Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_N17
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.31 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.31 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    24   0.54 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.72 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   3.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   8.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   8.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 190 SPYASPAAVPITYSALPSATYYVR*NKIISRH 285
           SPY  P+A+PI+ S+LPS  Y      +I  H
Sbjct: 204 SPY--PSALPISTSSLPSDFYRFSPTGLIPPH 233


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 190 SPYASPAAVPITYSALPSATYYVR*NKIISRH 285
           SPY  P+A+PI+ S+LPS  Y      +I  H
Sbjct: 96  SPY--PSALPISTSSLPSDFYRFSPTGLIPPH 125


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 166 PGLVPPVISPYASPAAVPITYSALPSATYYV 258
           PG  PP++SP+ +  A    + A P A  ++
Sbjct: 197 PGGAPPLVSPFLAAMAHRPPHFAFPGAPGHI 227


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 0.72
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 323 MQNPEKYINHF*RWREII 270
           + NP++Y+  F RW++I+
Sbjct: 434 LTNPKQYMEIFARWKDIL 451


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 137 GRSCGAGDWGCLRAWSGQRHGQQSEENEE 51
           GRS G G       +SGQ+HG QS+   +
Sbjct: 12  GRSTGRG-----LKYSGQQHGPQSDSRNQ 35



 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 169 GLVPPVISPYASPAAV 216
           G++    SPYASP  V
Sbjct: 332 GVIKREASPYASPMTV 347


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 123 TATSSIHRPGLRLYTRLSTSCDISIRFSGCCPHHL 227
           TAT  +   GL LY   + SCD      GC  H L
Sbjct: 122 TATEQLCIGGL-LYNERTHSCDWPENVDGCQKHPL 155


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 148 LDYVYTPGLVPPVISP 195
           +DY++T  L+P +I+P
Sbjct: 131 IDYLFTVYLLPIIINP 146


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 37  TCPTNSSFSSLCWPCLWPLQALRQ 108
           TCP    ++     C WP +A ++
Sbjct: 137 TCPNGLVYNDKAGICSWPDEAKKK 160


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 28  KQTTCPTNSSFSSLCWPCLW 87
           KQ TCP+  +F      C W
Sbjct: 63  KQITCPSGLAFDIDKQTCDW 82


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 15  LSFLETNNMS 44
           LS LETNN+S
Sbjct: 500 LSMLETNNLS 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,009
Number of Sequences: 336
Number of extensions: 1618
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)