Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O16
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 79 2e-15
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 29 4.1
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical pr... 28 5.4
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 5.4
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 27 9.5
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 9.5
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 27 9.5
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 79.4 bits (187), Expect = 2e-15
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Frame = +2
Query: 182 ARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGL 361
ARP+ P K RL +P+ WF F TGV+GPY F GL +L +KE++V E + + +
Sbjct: 99 ARPMY--PPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFEEQGHMTV 156
Query: 362 SLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQG- 538
++ + G K+ L + N + +G Q + L++A+E +KT + +
Sbjct: 157 GWILFYLLVTRTAGYKIDQGLYNGYQERVN-FFKGLIQ--EDLKEAVEFKKTSAKQTESL 213
Query: 539 ---QELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDY----QLXKSNVER 676
+E A KE++ LQLEA YR+ + TE+KRR+DY + K+ VER
Sbjct: 214 NSIKESYPTALKESMALQLEATYRKNVQSVATELKRRIDYLKETEESKARVER 266
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 74.9 bits (176), Expect = 5e-14
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Frame = +2
Query: 203 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 382
P K RL +P+ WF F TG +GPY F GL +L +KE++V E + + + ++
Sbjct: 102 PPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 161
Query: 383 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWR----AQGQELL 550
+ G K+ A L K+ + + +G Q + L++A++ KT + A +E +
Sbjct: 162 LVSRTAGYKIDAGLYKDYQERVG-FFKGLIQ--EDLKEAVDFRKTSAAQTASFAALKEGM 218
Query: 551 IQAKKENVLLQLEAAYRERLMYAYTEVKRRLDY 649
+ K+++ LQLEAAYR+ + E+KRR++Y
Sbjct: 219 PTSLKDSMQLQLEAAYRKNVQTISNEIKRRIEY 251
>Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical
protein W04D2.4 protein.
Length = 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = -2
Query: 533 ARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PTVTVR 354
+R P S+ ++ + G + + RS ++PT I+ + H P P V V
Sbjct: 264 SREGIPKSIEVWEEELIDKVGIEWPPVSMRSPHRFTEPRKPTTTEIAIQEHWPRPRVFVG 323
Query: 353 SNIRAPLHRFP 321
N R L FP
Sbjct: 324 KNRRDHLMAFP 334
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQ----WRAQGQELLIQAKKENVLLQL 586
W DK E +W + +T E I+ E E W+ +++L + K+EN LL+L
Sbjct: 447 WSDKRNEENAIKWKQ---ETDNIPEVVIKNEDDETDVLYWKLSDEDVLERCKEENELLKL 503
Query: 587 EAAYRERL 610
+ +L
Sbjct: 504 DLLTEHQL 511
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/75 (30%), Positives = 29/75 (38%)
Frame = -2
Query: 545 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PT 366
+P P R +PS PQ S GS RS R R P +R + R P+
Sbjct: 448 SPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPS 507
Query: 365 VTVRSNIRAPLHRFP 321
+ RS P R P
Sbjct: 508 SSSRSRSPPPPPRRP 522
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 322 LAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKG 176
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 322 LAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKG 176
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical
protein K08C7.4 protein.
Length = 194
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 472 PNRESTGGRN*GREDG--AVARAGTGAPHPGQEGERAPAARGRLQGEA 609
P R + G R+ +E G +V + A ++ ERAP+ARGR Q A
Sbjct: 87 PRRSTRGKRSYDQETGGRSVRKVVKKAKEVNKKPERAPSARGRGQKPA 134
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 428 KEVEATENEWNEGRNQTVKALEDA-IEGEKT----EQWRAQGQELLIQAKK 565
KE+EA +W + + K L + +E +T E+W+ + QE+ IQ K+
Sbjct: 250 KEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQ 300
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 542 PVPARATAPSSLPQLRPPV 486
P P RATAP+SLP + PV
Sbjct: 130 PRPTRATAPASLPMHQNPV 148
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 428 KEVEATENEWNEGRNQTVKALEDAIE-GEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 604
KE E + E + + + + E + E+ ++ R +E+ ++ K E ++LEA RE
Sbjct: 440 KEEERKKKEEEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMRE 499
Query: 605 RLMYAYTEVKRR 640
+ A E+KRR
Sbjct: 500 KAEQA--EIKRR 509
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 27.5 bits (58), Expect = 9.5
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Frame = +2
Query: 233 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEY--YSGLSLLVMVYVAHVKFGP 406
EEW F G YT+ L TY KE ++ Y +S + ++ KF
Sbjct: 1314 EEWDSFQFCSKQHWGIYTWPAKLITYAPLKEQTAIDRSYEQFSEVEKYIVDMFQDEKFMT 1373
Query: 407 KLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKE 568
+L E++ + +N + L T +R Q E+L+ + KE
Sbjct: 1374 RLRELFSIEMKKEDEVFNAVHFSLFQGLFRCYGDVLTHAFRTQ-LEILLASSKE 1426
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = -2
Query: 536 PARATAPSSLPQLRPPV-LSRFGSDLRSIR----SRSLQLPC-PTKRPTLVRISRELHTP 375
P P + P RPP + +G + I+ + + Q+ PT++PTL+ +S H
Sbjct: 414 PTTQAPPITPPPYRPPTSVVTYGPESEEIQHAEHAENGQISAIPTRKPTLIEVSPSTHHH 473
Query: 374 *PTVTVRSN 348
V + SN
Sbjct: 474 HGIVNLESN 482
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 220 WLYS*RMVPILPLENWCDGSLHFWC 294
W Y V ++ L NWC H WC
Sbjct: 95 WFYLHSKVHLISLANWCSSVAH-WC 118
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 533 ARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PTVT 360
A +P P P FG + L+ P P RP R S L+TP +T
Sbjct: 444 ATRRSPPKGPSAPPAYTLPFGGSTPNHEPMDLEDPVPPPRPDRPRASTPLNTPVSQIT 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,307
Number of Sequences: 27780
Number of extensions: 328123
Number of successful extensions: 1080
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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