Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_O04
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 37 0.014
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 36 0.033
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 35 0.076
12_01_0393 - 3100230-3100714,3100973-3101097,3101271-3101399,310... 32 0.40
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 30 2.2
07_03_1579 - 27876472-27877347,27877839-27878285 29 2.8
01_05_0535 - 23001864-23005052 29 2.8
08_02_1448 - 27168389-27172021 29 5.0
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 28 6.6
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 28 6.6
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 28 6.6
01_01_1071 - 8446761-8447440,8449334-8450489 28 6.6
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 8.7
02_02_0130 + 7062063-7063370 28 8.7
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +3
Query: 186 KSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRS 365
K K G + + AKKK K KI++ + KI E + E D S
Sbjct: 437 KGKRGGGANEKDKRAKKKQAKQKKNNRKIKDKERDEKFEAKILERLHDETAIDDSDGLSS 496
Query: 366 KQVDEIEVKTEKIEESITKAATDV 437
KQ +E+ K E +EE + D+
Sbjct: 497 KQAEEVTTKVENLEEGASDRQGDL 520
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 35.9 bits (79), Expect = 0.033
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Frame = +3
Query: 177 LSDKSKDNDGKPQVIQDAKKKTVKNDPATEKI--QELLKSMMAPPKISEAEYREKFATSP 350
LS + +D DGK + + D ++ + E + E + A I+E++ R + S
Sbjct: 1025 LSKEVEDADGKIKQLSDTVQRLEETIQEREALLLAERQEKEEASAVIAESQARNEAFASK 1084
Query: 351 DTRRSKQVDEIEVKTEKIEESITKAATDVA----QAIGGDVKQTEAEL----LSRVLGKI 506
KQ+D ++ ++ EE+ITK + V Q V+ EA+ L R G
Sbjct: 1085 LEDAEKQIDLLQETVQRFEEAITKLQSSVTIEKQQHEETVVQLAEAQAKIDELLREAGDT 1144
Query: 507 NQTSTTLSDLLVGMKVDRTVEPDEVQKKPDTREQQVKRLVSKAK 638
++ ST L + ++ T E D + + K+L+S+A+
Sbjct: 1145 DEKSTQLETTIQRLEESLT-EKDALLTTERQETEATKKLLSEAQ 1187
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 34.7 bits (76), Expect = 0.076
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Frame = +3
Query: 249 NDPATEKIQELLKSMMAPPKISE-AEYREKFATSPDTRRSKQVDEI--EVKTEKIEESIT 419
+DPA E L + P+ AE+ ++ + D ++SKQ D++ EV E+I ES
Sbjct: 241 DDPAKEDDTAYLDHKESFPEDKVIAEHADEEVKAED-QQSKQADDMDAEVLQEEIPESKE 299
Query: 420 KAATDVAQAIGGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMKV----DRTVEPDEVQK 587
+ QA V EA L + S + V ++T E D +
Sbjct: 300 SDLPETEQAEEASVDDQEALNQQPALETNDSLSVKAEETCHQSNVATCGEKTPEDDATTR 359
Query: 588 KP--DTREQQVKRLVSKAKTTEASPTRYSQRKSA 683
+P DT+E+Q + V + K EA T + ++S+
Sbjct: 360 EPTVDTKEEQNQGSVEEMKDAEAVDTEETVQQSS 393
>12_01_0393 -
3100230-3100714,3100973-3101097,3101271-3101399,
3102480-3102508
Length = 255
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = +3
Query: 168 ARCLSDKSKDNDGKPQV----IQDAKKKTVKNDPATEKIQELLKSMMAPP----KISEAE 323
A CL ++ DG QV + D T DP ++Q+ MAPP S A
Sbjct: 123 AMCLENQEGSKDGTEQVEFHGVPDPNMDTEPQDPEAAEMQDAADRNMAPPIGGSNASRAN 182
Query: 324 YREKFATSPDTRRSKQVD 377
+ AT P R +Q+D
Sbjct: 183 HPSMAATQPANR--EQID 198
>11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +3
Query: 375 DEIEVKTEKIEESITKAATDVA----QAIGGDVKQTEAELLSRVLGKINQTSTTLSDLLV 542
+E E K K+E +++ + + GD+K + + LS GK+ + T+++L
Sbjct: 752 EEYEAKCRKLEAQLSRDSREARLWRLANTNGDLKVKQDKELSSAAGKLVECQKTIANL-- 809
Query: 543 GMKVDRTVEPDEVQKKPDTREQQVKRLVSKAKTTEASPTRYS 668
G ++ + D V +P+ E L + E P ++
Sbjct: 810 GRQLKSLTDLDSVTAEPEKLESGDALLDFREPDVEVPPAGFA 851
>07_03_1579 - 27876472-27877347,27877839-27878285
Length = 440
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +3
Query: 447 IGGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMKVDRTVEPDEVQKKPDTREQQVKRLV 626
IG + Q A L R LG + + L DL V K T+E D +KK ++++KR
Sbjct: 372 IGQEPSQLLAGWLRR-LGVVQEVEQVLKDLAVDRK--NTLEVD--RKKNLASDRKIKRRR 426
Query: 627 SKAKTTEAS 653
SK+K + AS
Sbjct: 427 SKSKRSFAS 435
>01_05_0535 - 23001864-23005052
Length = 1062
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +3
Query: 255 PATEKIQ---ELLKSMMAPPKISEAEYREKFATSPDTRRSKQVDEIEVKTEKIEESITKA 425
P TE +Q ++KS + P K++ + KQ+ + +K E++
Sbjct: 566 PITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDN 625
Query: 426 ATDVAQAIGGDVKQTEAELLSRVLGK 503
A A GDV E L SR+ G+
Sbjct: 626 ALMSCYAKSGDVDSCE-RLFSRMSGR 650
>08_02_1448 - 27168389-27172021
Length = 1210
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 468 TEAELLSRVLGKINQTSTTLSDLLVGMKVDRTVEPDEVQ 584
T ++ LS VL K+N+ +++L G+ VDRT P E++
Sbjct: 115 TMSKKLSNVLEKMNKLVDKMNEL--GLSVDRTESPQELK 151
>07_01_0890 -
7437901-7439339,7439452-7439657,7439841-7440171,
7440268-7440405,7440619-7440874,7440963-7441318,
7441421-7441709
Length = 1004
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 258 ATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRS-----KQVDEIEVKTEKIEESITK 422
+T+++ E++K + I + E F+ S D R +++ + +K+ + +
Sbjct: 525 STQEMGEMIKGVSIGYVICDGELAGVFSLSDDCRTGAAEAIRELGSLGIKSVMLTGDSSA 584
Query: 423 AATDVAQAIGGDVKQTEAELL 485
AAT +GG +++ +ELL
Sbjct: 585 AATHAQGQLGGVMEELHSELL 605
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 28.3 bits (60), Expect = 6.6
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +3
Query: 186 KSKDNDGKPQV-IQDAKKKTVKNDPATEKI-QELLKSMMAPPKISEA--EYREKFATSPD 353
K+ ND V +++ KKT NDP E I +E K+ + + E + + D
Sbjct: 1225 KTAANDHVEDVTVEEPDKKTAANDPVEEVIPEETDKNTTTNDPVEDVTIEEPDMKTEAND 1284
Query: 354 TRRSKQVDEIEVKTEKIEESITKAATDVAQAIGGDVKQ 467
V+E V+ IEE T A D I + Q
Sbjct: 1285 PVEEATVEEPAVEAGTIEEIATAEARDEKTMITEETAQ 1322
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 28.3 bits (60), Expect = 6.6
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
Frame = +3
Query: 186 KSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRS 365
+S+D DG P ++KK+T D +++K L M +E R+ A S
Sbjct: 300 ESEDEDGFPVSFSESKKRT---DGSSKKKGNLNNKMS-----TEDRKRKSSAVGDHHDPS 351
Query: 366 KQV-DEIEVKTEKIEESITKAATDVAQAIGGDVKQTE--AELLSRVLGKINQTSTTLSDL 536
+V DE + ++K +++ KA + ++KQ + A+L+ K +T+ ++
Sbjct: 352 GEVKDENDGVSKKNKKA--KAKKTAVGGVEKEIKQEDSPADLVDAKQKKNKNKNTSEAEA 409
Query: 537 LVGMKVDRTVEPDEVQKKPDTREQQVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQ 710
D+T + + DT ++ K+ +K K T+ +Q N + Q
Sbjct: 410 GAHQNTDKT-KHIHTDAEEDTAQEASKKKKNKKKKTQEKNESENQTPKTQEKNAKGNQ 466
>01_01_1071 - 8446761-8447440,8449334-8450489
Length = 611
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/93 (26%), Positives = 41/93 (44%)
Frame = +3
Query: 294 MAPPKISEAEYREKFATSPDTRRSKQVDEIEVKTEKIEESITKAATDVAQAIGGDVKQTE 473
MA P A E+ T P+TRR ++ + I ++ A + + G T+
Sbjct: 144 MADPDGGVAAAEEEDETEPETRRRRR--RGARAEDDIHAWLSAAMGNQGTCLDG-FHGTD 200
Query: 474 AELLSRVLGKINQTSTTLSDLLVGMKVDRTVEP 572
+ LL RV + Q + +S+LL K R + P
Sbjct: 201 SRLLRRVESAVTQLTQLVSNLLAMHKKLRDITP 233
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 576 EVQKKPDTREQQVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQGXD 719
E QKK + E+ KR++ K+K +A + Q+ VP R G +
Sbjct: 1302 EAQKKLEKEEEDEKRMLQKSKELDA----FDQQNHGAVPQYHDRSGSE 1345
>02_02_0130 + 7062063-7063370
Length = 435
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 534 LLVGM--KVDRTVEPDE-VQKKPDTREQQVKRLVSKAKTTEASPTRYSQRKSAYVP 692
LL GM K +TVEP KK ++QQ + V+K+ + +S R R + + P
Sbjct: 217 LLPGMLEKFPKTVEPTRWWPKKKQQQQQQQRAAVNKSNSFGSSSRRRGARGNGWTP 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,162,676
Number of Sequences: 37544
Number of extensions: 288141
Number of successful extensions: 950
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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