BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_N15
(355 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep: CG90... 44 0.001
UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1; ... 33 1.1
UniRef50_Q0UB24 Cluster: Putative uncharacterized protein; n=1; ... 31 5.7
UniRef50_O29373 Cluster: Ribose ABC transporter, permease protei... 31 5.7
UniRef50_Q06I85 Cluster: Fasciclin-like protein FLA21; n=1; Trit... 31 7.5
UniRef50_UPI0000499375 Cluster: hypothetical protein 323.t00008;... 30 9.9
UniRef50_Q6MF99 Cluster: Putative uncharacterized protein; n=1; ... 30 9.9
UniRef50_A1ZPK2 Cluster: Putative uncharacterized protein; n=1; ... 30 9.9
UniRef50_A0PJX8 Cluster: Transmembrane protein 82; n=19; Tetrapo... 30 9.9
>UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep:
CG9034-PA - Drosophila melanogaster (Fruit fly)
Length = 77
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2
Query: 155 NYVKNDGDNRRYKGTYVVMRPDDPRVKLIRKE 250
NY DGDNRRYK YVV R DDPR +R +
Sbjct: 43 NYYAKDGDNRRYKLGYVVYRHDDPRALKVRND 74
>UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 418
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 145 WSIQLREERWRQ*KVQGYLCGDEAGRPKSEAYTQGVNLKLNILPVLFV 288
W+I E W + KV + GDE GR EAY Q LKL LF+
Sbjct: 34 WTINFDYEAWAKDKV--FHVGDELGRDAEEAYIQRTPLKLQ-FETLFI 78
>UniRef50_Q0UB24 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 750
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 146 QEHPDQYQQDLSLLRQKFXGSXFXT--LLNXLSKRFDXKPQPLRDAWRPD 3
+E P QY+ D + + S T LL + D +PQPL A RPD
Sbjct: 118 EEIPRQYRFDPCIFKSTLESSKTATRYLLPSKNGDIDARPQPLHKALRPD 167
>UniRef50_O29373 Cluster: Ribose ABC transporter, permease protein;
n=2; cellular organisms|Rep: Ribose ABC transporter,
permease protein - Archaeoglobus fulgidus
Length = 310
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 313 ILHNIWI*EQTTQAIYLVSGL-LLAYKLHSWVVRPHHHIGTLVPSIVSIVL 164
++ + W+ ++ YL GL +L++KL + + +H+ +VP +V+IV+
Sbjct: 232 VIFSGWMPQRAVFGAYLFGGLDVLSFKLQATGIEVSYHLMKMVPYVVTIVV 282
>UniRef50_Q06I85 Cluster: Fasciclin-like protein FLA21; n=1;
Triticum aestivum|Rep: Fasciclin-like protein FLA21 -
Triticum aestivum (Wheat)
Length = 277
Score = 30.7 bits (66), Expect = 7.5
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 316 PILHNIWI*EQTTQAIYLVSGLLLAY--KLHSWVVRPHHHIGTL 191
P HN+ EQ A+ L GL +AY +L SWV R H TL
Sbjct: 111 PRFHNLTADEQV--AVLLYHGLTMAYSEELLSWVTRVHGEFSTL 152
>UniRef50_UPI0000499375 Cluster: hypothetical protein 323.t00008;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 323.t00008 - Entamoeba histolytica HM-1:IMSS
Length = 569
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 103 LNRLRSCWYWSG-CSWSIQLREERWRQ*KVQGYLCGDEAGRPKSEAYTQGVNLKLNILPV 279
LN C WS C SI+ EE+W K + CG ++ P+ + + ++ + ++L V
Sbjct: 150 LNLFSLCNVWSTECDMSIESLEEQWCYRKARRIACGIDSDIPRFKQHMNQLS-QPSLLRV 208
Query: 280 LFVLRSKYYVI*VC 321
+ V K + +C
Sbjct: 209 INVCLKKPQIEIIC 222
>UniRef50_Q6MF99 Cluster: Putative uncharacterized protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 1511
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 187 VQGYLCGDEAGRPKSEAYTQGVNLKLNI 270
+ G+L G E R K E YTQG+N NI
Sbjct: 36 ISGHLEGTEPSRNKHEFYTQGINRVNNI 63
>UniRef50_A1ZPK2 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 1649
Score = 30.3 bits (65), Expect = 9.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 1 KSGLQASLNGCGFXSNRLDSXFNRVWNXL 87
KSGL+ +L G G+ S +D ++W L
Sbjct: 1618 KSGLKDALKGAGYASKEVDKVVKKLWKSL 1646
>UniRef50_A0PJX8 Cluster: Transmembrane protein 82; n=19;
Tetrapoda|Rep: Transmembrane protein 82 - Homo sapiens
(Human)
Length = 344
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 236 ASLLGRPASSPHRYPCTFYCLHRSSRNC 153
A+LLG A HR+ C Y LH S R C
Sbjct: 160 ATLLGLGARRLHRHVCRLYELHSSQRYC 187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,676,589
Number of Sequences: 1657284
Number of extensions: 4993412
Number of successful extensions: 12049
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12049
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -