Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_N12
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537409-1|CAD97651.1| 776|Homo sapiens hypothetical protein pr... 102 1e-21
BC125120-1|AAI25121.1| 776|Homo sapiens cullin 1 protein. 102 1e-21
BC125119-1|AAI25120.1| 776|Homo sapiens cullin 1 protein. 102 1e-21
AF062536-1|AAC36681.1| 776|Homo sapiens cullin 1 protein. 102 1e-21
AC005229-1|AAM49153.1| 263|Homo sapiens cullin 1 protein. 102 1e-21
U58087-1|AAC50544.1| 752|Homo sapiens Hs-CUL-1 protein. 77 8e-21
U83410-1|AAC51190.1| 745|Homo sapiens CUL-2 protein. 30 9.9
BC110901-1|AAI10902.1| 745|Homo sapiens CUL2 protein protein. 30 9.9
BC009591-1|AAH09591.1| 745|Homo sapiens cullin 2 protein. 30 9.9
AL392046-4|CAI13165.1| 216|Homo sapiens cullin 2 protein. 30 9.9
AL392046-3|CAI13164.1| 706|Homo sapiens cullin 2 protein. 30 9.9
AL392046-2|CAI13163.1| 745|Homo sapiens cullin 2 protein. 30 9.9
AF126404-1|AAD23581.1| 745|Homo sapiens cullin 2 protein. 30 9.9
>BX537409-1|CAD97651.1| 776|Homo sapiens hypothetical protein
protein.
Length = 776
Score = 102 bits (245), Expect = 1e-21
Identities = 56/124 (45%), Positives = 70/124 (56%)
Frame = +2
Query: 365 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 544
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 545 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKEFLRIYLINLLXNGAD 724
+ + VP + ELYKRLKEFL+ YL NLL +G D
Sbjct: 60 NQARGAGVPPSK----------SKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 725 LMGE 736
LM E
Sbjct: 110 LMDE 113
>BC125120-1|AAI25121.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 102 bits (245), Expect = 1e-21
Identities = 56/124 (45%), Positives = 70/124 (56%)
Frame = +2
Query: 365 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 544
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 545 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKEFLRIYLINLLXNGAD 724
+ + VP + ELYKRLKEFL+ YL NLL +G D
Sbjct: 60 NQARGAGVPPSK----------SKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 725 LMGE 736
LM E
Sbjct: 110 LMDE 113
>BC125119-1|AAI25120.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 102 bits (245), Expect = 1e-21
Identities = 56/124 (45%), Positives = 70/124 (56%)
Frame = +2
Query: 365 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 544
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 545 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKEFLRIYLINLLXNGAD 724
+ + VP + ELYKRLKEFL+ YL NLL +G D
Sbjct: 60 NQARGAGVPPSK----------SKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 725 LMGE 736
LM E
Sbjct: 110 LMDE 113
>AF062536-1|AAC36681.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 102 bits (245), Expect = 1e-21
Identities = 56/124 (45%), Positives = 70/124 (56%)
Frame = +2
Query: 365 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 544
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 545 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKEFLRIYLINLLXNGAD 724
+ + VP + ELYKRLKEFL+ YL NLL +G D
Sbjct: 60 NQARGAGVPPSK----------SKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 725 LMGE 736
LM E
Sbjct: 110 LMDE 113
>AC005229-1|AAM49153.1| 263|Homo sapiens cullin 1 protein.
Length = 263
Score = 102 bits (245), Expect = 1e-21
Identities = 56/124 (45%), Positives = 70/124 (56%)
Frame = +2
Query: 365 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 544
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 545 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKEFLRIYLINLLXNGAD 724
+ + VP + ELYKRLKEFL+ YL NLL +G D
Sbjct: 60 NQARGAGVPPSK----------SKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 725 LMGE 736
LM E
Sbjct: 110 LMDE 113
>U58087-1|AAC50544.1| 752|Homo sapiens Hs-CUL-1 protein.
Length = 752
Score = 77.4 bits (182), Expect(2) = 8e-21
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +2
Query: 365 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVH 538
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVH 57
Score = 43.2 bits (97), Expect(2) = 8e-21
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 656 ELYKRLKEFLRIYLINLLXNGADLMGE 736
ELYKRLKEFL+ YL NLL +G DLM E
Sbjct: 63 ELYKRLKEFLKNYLTNLLKDGEDLMDE 89
>U83410-1|AAC51190.1| 745|Homo sapiens CUL-2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>BC110901-1|AAI10902.1| 745|Homo sapiens CUL2 protein protein.
Length = 745
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>BC009591-1|AAH09591.1| 745|Homo sapiens cullin 2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AL392046-4|CAI13165.1| 216|Homo sapiens cullin 2 protein.
Length = 216
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AL392046-3|CAI13164.1| 706|Homo sapiens cullin 2 protein.
Length = 706
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AL392046-2|CAI13163.1| 745|Homo sapiens cullin 2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
>AF126404-1|AAD23581.1| 745|Homo sapiens cullin 2 protein.
Length = 745
Score = 29.9 bits (64), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 404 RQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTS 532
R DFD+ W L I+ V +Y+ + + D ++ +Y C +
Sbjct: 6 RVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVA 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,842,166
Number of Sequences: 237096
Number of extensions: 1770980
Number of successful extensions: 3061
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3061
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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