Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O16
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 143 6e-34
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 142 8e-34
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 142 8e-34
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 142 8e-34
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 142 8e-34
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 142 8e-34
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 138 1e-32
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 104 3e-22
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 34 0.41
BC037988-1|AAH37988.1| 904|Homo sapiens MICAL-like 2 protein. 33 1.3
AL833704-1|CAD98087.1| 680|Homo sapiens hypothetical protein pr... 33 1.3
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 33 1.3
AK074068-1|BAB84894.1| 585|Homo sapiens FLJ00139 protein protein. 33 1.3
AK027124-1|BAB15667.1| 704|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 33 1.3
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 33 1.3
BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. 32 1.7
BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 1.7
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 1.7
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 1.7
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 1.7
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 1.7
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 1.7
AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein... 32 1.7
AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 1.7
AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 1.7
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 1.7
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 31 3.8
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 31 3.8
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 31 3.8
BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein. 30 6.7
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 6.7
AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase... 30 6.7
AK223414-1|BAD97134.1| 415|Homo sapiens trans-prenyltransferase... 30 6.7
AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl... 30 6.7
BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein. 30 8.9
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 30 8.9
BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein. 30 8.9
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 30 8.9
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 30 8.9
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 30 8.9
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 30 8.9
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 30 8.9
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 30 8.9
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 30 8.9
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 30 8.9
AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein. 30 8.9
AF293341-1|AAK35009.1| 642|Homo sapiens collagen-like Alzheimer... 30 8.9
AF293340-1|AAK35008.1| 654|Homo sapiens collagen-like Alzheimer... 30 8.9
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 143 bits (346), Expect = 6e-34
Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EVK RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRR 209
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 142 bits (345), Expect = 8e-34
Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EVK RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRR 209
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 142 bits (345), Expect = 8e-34
Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EVK RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRR 209
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 142 bits (345), Expect = 8e-34
Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EVK RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRR 209
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 142 bits (345), Expect = 8e-34
Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EVK RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRR 209
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 142 bits (345), Expect = 8e-34
Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EVK RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRR 209
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 138 bits (335), Expect = 1e-32
Identities = 84/210 (40%), Positives = 117/210 (55%), Gaps = 7/210 (3%)
Frame = +2
Query: 71 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 232
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 409
EE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 410 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 590 AAYRERLMYAYTEVKRRLDYQLXKSNVERR 679
YRERL Y EV+ RLDY + N+ RR
Sbjct: 180 VTYRERLYRVYKEVRNRLDYHISVQNMMRR 209
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 104 bits (250), Expect = 3e-22
Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Frame = +2
Query: 257 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 433
S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK
Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIK-KYGPFVADFADKL 66
Query: 434 VEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLM 613
E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE YRERL
Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLY 126
Query: 614 YAYTEVKRRLDYQLXKSNVERR 679
Y EVK RLDY + N+ RR
Sbjct: 127 RVYKEVKNRLDYHISVQNMMRR 148
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 34.3 bits (75), Expect = 0.41
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 425 DKEVEATENEWNEGRNQTVKALEDAIEGEKTE-QWRAQGQELLIQAKKENVLLQLEAAYR 601
D ++EA N WN G + K +E EK + Q + I +K N + +L+ YR
Sbjct: 201 DSDIEARLNSWNLGLDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYR 260
Query: 602 ERLMYAYTEVKRRLD 646
+ + E R+L+
Sbjct: 261 SK-QHETEETIRKLE 274
>BC037988-1|AAH37988.1| 904|Homo sapiens MICAL-like 2 protein.
Length = 904
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -2
Query: 548 GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRP 411
G P PA A PSS P+ P S L+S R L LP + P
Sbjct: 472 GRPSPATAAVPSSQPKTEAPQASPLAKPLQSSSPRVLGLPSRMEPP 517
>AL833704-1|CAD98087.1| 680|Homo sapiens hypothetical protein
protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -2
Query: 548 GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRP 411
G P PA A PSS P+ P S L+S R L LP + P
Sbjct: 430 GRPSPATAAVPSSQPKTEAPQASPLAKPLQSSSPRVLGLPSRMEPP 475
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AK074068-1|BAB84894.1| 585|Homo sapiens FLJ00139 protein protein.
Length = 585
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -2
Query: 548 GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRP 411
G P PA A PSS P+ P S L+S R L LP + P
Sbjct: 485 GRPSPATAAVPSSQPKTEAPQASPLAKPLQSSSPRVLGLPSRMEPP 530
>AK027124-1|BAB15667.1| 704|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23471 fis, clone HSI11969. ).
Length = 704
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -2
Query: 548 GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRP 411
G P PA A PSS P+ P S L+S R L LP + P
Sbjct: 272 GRPSPATAAVPSSQPKTEAPQASPLAKPLQSSSPRVLGLPSRMEPP 317
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 589
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein.
Length = 626
Score = 32.3 bits (70), Expect = 1.7
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 200 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 379
E + G + EW HS T GP G +E E E L+L
Sbjct: 67 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 126
Query: 380 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 544
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 127 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 186
Query: 545 LLIQAK--KENVLLQLEAAYRERL 610
L +A+ +E+ L ++ A E L
Sbjct: 187 LAAEAEGDRESELSEVPEAGGEGL 210
>BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 1.7
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 200 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 379
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 380 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 544
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 545 LLIQAK--KENVLLQLEAAYRERL 610
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 461 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 285
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 284 CKDPSHQ 264
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 461 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 285
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 284 CKDPSHQ 264
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 461 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 285
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 284 CKDPSHQ 264
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 461 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 285
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 284 CKDPSHQ 264
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 461 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 285
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 284 CKDPSHQ 264
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein
B48 receptor type 2 protein.
Length = 1076
Score = 32.3 bits (70), Expect = 1.7
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 200 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 379
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 380 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 544
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 545 LLIQAK--KENVLLQLEAAYRERL 610
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 1.7
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 200 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 379
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 380 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 544
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 545 LLIQAK--KENVLLQLEAAYRERL 610
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 1.7
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 200 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 379
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 380 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 544
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 545 LLIQAK--KENVLLQLEAAYRERL 610
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 461 RSIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQK 285
RS R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 284 CKDPSHQ 264
K+PS Q
Sbjct: 230 VKEPSVQ 236
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 536 PARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP 375
P + +APSS P +PPV S GS S S ++ +K L+R TP
Sbjct: 797 PPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSSTTP 850
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 536 PARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP 375
P + +APSS P +PPV S GS S S ++ +K L+R TP
Sbjct: 828 PPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSSTTP 881
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 536 PARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP 375
P + +APSS P +PPV S GS S S ++ +K L+R TP
Sbjct: 797 PPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSSTTP 850
>BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein.
Length = 414
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -2
Query: 554 G*GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHT 378
G G+P A PS+ ++R V R G DL I +L + P + RISR HT
Sbjct: 21 GPGSPGRAGPLGPSAAAEVRAQVHRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHT 79
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 6.7
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 458 SIRSRSLQLPCPTKRPTLVRISREL-HTP*PTVTVRSNIRAPLHRFPCCTGMLPDPHQKC 282
S R R + P P +R + VR R+ H+ P +S +P T LP+P K
Sbjct: 171 SPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKV 230
Query: 281 KDPSHQ 264
K+PS Q
Sbjct: 231 KEPSVQ 236
>AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase
(TPT) protein.
Length = 415
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -2
Query: 554 G*GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHT 378
G G+P A PS+ ++R V R G DL I +L + P + RISR HT
Sbjct: 22 GPGSPGRAGPLGPSAAAEVRAQVHRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHT 80
>AK223414-1|BAD97134.1| 415|Homo sapiens trans-prenyltransferase
variant protein.
Length = 415
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -2
Query: 554 G*GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHT 378
G G+P A PS+ ++R V R G DL I +L + P + RISR HT
Sbjct: 22 GPGSPGRAGPLGPSAAAEVRAQVHRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHT 80
>AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl
diphosphate synthase protein.
Length = 415
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -2
Query: 554 G*GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHT 378
G G+P A PS+ ++R V R G DL I +L + P + RISR HT
Sbjct: 22 GPGSPGRAGPLGPSAAAEVRAQVHRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHT 80
>BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein.
Length = 306
Score = 29.9 bits (64), Expect = 8.9
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -2
Query: 554 G*GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHT 378
G G+P A PS+ ++R V R G DL I +L + P + RISR HT
Sbjct: 22 GPGSPGRAVPLGPSAAAEVRAQVHRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHT 80
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein.
Length = 496
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 GAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPARXVERGASSRP 687
GAV + G P PG++GE+ A +G+ + G +A+G+ E G S RP
Sbjct: 195 GAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG---EPGESGRP 250
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 78 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 137
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 138 EENLRKQ 144
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 93 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 152
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 153 EENLRKQ 159
>AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein.
Length = 578
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 479 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLX 658
+K E A+E K+EQ RAQ +E +E Q A Y+++L E + + L
Sbjct: 92 LKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLN 151
Query: 659 KSNVERR 679
+ N+ ++
Sbjct: 152 EENLRKQ 158
>AF293341-1|AAK35009.1| 642|Homo sapiens collagen-like Alzheimer
amyloid plaque component precursor type II protein.
Length = 642
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 GAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPARXVERGASSRP 687
GAV + G P PG++GE+ A +G+ + G +A+G+ E G S RP
Sbjct: 267 GAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG---EPGESGRP 322
>AF293340-1|AAK35008.1| 654|Homo sapiens collagen-like Alzheimer
amyloid plaque component precursor type I protein.
Length = 654
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 GAVARAGTGAP--HPGQEGERAPAARGRLQGEAHVRLH*GEAASGLPARXVERGASSRP 687
GAV + G P PG++GE+ A +G+ + G +A+G+ E G S RP
Sbjct: 267 GAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG---EPGESGRP 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,207,245
Number of Sequences: 237096
Number of extensions: 2304490
Number of successful extensions: 10277
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 9732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10269
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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