Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_O08
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006830-5|AAK68612.2|  569|Caenorhabditis elegans Hypothetical ...    34   0.13 
Z67734-2|CAA91528.2|  247|Caenorhabditis elegans Hypothetical pr...    31   1.2  

>AC006830-5|AAK68612.2|  569|Caenorhabditis elegans Hypothetical
           protein ZK105.5 protein.
          Length = 569

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 484 PHISCASPVNSDRELLPNYKCIN 552
           P I+C S + +++E LP YKC+N
Sbjct: 485 PFIACLSKIRANKEALPKYKCVN 507


>Z67734-2|CAA91528.2|  247|Caenorhabditis elegans Hypothetical
           protein B0198.2 protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -2

Query: 402 RGSQPCVPPPRSIRFSFALILNYSYFNYLFNKFVSHDE 289
           R S  C+PP ++ R S    L YS +N   NK  +HD+
Sbjct: 130 RSSIGCIPPRQAERPSPEQCLIYSQYNASLNKLPNHDD 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,643,992
Number of Sequences: 27780
Number of extensions: 306710
Number of successful extensions: 859
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)