Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_O10
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   6.3  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   6.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   8.3  

>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 330 SNTSRFETSLMSSIPVTTTTLMDPSL 253
           + T+RF T+  +S P T +   DP++
Sbjct: 126 TTTTRFPTTTTTSAPTTPSQWTDPTI 151


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 330 SNTSRFETSLMSSIPVTTTTLMDPSL 253
           + T+RF T+  +S P T +   DP++
Sbjct: 126 TTTTRFPTTTTTSAPTTPSQWTDPTI 151


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = +2

Query: 167  SVLWESRKFKCHHLI---WQSWSQKYG 238
            S LW  R+  C  LI   W+ + Q++G
Sbjct: 1984 STLWRQREEYCARLIQHAWKRYKQRHG 2010


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 262 IHQCGSGNRDRTHQRSFESRSV*RKA*WVLLYHEIV 369
           +++   GNR+R         SV     W L+Y+E++
Sbjct: 594 LYETNEGNRERVVTAGVPQGSVLGPTLWNLMYNEVL 629


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,434
Number of Sequences: 2352
Number of extensions: 19567
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)