Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_N21
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    94   1e-18
UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...    92   7e-18
UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC clone:F1...    33   3.6  
UniRef50_Q4RZE9 Cluster: Chromosome undetermined SCAF14935, whol...    32   8.3  

>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 94.3 bits (224), Expect = 1e-18
 Identities = 50/96 (52%), Positives = 53/96 (55%)
 Frame = +3

Query: 210 QEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXX 389
           +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S     
Sbjct: 31  EEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKISRAEEE 90

Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEA 497
                                   DIEEKRQRLEEA
Sbjct: 91  RKMAERKKQEEERRIREIEEKKQRDIEEKRQRLEEA 126


>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score = 91.9 bits (218), Expect = 7e-18
 Identities = 49/100 (49%), Positives = 53/100 (53%)
 Frame = +3

Query: 198 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSX 377
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+ 
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTR 85

Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEA 497
                                       +IEEKR RLEEA
Sbjct: 86  AEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEA 125


>UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC
           clone:F14O13; n=2; Arabidopsis thaliana|Rep: Genomic
           DNA, chromosome 3, BAC clone:F14O13 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 224

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 195 KPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 314
           K   K +  G    IK +D++   +  QLKE   EWRK+R
Sbjct: 17  KETSKDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56


>UniRef50_Q4RZE9 Cluster: Chromosome undetermined SCAF14935, whole
          genome shotgun sequence; n=1; Tetraodon
          nigroviridis|Rep: Chromosome undetermined SCAF14935,
          whole genome shotgun sequence - Tetraodon nigroviridis
          (Green puffer)
          Length = 735

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 97 KSVTQSLGTGSWTGSTATLECGVRGEP 17
          K+VT +    S+ G TA LEC V GEP
Sbjct: 4  KAVTPTKSVSSYLGDTALLECKVSGEP 30


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,567,315
Number of Sequences: 1657284
Number of extensions: 5180119
Number of successful extensions: 17818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17802
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)