Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_N14
         (353 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63...    75   1e-14
08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161...    75   2e-14
02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378...    74   4e-14
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438...    26   9.8  

>02_01_0089 +
           633642-633644,633728-633863,635356-635457,635565-635608
          Length = 94

 Score = 75.4 bits (177), Expect = 1e-14
 Identities = 33/74 (44%), Positives = 46/74 (62%)
 Frame = +1

Query: 13  VLCGLSSSHXQKSKCAQCGXPAAKLRSYHWSVKAKXXXXXXXXXMRHLKIVRRRFRNGFK 192
           V CG  S H QKS C+ CG PAA++R Y+WSVKA          MR+++ V RRF++ F+
Sbjct: 20  VRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFR 79

Query: 193 EGKPTPPKKAVASS 234
           EG    P+K  A++
Sbjct: 80  EGTEATPRKRAAAA 93


>08_01_0195 +
           1612938-1613003,1613026-1613161,1614624-1614725,
           1614833-1614876
          Length = 115

 Score = 74.5 bits (175), Expect = 2e-14
 Identities = 33/72 (45%), Positives = 44/72 (61%)
 Frame = +1

Query: 13  VLCGLSSSHXQKSKCAQCGXPAAKLRSYHWSVKAKXXXXXXXXXMRHLKIVRRRFRNGFK 192
           V CG  S H QKS C+ CG PAA++R Y+WSVKA          MR+++ V RRF++ F+
Sbjct: 41  VRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFR 100

Query: 193 EGKPTPPKKAVA 228
           EG    P+K  A
Sbjct: 101 EGTEATPRKRAA 112


>02_05_1204 +
           34936696-34936698,34936809-34936944,34937794-34937895,
           34938153-34938199
          Length = 95

 Score = 73.7 bits (173), Expect = 4e-14
 Identities = 33/74 (44%), Positives = 46/74 (62%)
 Frame = +1

Query: 13  VLCGLSSSHXQKSKCAQCGXPAAKLRSYHWSVKAKXXXXXXXXXMRHLKIVRRRFRNGFK 192
           V CG  S H QKS C+ CG PAA++R Y+WSVKA          MR+L+ V +RF++ F+
Sbjct: 20  VRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYLRHVPKRFKSNFR 79

Query: 193 EGKPTPPKKAVASS 234
           EG    P+K  A++
Sbjct: 80  EGTEAAPRKKGAAA 93


>02_05_1298 -
           35542250-35542831,35543218-35543410,35543511-35543827,
           35544144-35544186,35545845-35545900,35546028-35546102,
           35546249-35546345,35546422-35546546,35547063-35547167,
           35547295-35547432,35547758-35547831,35547995-35548065,
           35548168-35548363,35548482-35548572,35549264-35549342,
           35549431-35549491,35549745-35549814,35549913-35549987,
           35550119-35550194,35550403-35550489,35550744-35550880,
           35551000-35551063,35551351-35551415
          Length = 958

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +3

Query: 9   CSPLWSLVISXSKIKMRP--MWXSCSKITLLPL 101
           CS L SL++S +KIK  P  ++ S + ++LL L
Sbjct: 424 CSSLQSLILSNNKIKRWPGTVFSSLASLSLLKL 456


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,707,307
Number of Sequences: 37544
Number of extensions: 100137
Number of successful extensions: 190
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)