Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_N16
(319 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm... 75 4e-13
UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm... 54 6e-07
UniRef50_Q00UL7 Cluster: Putative Sm protein F; n=1; Ostreococcu... 50 1e-05
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 47 7e-05
UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae... 44 5e-04
UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein, put... 42 0.003
UniRef50_Q01LE0 Cluster: OSIGBa0096P03.5 protein; n=31; Eukaryot... 40 0.008
UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm... 39 0.025
UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta... 38 0.033
UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotei... 37 0.076
UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4; ... 36 0.13
UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf prot... 36 0.23
UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, puta... 36 0.23
UniRef50_Q010Y9 Cluster: Ypt/Rab GTPase activating protein; n=13... 36 0.23
UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20... 36 0.23
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 35 0.30
UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like prot... 33 0.93
UniRef50_A7CXH6 Cluster: Putative uncharacterized protein precur... 32 2.1
UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 32 2.1
UniRef50_Q6CPH1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 32 2.1
UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; ... 32 2.8
UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm... 32 2.8
UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotei... 31 3.8
UniRef50_A5WF65 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;... 31 5.0
UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: A... 31 6.6
UniRef50_Q758M9 Cluster: AEL274Cp; n=1; Eremothecium gossypii|Re... 31 6.6
UniRef50_P54999 Cluster: Small nuclear ribonucleoprotein F; n=11... 31 6.6
UniRef50_A5ZIH4 Cluster: Putative uncharacterized protein; n=2; ... 30 8.7
UniRef50_A6S0C4 Cluster: Predicted protein; n=2; Ascomycota|Rep:... 30 8.7
UniRef50_Q38674 Cluster: Superinfection exclusion protein A; n=2... 30 8.7
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 30 8.7
>UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Homo sapiens (Human)
Length = 80
Score = 74.5 bits (175), Expect = 4e-13
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQRRRI 304
EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQ+RR+
Sbjct: 46 EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM 80
Score = 58.4 bits (135), Expect = 3e-08
Identities = 29/37 (78%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Frame = +1
Query: 61 SLRKLCPR-FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
SLRK P F++QI GRPVVVKLNSGVDYRGVLACL+
Sbjct: 2 SLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLD 38
>UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Schizosaccharomyces pombe (Fission yeast)
Length = 75
Score = 54.0 bits (124), Expect = 6e-07
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNNVLYIS 286
E+TEEYVNG+ N YGDAFIRGNNVLY+S
Sbjct: 43 ERTEEYVNGKKTNVYGDAFIRGNNVLYVS 71
Score = 39.9 bits (89), Expect = 0.011
Identities = 13/28 (46%), Positives = 25/28 (89%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ ++ G+ V+++L+SGVDY+G+L+CL+
Sbjct: 8 FLNKVIGKKVLIRLSSGVDYKGILSCLD 35
>UniRef50_Q00UL7 Cluster: Putative Sm protein F; n=1; Ostreococcus
tauri|Rep: Putative Sm protein F - Ostreococcus tauri
Length = 173
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 209 EEYVNGQLKNKYGDAFIRGNNVLYISTQRRRI 304
+EYVNGQLKNKYGDAFIRGNN ++ +R I
Sbjct: 131 QEYVNGQLKNKYGDAFIRGNNDRRLTRERLSI 162
Score = 34.7 bits (76), Expect = 0.40
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 8/36 (22%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYR--------GVLACLE 168
F++ I G+ V+V+LNSG DYR GVLACL+
Sbjct: 58 FLRAIEGKTVLVRLNSGADYRGARSRRSIGVLACLD 93
>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 83
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNNVLYIS 286
E+ EE+V GQ K YGDAF+RGNNV+YI+
Sbjct: 52 EKAEEWVAGQKKRSYGDAFVRGNNVMYIA 80
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ +I G V VKLNSGV Y+G L ++
Sbjct: 17 FLGEIIGNMVTVKLNSGVIYKGELQSVD 44
>UniRef50_A1CE19 Cluster: LSM domain protein; n=3;
Trichocomaceae|Rep: LSM domain protein - Aspergillus
clavatus
Length = 108
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNNVLYIS 286
EQ++E+++G+L+ YGDAFIRGNN LY S
Sbjct: 49 EQSKEFMDGKLRRSYGDAFIRGNNGLYHS 77
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ +I G PV VKLNSGV Y+G L ++
Sbjct: 14 FLSEIIGAPVTVKLNSGVVYKGELQSVD 41
>UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein,
putative; n=3; Aconoidasida|Rep: U6 small nuclear
ribonucleoprotein, putative - Theileria parva
Length = 77
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNNVLYIS 286
E T E+++G + YGDAFIRGNNV YIS
Sbjct: 44 ENTCEFLDGVMVKSYGDAFIRGNNVYYIS 72
Score = 33.9 bits (74), Expect = 0.70
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
+I I +PV+VKLN+G D++G LA L+
Sbjct: 9 YITSITRKPVLVKLNNGSDFKGTLASLD 36
>UniRef50_Q01LE0 Cluster: OSIGBa0096P03.5 protein; n=31;
Eukaryota|Rep: OSIGBa0096P03.5 protein - Oryza sativa
(Rice)
Length = 413
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYR 147
F++ I GRPVVVKLNSGVDYR
Sbjct: 24 FLKSIRGRPVVVKLNSGVDYR 44
>UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6,
putative; n=1; Filobasidiella neoformans|Rep: U6
snRNA-associated sm-like protein lsm6, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 88
Score = 38.7 bits (86), Expect = 0.025
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +2
Query: 200 EQTEEYVNGQLKNK-YGDAFIRGNNVLYIS 286
EQ EE+ G++K YGD F+RGNNVLYIS
Sbjct: 55 EQAEEWA-GEVKTAAYGDCFLRGNNVLYIS 83
Score = 35.5 bits (78), Expect = 0.23
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F++ I G+ V V++ SGVDY G+L CL+
Sbjct: 20 FLRNIVGKRVKVRIGSGVDYTGLLTCLD 47
>UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 83
Score = 38.3 bits (85), Expect = 0.033
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNN 271
E T+EY +G+L YGD+FIRGNN
Sbjct: 44 ENTKEYCDGELVKAYGDSFIRGNN 67
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
+I I +PV+VKLN+G +RG+L+ L+
Sbjct: 9 YIANITRKPVIVKLNNGTRFRGLLSSLD 36
>UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotein
F; n=7; Magnoliophyta|Rep: Probable small nuclear
ribonucleoprotein F - Arabidopsis thaliana (Mouse-ear
cress)
Length = 88
Score = 37.1 bits (82), Expect = 0.076
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 206 TEEYVNGQLKNKYGDAFIRGNNVLYI 283
TEEY++GQL G+ IR NNVLY+
Sbjct: 48 TEEYIDGQLTGNLGEILIRCNNVLYV 73
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ + G+ V+VKL G++Y+G LA ++
Sbjct: 11 FLNNLTGKTVIVKLKWGMEYKGFLASVD 38
>UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 95
Score = 36.3 bits (80), Expect = 0.13
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNN 271
E+ EE+V+G+ K +GDAF+RGNN
Sbjct: 52 EKCEEWVHGKKKTVHGDAFVRGNN 75
>UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf
protein; n=1; Mus musculus|Rep: PREDICTED: similar to
Snrpf protein - Mus musculus
Length = 209
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 206 TEEYVNGQLKNKYGDAFIRGNNVLYI 283
TEEY++G L G+ IR NNVLYI
Sbjct: 170 TEEYIDGALSGHLGEVLIRCNNVLYI 195
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ + G+PV+VKL G++Y+G L ++
Sbjct: 133 FLNGLTGKPVMVKLKWGMEYKGYLVSVD 160
>UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F,
putative, expressed; n=5; Oryza sativa|Rep: Small
nuclear ribonucleoprotein F, putative, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 86
Score = 35.5 bits (78), Expect = 0.23
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 206 TEEYVNGQLKNKYGDAFIRGNNVLYI 283
TEEY++GQ G+ IR NNVLY+
Sbjct: 48 TEEYIDGQFSGNLGEILIRCNNVLYL 73
Score = 31.9 bits (69), Expect = 2.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ + G+PV+VKL G++Y+G L ++
Sbjct: 11 FLNNLTGKPVIVKLKWGMEYKGYLVSVD 38
>UniRef50_Q010Y9 Cluster: Ypt/Rab GTPase activating protein; n=13;
Eukaryota|Rep: Ypt/Rab GTPase activating protein -
Ostreococcus tauri
Length = 836
Score = 35.5 bits (78), Expect = 0.23
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 206 TEEYVNGQLKNKYGDAFIRGNNVLYI 283
TEEY++G+L+ G+ IR NNV+Y+
Sbjct: 804 TEEYIDGELQGALGEVLIRCNNVMYL 829
>UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20;
Euteleostomi|Rep: Small nuclear ribonucleoprotein F -
Homo sapiens (Human)
Length = 86
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 206 TEEYVNGQLKNKYGDAFIRGNNVLYI 283
TEEY++G L G+ IR NNVLYI
Sbjct: 47 TEEYIDGALSGHLGEVLIRCNNVLYI 72
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ + G+PV+VKL G++Y+G L ++
Sbjct: 10 FLNGLTGKPVMVKLKWGMEYKGYLVSVD 37
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 35.1 bits (77), Expect = 0.30
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNN 271
++T+E+V G YGD FIRGNN
Sbjct: 55 DETKEFVGGDQARNYGDVFIRGNN 78
>UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein - Entamoeba histolytica
HM-1:IMSS
Length = 71
Score = 33.5 bits (73), Expect = 0.93
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNN 271
E EY+NG N+Y + FIRGNN
Sbjct: 47 ENAIEYINGNKDNEYPECFIRGNN 70
>UniRef50_A7CXH6 Cluster: Putative uncharacterized protein
precursor; n=1; Opitutaceae bacterium TAV2|Rep: Putative
uncharacterized protein precursor - Opitutaceae
bacterium TAV2
Length = 435
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 194 LWEQTEEYVNGQLKNKYGDAFIRGNN 271
L EQT E + GQL + G+AFI+G N
Sbjct: 367 LAEQTREQITGQLGQEGGEAFIKGQN 392
>UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 98
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 203 QTEEYVNGQLKNKYGDAFIRGNNVLYI 283
+T EYV G+ + GD IR NN+L+I
Sbjct: 49 ETSEYVGGKTEGVMGDVIIRCNNILHI 75
>UniRef50_Q6CPH1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 112
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 209 EEYVNGQLKNKYGDAFIRGNNVLYI 283
EE +N K GD FIR NNVLY+
Sbjct: 53 EEIINDVSSGKVGDIFIRCNNVLYV 77
>UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 67
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 194 LWEQTEEYVNGQLKNKYGDAFIRGNNVLYIS 286
L EE+++ K G FIR NNVLYIS
Sbjct: 17 LLNDCEEWIDNTKKGTLGKVFIRCNNVLYIS 47
>UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=4; Saccharomycetaceae|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 188 IXLWEQTEEYV--NGQLKNKYG-DAFIRGNNVLYISTQR 295
+ L TE Y N +L NK+ D F+RG V+YIS Q+
Sbjct: 84 VALSSATEHYESNNNKLLNKFNSDVFLRGTQVMYISEQK 122
>UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotein
F; n=13; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein F - Caenorhabditis elegans
Length = 85
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 209 EEYVNGQLKNKYGDAFIRGNNVLYI 283
EEY++G + G+ IR NNVLY+
Sbjct: 50 EEYIDGNSQGNLGEILIRCNNVLYV 74
>UniRef50_A5WF65 Cluster: Putative uncharacterized protein; n=1;
Psychrobacter sp. PRwf-1|Rep: Putative uncharacterized
protein - Psychrobacter sp. PRwf-1
Length = 2329
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 91 QQIHGRPVVVKLNSGVDYRGVLACLEWEYIXNYXPLGTDRGICKRTA 231
+Q + NSG ++ ++ E+E N PL TD+G TA
Sbjct: 404 EQFESLQIAAPANSGTNFDVFMSVTEYEVDENNTPLSTDKGFVTTTA 450
>UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;
Fungi/Metazoa group|Rep: Small nuclear ribonucleoprotein
F - Drosophila melanogaster (Fruit fly)
Length = 88
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 206 TEEYVNGQLKNKYGDAFIRGNNVLYI 283
TEE + G + G+ IR NNVLYI
Sbjct: 49 TEEVIEGSVTGNLGEVLIRCNNVLYI 74
>UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep:
ACR204Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 85
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 85 FIQQIHGRPVVVKLNSGVDYRGVLACLE 168
F+ I G+PV VKL+SG+ Y+G L ++
Sbjct: 16 FLSNIIGKPVNVKLHSGMLYQGTLESID 43
>UniRef50_Q758M9 Cluster: AEL274Cp; n=1; Eremothecium gossypii|Rep:
AEL274Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 86
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 203 QTEEYVNGQLKNKYGDAFIRGNNVLYISTQRRR 301
+ EE++ K GD FIR NNVL+I R
Sbjct: 49 EAEEFIGDVSKGMVGDLFIRCNNVLWIGEDLTR 81
>UniRef50_P54999 Cluster: Small nuclear ribonucleoprotein F; n=11;
Eukaryota|Rep: Small nuclear ribonucleoprotein F -
Saccharomyces cerevisiae (Baker's yeast)
Length = 86
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 203 QTEEYVNGQLKNKYGDAFIRGNNVLYI 283
+ EE+V G G+ FIR NNVLYI
Sbjct: 55 EAEEFVAGVSHGTLGEIFIRCNNVLYI 81
>UniRef50_A5ZIH4 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides caccae ATCC 43185
Length = 1686
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 209 EEYVNGQLKNKYGDAFIRGNNVL 277
E Y N + KN YG+A + GN+VL
Sbjct: 688 ETYKNAEFKNSYGEACLIGNSVL 710
>UniRef50_A6S0C4 Cluster: Predicted protein; n=2; Ascomycota|Rep:
Predicted protein - Botryotinia fuckeliana B05.10
Length = 91
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 209 EEYVNGQLKNKYGDAFIRGNNVLYIS 286
EE+++ ++ + G IR NNVLYIS
Sbjct: 51 EEWIDSEMTSTLGQVLIRCNNVLYIS 76
>UniRef50_Q38674 Cluster: Superinfection exclusion protein A; n=2;
Enterobacteria phage P22|Rep: Superinfection exclusion
protein A - Bacteriophage P22
Length = 164
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 319 VFSKLNSSPLXTYIQNIIPTYECIAIFIFQLSVYIFLGLFPKXYN 185
+F +N P+ ++ I+ IAIFIF + + I G +P N
Sbjct: 109 IFGFMNIEPVVLWVPMILQLLLSIAIFIFSVFIKIVFGRYPGEAN 153
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 200 EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQR 295
+ E +NG+ K Y +RG+NV+++S +
Sbjct: 48 QNASEIINGENKGVYDRVLVRGDNVIFVSPSK 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,156,834
Number of Sequences: 1657284
Number of extensions: 5219312
Number of successful extensions: 10365
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10363
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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