4138124-4138168,4139022-4139102,
4139202-4139283,4139571-4139642,4140473-4140573,
4140690-4140806,4140929-4141249
Length = 399
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 226 YS*RMVPILPLENWCDGS 279
Y+ RM PI+P+ENW GS
Sbjct: 213 YNPRMDPIIPVENWRKGS 230
>03_06_0711 - 35682293-35682952
Length = 219
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = -2
Query: 545 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PT 366
AP+ A A +P SLP P S +D R + L P++ P+ S +P P
Sbjct: 19 APLLASAESPISLPPASAPTASTPAADER-LHPADAAL-APSQPPSEASSSAAALSP-PA 75
Query: 365 VTVRSNIRAPLHRFPCCTGMLPDP 294
S + AP H P P+P
Sbjct: 76 PPETSPLPAPSHSPPVPHSAAPEP 99
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 95 SGASKQTACTALVARGSASDVATHDQKTFAR 187
+ A K AC ALV+RG A+D + + AR
Sbjct: 630 AAAGKLEACRALVSRGGAADAGSETALSVAR 660
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 545 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPC 426
AP PA P P PP ++ G++LR +L LPC
Sbjct: 114 APPPAVGGGPDPSPPRCPPFVALSGAELRG-AGDALALPC 152
>03_01_0056 - 471338-471919,472013-472213
Length = 260
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 248 FFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHE 346
+F + V YT GV A YL + E+Y +H+
Sbjct: 47 YFGASIKVPSGYTAGVNTAFYLSNNELYPGQHD 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,194,287
Number of Sequences: 37544
Number of extensions: 422317
Number of successful extensions: 1698
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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