Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_O09
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   3.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   4.3  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    20   9.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   9.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.8  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 217 EQRKTDQKTVDEAVIKAIGARPDKK 291
           ++ K D+K  D   ++A+  RP  K
Sbjct: 112 DENKLDKKNDDSPALRALLTRPQAK 136


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 217 EQRKTDQKTVDEAVIKAIGARPDKK 291
           ++ K D+K  D   ++A+  RP  K
Sbjct: 112 DENKLDKKNDDSPALRALLTRPQAK 136


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 293 CSADTSKRPSDSARANIP 346
           CSAD ++ P     AN+P
Sbjct: 167 CSADGTRIPGQLEPANVP 184


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 293 CSADTSKRPSDSARANIP 346
           CSAD ++ P     AN+P
Sbjct: 174 CSADGTRIPGQLEPANVP 191


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 217 EQRKTDQKTVDEAVIKAIGARPDKK 291
           ++ K D+K  D   ++A+  RP  K
Sbjct: 112 DENKLDKKDDDSPALRALLTRPQAK 136


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 321 EGRFEVSAEHLLVGSGSDGFDHSLVD 244
           EG FEV A       G + FD+ LV+
Sbjct: 42  EGIFEVKATAGDTHLGGEDFDNRLVE 67


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 321 EGRFEVSAEHLLVGSGSDGFDHSLVD 244
           EG FEV A       G + FD+ LV+
Sbjct: 42  EGIFEVKATAGDTHLGGEDFDNRLVE 67


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 170 RVMTSLPQKKRNTFHLSSAKPIR 238
           R++ +LP K +   HL   K IR
Sbjct: 96  RLVWTLPGKTKMIAHLKDKKKIR 118


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 170 RVMTSLPQKKRNTFHLSSAKPIR 238
           R++ +LP K +   HL   K IR
Sbjct: 410 RLVWTLPGKTKMIAHLKDKKKIR 432


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 170 RVMTSLPQKKRNTFHLSSAKPIR 238
           R++ +LP K +   HL   K IR
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKIR 665


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 170 RVMTSLPQKKRNTFHLSSAKPIR 238
           R++ +LP K +   HL   K IR
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKIR 665


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,386
Number of Sequences: 336
Number of extensions: 1825
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)