Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_N13
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian... 106 2e-23
U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian... 106 2e-23
AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 32 0.42
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 32 0.42
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 32 0.42
Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.74
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 29 3.9
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 29 3.9
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 28 5.2
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 6.9
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 27 9.1
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 27 9.1
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 27 9.1
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 27 9.1
>U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform b
protein.
Length = 183
Score = 106 bits (254), Expect = 2e-23
Identities = 54/114 (47%), Positives = 72/114 (63%)
Frame = +3
Query: 207 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 386
D+TV EL+KYDG + + +L +NG I+DVTRGK FYGPG Y AG DATR L T
Sbjct: 49 DMTVEELRKYDGVKNE-HILFGLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQ 107
Query: 387 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDES 548
A + E+DD + + +DE +A EWE QF+ KY VGRL+K +Y + +S
Sbjct: 108 NA-VSSEWDDHTGISADEQETANEWETQFKFKYLTVGRLVKNSSEKADYGNRKS 160
>U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform a
protein.
Length = 198
Score = 106 bits (254), Expect = 2e-23
Identities = 54/114 (47%), Positives = 72/114 (63%)
Frame = +3
Query: 207 DLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV 386
D+TV EL+KYDG + + +L +NG I+DVTRGK FYGPG Y AG DATR L T
Sbjct: 64 DMTVEELRKYDGVKNE-HILFGLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQ 122
Query: 387 AASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDES 548
A + E+DD + + +DE +A EWE QF+ KY VGRL+K +Y + +S
Sbjct: 123 NA-VSSEWDDHTGISADEQETANEWETQFKFKYLTVGRLVKNSSEKADYGNRKS 175
>AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical
protein H38K22.3 protein.
Length = 326
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = +3
Query: 213 TVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAA 392
T +L +DGT+ + LA+ G +++V K +YGPG Y FAG+DATR TG
Sbjct: 102 TPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDF-- 159
Query: 393 SENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVG 497
E+ L DE+ S ++W + ++Y +VG
Sbjct: 160 QESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVG 194
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 575
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 576 SW 581
W
Sbjct: 230 IW 231
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 575
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 576 SW 581
W
Sbjct: 230 IW 231
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 575
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 576 SW 581
W
Sbjct: 230 IW 231
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 575
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 576 SW 581
W
Sbjct: 230 IW 231
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 366 GLATGQVAASENDEYDDVSDLGSDE--IASAKEWEEQFREKYDIVGRLLKLG 515
G G+ A + ++ DDV ++ SDE ++ ++ EE+ E+ +I G+ K+G
Sbjct: 218 GEGKGKAAGEDEEDDDDVEEIPSDEEILSDFEDDEEEPAEELEIPGKSRKIG 269
>Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical
protein F57B1.7 protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1
Query: 478 SLNCSSHSLAEAISSEPRSLTSSYSSFSDAATCPVAKPLVASLP 347
SLN + L +I++ P+ L SS +S SDA++C + P S+P
Sbjct: 35 SLNALNSLLYGSINTSPQPLLSSPTS-SDASSCSPSMPFTPSIP 77
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 384 VAASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDESEDKKS 563
VA+ ++ E +D + S EIA A+ + F + D++ + + K S+DE ED++
Sbjct: 946 VASEDDGEEEDPAAFSSKEIAEAEVRDSLFSQLQDVI---TEQHDNIKGTSEDEVEDRED 1002
Query: 564 Q 566
+
Sbjct: 1003 E 1003
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 384 VAASENDEYDDVSDLGSDEIASAKEWEEQFREKY 485
+A E + +D+SD+ D+ +A+E E+ RE+Y
Sbjct: 267 LADEEEENSNDISDIDDDDGITAEEQREEERERY 300
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 291 DVTRGKRFYGPGGPYSA--FAGKDATRGLATGQVAASENDEYDDVSDLG 431
D R KR Y P GPY + T AT AA + YD V+D G
Sbjct: 72 DNDREKRSYEPEGPYQSETTTPSTTTSTAATTTEAAEDESGYDFVNDNG 120
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +3
Query: 306 KRFYGPG---GPYSAFAGK-DATRGLATGQVAASENDEYDDVSDLGSDEIASAKEWEEQF 473
KR+ G G SAF K D + E +E DD + +E ASA+ E
Sbjct: 129 KRYGGAGVGKSLLSAFLAKGDVSDDSEDEDEDEEEAEEQDDTEEKKENEDASAEVVIENA 188
Query: 474 REKYDIVGRLLKLGETPKNYSDDESEDKKSQ 566
+K + G K G+ S +SE KKS+
Sbjct: 189 EDKEEEEGSPKKKGQKRCQKSPIQSEAKKSK 219
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +3
Query: 306 KRFYGPG---GPYSAFAGK-DATRGLATGQVAASENDEYDDVSDLGSDEIASAKEWEEQF 473
KR+ G G SAF K D + E +E DD + +E ASA+ E
Sbjct: 151 KRYGGAGVGKSLLSAFLAKGDVSDDSEDEDEDEEEAEEQDDTEEKKENEDASAEVVIENA 210
Query: 474 REKYDIVGRLLKLGETPKNYSDDESEDKKSQ 566
+K + G K G+ S +SE KKS+
Sbjct: 211 EDKEEEEGSPKKKGQKRCQKSPIQSEAKKSK 241
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 399 NDEYDDVSDLGSDEIASAKEWEEQFREKYDI 491
+D DDV D ASAK+W F +K ++
Sbjct: 969 DDTKDDVISFRVDNSASAKKWSAAFADKLEL 999
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 453 KEWEEQFREKYDIVGRLLKLGETPKNYSDDESEDKKS 563
K +E+Q D+V RLL L +T YSD ++KKS
Sbjct: 1348 KMYEKQMAMFTDVVNRLLAL-DTISKYSDALCDEKKS 1383
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical
protein F10B5.4 protein.
Length = 426
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 486 DIVGRLLKLGETPKNYSDDESEDKKSQ*ANSW 581
DI +L K+ T SDDE EDK+S + W
Sbjct: 112 DINAKLSKVNLTSCVVSDDEDEDKRSYADSPW 143
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +3
Query: 411 DDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDESEDK 557
+D + ++ + + + E R VGR++++G+ NY D+E+ ++
Sbjct: 205 EDARFVEEKDVKTLQNFVENVRNNVIGVGRVVEIGKDSDNYGDNENTNE 253
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 353 FTSKRRVWASRSIKSLASSNIKYNSIHSQKNSSVRLSS 240
F + ++ WA S + + S + YN +++Q +S +LS+
Sbjct: 768 FVNAKKTWALTSEQGIESLHSWYNKLNAQIRTSAKLST 805
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 486 DIVGRLLKLGETPKNYSDDESEDKKSQ*ANSW 581
DI +L K+ T SDDE EDK+S + W
Sbjct: 112 DINAKLSKVNLTSCVVSDDEDEDKRSYADSPW 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,487,463
Number of Sequences: 27780
Number of extensions: 251194
Number of successful extensions: 849
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -