Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_N17
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81143-1|CAB03513.1|  381|Caenorhabditis elegans Hypothetical pr...    31   0.48 
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    30   0.63 
AF040652-6|AAY55875.1|  149|Caenorhabditis elegans Hypothetical ...    29   1.1  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    27   5.9  

>Z81143-1|CAB03513.1|  381|Caenorhabditis elegans Hypothetical
           protein ZK265.2 protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
 Frame = +1

Query: 1   ACFSPCPSSKQTTCPTNSSFSSLCWPCLWPLQALRQPQSPAPQL-----LPYTGLDYVYT 165
           A + PCP        T SS S           A +   SPAP        P     +   
Sbjct: 280 AAYCPCPPRSAEMAATGSSDSQPASYEAPAPAATKGYDSPAPAAPKGYDAPAPTAPHPPP 339

Query: 166 PGLV-PPVISPYASPAAVPITYSALPSATYYVR*NKIISRHL 288
           P  V PP +  Y SPA V   + A P+A  Y R  K+   H+
Sbjct: 340 PAPVAPPKLHDYESPAPVADAHDAAPAAQPYKR-RKVARAHM 380


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 30.3 bits (65), Expect = 0.63
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 85  WPLQALRQPQSPAPQLLPYTGLDYVYTPGLVPPVISPYASPA-AVPITYSALPS 243
           +P Q   +P    PQL  + G  YVY P    P +S Y SP+ A P      P+
Sbjct: 243 YPAQQEIKPSQTVPQLSAHHG--YVYGPQQAMPQLSQYPSPSTAAPAPVPEQPT 294


>AF040652-6|AAY55875.1|  149|Caenorhabditis elegans Hypothetical
           protein T05A8.8 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 64  SLCWPCLWPLQALRQPQSPAPQLLPYTGLDYV 159
           S CW  + P  AL  PQ P PQ+     +DYV
Sbjct: 42  SSCWLVV-PSSALIHPQVPVPQIQVMNSMDYV 72


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 94  QALRQPQSPAPQLLPYTGLDYVYTPGLVPPVISPYASPAA 213
           Q + +P +P PQ++P     +V T   V P ++ Y  PAA
Sbjct: 394 QVVVEP-APQPQVIPQAPETFVETSAPVAPQVTEYPIPAA 432


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 94  QALRQPQSPAPQLLPYTGLDYVYTPGLVPPVISPYASPAA 213
           Q + +P +P PQ++P     +V T   V P ++ Y  PAA
Sbjct: 394 QVVVEP-APQPQVIPQAPETFVETSAPVAPQVTEYPIPAA 432


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.1 protein.
          Length = 448

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 106 QPQSPAPQLLPYTGLDYV-YTPGLVPPVISPYASPAAVPITYSALPSAT 249
           +P S  P   P   +  V YTPG  PP   P+   A    TY  +P A+
Sbjct: 147 RPGSTPPATFPPGSISTVRYTPGPTPP--GPWTYTAPPYYTYRTVPPAS 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,692,733
Number of Sequences: 27780
Number of extensions: 145922
Number of successful extensions: 545
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)