Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O10
(805 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 29 1.0
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 27 2.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.1
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 26 5.5
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 26 5.5
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 26 5.5
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 26 5.5
SPAC458.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.2
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 26 7.2
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 26 7.2
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 26 7.2
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.5
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.5
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 9.5
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 9.5
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 9.5
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = -2
Query: 444 TRIGSPASAKRSCTRASHSSPSFFPNDLMV*KNPSG-------LPSNTSRFETSLMSSIP 286
T++G+ +AK + + ++P F P + P+ +P ++ E S+ S+ P
Sbjct: 420 TKLGTKLNAKAISFKPNVAAPVFTPGKFTIPSKPAPVNASRPMMPQQSNNSEASIPSTTP 479
Query: 285 VTTTTLMDPSLKPNRFPYF 229
+ + + + KP+ P F
Sbjct: 480 QSPSVVSNGENKPSSSPVF 498
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 134 PTPLPIVGNLLSVLWESRKFKCH--HLIWQSWSQKYG 238
PTPL +V ++L + +R F C H + + WS ++G
Sbjct: 398 PTPLYLVSDILQLATHNRSFICSLPHFL-RRWSNEHG 433
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = -2
Query: 495 ATNLQSMLTIVMWNI*LTRIGSPASAKRSCTRASHSSPSFFPNDLMV*KNPSGLPSNTSR 316
+++ S +T + I + I S S+ S +S SSPS + S S ++
Sbjct: 550 SSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTS 609
Query: 315 FETSLMSSIPVTTTTLMDPS 256
+S+ SSI ++T L P+
Sbjct: 610 SPSSISSSISSSSTILSSPT 629
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 641 TELQEIHNALHQYLREIIKE-HQXNLQLGAPKDVIDAF 751
TE QE+HN ++R++I+ H L++ K V F
Sbjct: 193 TEDQEVHNFFQNWIRDLIQTYHFDGLRIDTAKHVQKEF 230
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 110 RGLCYPPGPTPLPIVGNLLSVLWESRK 190
R C G TPL + G ++S +WE+R+
Sbjct: 197 RFFCGCFGCTPLTLAGGVISDVWETRE 223
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 612 LRNGRKLRIPPLISTSLNKRITRLHSFLSRWSSKSYLF-PATNLQSMLTIVM 460
L+ G K +I+ ++TR+ + + ++ S Y+F P +Q +L V+
Sbjct: 824 LKTGNKDNFQNMINFDKRTKVTRILNEIKKFQSVGYMFNPINEVQELLNEVI 875
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 119 CYPPGPTPLPIVGNLLSVLWESRKFKC 199
C+PP P PIVGN + + + C
Sbjct: 408 CHPPFPWMSPIVGNSMVTVANGHNWMC 434
>SPAC458.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 503 RYDLEDQRLKKLCSLVMRLFKLVDMSGGI-LNFLPFLRHFVPRLIGFTELQEIHNALHQY 679
R E+ + KKL +L+ + +D+S GI LNF L+ L T + + Q+
Sbjct: 122 RNRFEESQNKKLVALLDKNSTTLDISSGILLNFTVVLKQLKHALGLHTSVDNSQEFILQF 181
Query: 680 LR 685
LR
Sbjct: 182 LR 183
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 542 SLVMRLFKLVDMSGGILNFLPFLRHFV 622
S VMR FK +D S +FL +LR ++
Sbjct: 267 SQVMRRFKEIDPSFNTEHFLQYLREYI 293
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 405 YSCVWPMLESRSWSIRCSTLQ*STYFGDWL 494
YSC+W LES S++ R + + YF D L
Sbjct: 42 YSCIWEELESGSFNTRVNIM----YFVDTL 67
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 485 RLVAGKRYDLEDQRLKKLCSL-VMRLFKLVDMSGGILNFLPF 607
R GK + D++L L ++++ K VD GILN +PF
Sbjct: 627 RARGGKPIIITDKKLDNLEGFTIIKVPKTVDCLQGILNVIPF 668
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -2
Query: 483 QSMLTIVMWNI*LTRIGSPASAKRSCTRASHSSPSFFPNDLMV*KNPSGLPSNTSRFET 307
+ + I WNI R AK +++ S SF+ N + N S SNTS T
Sbjct: 941 EQQMRIDRWNIFEERANLLRKAKDPSPKSASESSSFYQNGSDIDDNDSN-SSNTSNHTT 998
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 9.5
Identities = 27/99 (27%), Positives = 41/99 (41%)
Frame = -2
Query: 537 SFLSRWSSKSYLFPATNLQSMLTIVMWNI*LTRIGSPASAKRSCTRASHSSPSFFPNDLM 358
SF+SR +S + + P S +T N+ L GS + + S S + S +
Sbjct: 197 SFVSRAASPAMVGPGVPFYSSITGANGNV-LAPSGSLKAVENSDVIESSAEDSSNTD--- 252
Query: 357 V*KNPSGLPSNTSRFETSLMSSIPVTTTTLMDPSLKPNR 241
NPS PSN L SS+ T + P+ +R
Sbjct: 253 ---NPSTKPSNEMPISPLLSSSVFFKDTEMSTPNSNHSR 288
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 602 PFLRHFVPRLIGFTELQEIHNALHQYLREIIKEHQXNLQ 718
P L + L +TELQE Q L +++ E LQ
Sbjct: 2382 PVLSEIIAALYRYTELQEAERKSQQELADLVTESLQVLQ 2420
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 110 RGLCYPPGPTPLPIVGNLLSVLWESRKFK 196
+GL Y P + +P+ L +VL+ S KF+
Sbjct: 17 KGLQYTPLASSIPLENGLQNVLYPSSKFQ 45
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 348 NPSGLPSNTSRFETSLMSSIPVTTTTL 268
N S LPS S T +SSIP TT+++
Sbjct: 115 NSSSLPSIPSSSSTPSISSIPHTTSSV 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,517,056
Number of Sequences: 5004
Number of extensions: 79508
Number of successful extensions: 191
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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