Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_N14
         (353 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    71   2e-13
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    64   2e-11
AL032641-4|CAA21647.1|  454|Caenorhabditis elegans Hypothetical ...    26   8.7  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 70.9 bits (166), Expect = 2e-13
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = +1

Query: 19  CGLSSSHXQKSKCAQCGXPAAKLRSYHWSVKAKXXXXXXXXXMRHLKIVRRRFRNGFKEG 198
           CG SS H QK +CA CG P AK R+Y+W  K+           RHL+ V  RFRNGF+EG
Sbjct: 22  CGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFREG 81

Query: 199 KPTPPK 216
               P+
Sbjct: 82  TTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 29/64 (45%), Positives = 35/64 (54%)
 Frame = +1

Query: 19  CGLSSSHXQKSKCAQCGXPAAKLRSYHWSVKAKXXXXXXXXXMRHLKIVRRRFRNGFKEG 198
           CG SS H QK +CA CG   AK R+Y+W  K+           RHL+ V  RFRNGF+  
Sbjct: 22  CGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGT 81

Query: 199 KPTP 210
            P P
Sbjct: 82  TPKP 85


>AL032641-4|CAA21647.1|  454|Caenorhabditis elegans Hypothetical
           protein Y5F2A.4 protein.
          Length = 454

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 5   FLQSSVVSRHLTFKNQNAPNV 67
           F+Q S ++RH++ K+ NAP V
Sbjct: 80  FVQKSHLTRHVSRKHSNAPGV 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,428,331
Number of Sequences: 27780
Number of extensions: 78962
Number of successful extensions: 115
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)