Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O04
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 31 0.17
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 0.40
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 29 0.51
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 29 0.89
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 29 0.89
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.2
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 2.7
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb... 27 2.7
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 2.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.8
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 26 4.8
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 25 8.3
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.3
SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces pom... 25 8.3
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 25 8.3
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 31.1 bits (67), Expect = 0.17
Identities = 29/124 (23%), Positives = 57/124 (45%)
Frame = +3
Query: 249 NDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRSKQVDEIEVKTEKIEESITKAA 428
N E + + ++ A K+ E E + S++ + E + E++EE TK
Sbjct: 9 NAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEE-TKQL 67
Query: 429 TDVAQAIGGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMKVDRTVEPDEVQKKPDTREQ 608
+A D+++TEAE LSR + + + T +D L+ ++ + D + + R Q
Sbjct: 68 R--LKADNEDIQKTEAEQLSRKVELLEEELET-NDKLLRETTEKMRQTDVKAEHFERRVQ 124
Query: 609 QVKR 620
++R
Sbjct: 125 SLER 128
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 27.1 bits (57), Expect(2) = 0.40
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 458 ITPYSLSNISSSFCDALLYFFSLHFYFVHLFTS 360
I PY SN+ FC ++FSL +F LFTS
Sbjct: 97 IHPYD-SNVVPFFC--FFFYFSLFSFFSFLFTS 126
Score = 21.4 bits (43), Expect(2) = 0.40
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 617 FHLLLSSIWFFLDFIRFYCSVYLHP 543
F+ +FF RF+ ++++HP
Sbjct: 75 FYWFFFFFFFFSHCRRFHIAIFIHP 99
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 29.5 bits (63), Expect = 0.51
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +3
Query: 381 IEVKTEKIEESITKAATDVAQAIGGDVKQTEAELLSRVLGKINQTSTTLS------DLLV 542
++ + + + E+IT+ +T + + + E L ++ GK + T L D ++
Sbjct: 300 LDSQLQTVNENITRISTSIE--LKNTALEEEHGDLQQIRGKAKELETLLRGKRKRLDEVL 357
Query: 543 GMKVDRTVEPDEVQKKPDTREQQVKRLVSKAKTTEASPTRYSQR 674
+ R E + K ++E+ + L + TTE T YS++
Sbjct: 358 SVYEKRKDEHQSISKDFKSQEELISSLTTGLSTTEGHETGYSRK 401
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 28.7 bits (61), Expect = 0.89
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 579 VQKKPDTREQQVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQGXDSN 725
+ KKP + LV ++ +T S + Q+ A++PN T + D+N
Sbjct: 397 ILKKPSSLSTTDPTLVPQSSSTPKSAQKTPQKLPAFLPNRLTAETVDTN 445
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 28.7 bits (61), Expect = 0.89
Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 5/172 (2%)
Frame = +3
Query: 150 KDLRVIARCLSDKSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYR 329
K++ A +K + ++ E + + L+ + A K E +
Sbjct: 169 KEVETTAHAEEEKGPLTPDSEYAARQLTEELANKSSQEEGVDKQLRVVEATEKEHEEDGN 228
Query: 330 EK--FATSPDTRRSKQVDEIEVKTEKIEESI--TKAATDVAQAIGGDVKQTEAELLSRVL 497
E+ T P + QV+ EVK +++ E+ T VA+ + + K + + + V
Sbjct: 229 EENVTVTKPVEVATDQVESKEVKKKEVSETTEPTAPPVTVAEVLEIEDKVPKVDEVEEVH 288
Query: 498 G-KINQTSTTLSDLLVGMKVDRTVEPDEVQKKPDTREQQVKRLVSKAKTTEA 650
+ T + ++ G+ +++T++ Q+ P EQQ+ +S K TE+
Sbjct: 289 SPEAKVTENDVENVQSGIDIEKTIQLLNNQEIPS--EQQI---ISVDKATES 335
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 1.2
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Frame = +3
Query: 186 KSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFAT---SPDT 356
+ K+ D K ++ + K K D T+K+ ++ ++ A +SE++ R DT
Sbjct: 438 EKKETDIKSDAVEHSIKD--KEDSKTDKVDDIPQAAPAESNVSESDLRSPICCILGHVDT 495
Query: 357 RRSKQVDEIEVKTEKIEESITKAATDVAQAIGGDVKQTEA-ELLSRVLGKINQTSTTLSD 533
++K +D + + ++E A + Q IG E+ + ++V+ K + +
Sbjct: 496 GKTKLLDNL--RRSNVQEG---EAGGITQQIGATYFPIESIKQKTKVVNKKGKLQYNIPG 550
Query: 534 LLV 542
LL+
Sbjct: 551 LLI 553
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 27.1 bits (57), Expect = 2.7
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Frame = +3
Query: 198 NDGKPQVI--QDAKKKTVKNDPATEKI-QELLKS----MMAPPKISEAEYREKFAT---- 344
ND K + I + KKKTV DP+ E + Q+ L + P K + R A
Sbjct: 250 NDTKARRITRKGTKKKTVTFDPSLESVPQKRLNASSNVSSNPAKKTRVSPRRSTAASKKK 309
Query: 345 SPDTRRSKQVDEIEVKTEKIEESITKAATDVAQ 443
SP ++R+ DEIE E+ E S+ DVA+
Sbjct: 310 SPSSKRASS-DEIEKDKEEEEGSVAN-EEDVAK 340
>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 450 GGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMKVDRTVEPDEVQKKPDT 599
GGD ++ AE + ++ + Q++T +D L V+ + EP P T
Sbjct: 316 GGDWEKAYAEDFADLINRAKQSTTNKNDSLRNTAVESSTEPSTSNGFPAT 365
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 363 SKQVDEIEVKTEKIEESI--TKAATDVAQAIGGDVKQTEAELLSRVLGKINQTSTTL 527
S ++ ++ ++ +IEE I TK +I D Q AEL+ +L + T L
Sbjct: 10 SSSIELLKAESTEIEEKIKLTKILITKVSSISSDASQLYAELIPLLLDFLRNTEVNL 66
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.8
Identities = 25/105 (23%), Positives = 46/105 (43%)
Frame = +3
Query: 201 DGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRSKQVDE 380
+ + Q D++ VK D E +Q L + +I + E +PD+ S + E
Sbjct: 4301 ESQSQAFDDSEFMHVKEDEE-EDLQALGNA--EKDQIKSIDRDESANQNPDSMNSTNIAE 4357
Query: 381 IEVKTEKIEESITKAATDVAQAIGGDVKQTEAELLSRVLGKINQT 515
E +++ + + D++ D+KQT + L G INQ+
Sbjct: 4358 DEA--DEVGDKQLQDGQDIS-----DIKQTGEDTLPTEFGSINQS 4395
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 309 FLEVPSCFSTVLESFQ*PDHFLRFSSWHLELLEAS 205
F+E+ SCFS VL +F ++ SS +L +S
Sbjct: 3802 FIEMSSCFSKVLRAFNLKFQSMKLSSLKEKLRSSS 3836
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 470 CLFDITPYSLSNISSSFCDALLYFFSLHFYFVHL 369
CL D YS +N+ DALL F ++++ HL
Sbjct: 492 CLVDSARYSTANVPPLCLDALLNF--IYYFHEHL 523
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 351 DTRRSKQVDEIEVKTEKIEESITK 422
+ RR ++ +IE++ +K EES+ K
Sbjct: 23 ELRRQREEQQIEIRKQKREESLNK 46
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +3
Query: 141 KFRKDLRVIARCLSDKSKDNDGKPQVIQDAKKKTVKNDP----ATEKIQELLKSMMAPPK 308
K +D I DK+ + D Q IQ +K KN P + +++ APP+
Sbjct: 119 KRERDWNEIEENFEDKTWEADTTGQFIQIESRKKRKNSPDPWANLQTKPSFGETVQAPPE 178
Query: 309 ISEAEYRE 332
+ E + +E
Sbjct: 179 LPELKIKE 186
>SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 266
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 308 FWRCHHAFQQFLNLFSSRIIFYGFLLGILNYLRLPIIILGF 186
FW H + LN F S ++ +G ++ +Y R I + F
Sbjct: 88 FWVQMHPWFLILNFFISLVVLFGLIMKPYSYPRNYIFLFLF 128
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 243 VKNDPATEKIQELLKSMMAPPKISEAEYREK 335
V+N P EK++E LKS+ A I++ E ++
Sbjct: 205 VRNRPDIEKLKEQLKSLGATIVITDEELMDR 235
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,640,758
Number of Sequences: 5004
Number of extensions: 51734
Number of successful extensions: 233
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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