Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_N09
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 77 2e-14
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 72 4e-13
11_01_0767 + 6438648-6438809,6439146-6440000 69 5e-12
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 67 1e-11
11_02_0012 - 7346282-7347136,7347234-7347593 65 5e-11
11_02_0011 - 7337618-7338496,7338596-7338991 63 3e-10
11_02_0014 - 7352619-7352918,7353173-7353418 60 2e-09
11_01_0750 - 6315126-6315896,6316371-6316784 58 6e-09
04_04_0619 + 26652923-26653267,26653440-26654273 58 1e-08
11_01_0771 + 6453130-6454488 56 3e-08
01_01_1152 + 9170628-9171899 55 5e-08
05_06_0044 - 25150322-25151260 46 2e-05
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 2.2
02_01_0384 - 2781362-2782299,2782320-2782428 30 2.2
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 2.9
05_05_0373 - 24478361-24479383 29 3.9
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 5.1
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 6.8
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 28 9.0
01_06_0373 - 28841462-28842850 28 9.0
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +3
Query: 435 FNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 611
+ ++ + + F K A + IN+W E T RIKD + D++ AT AVL NA+YFKG W
Sbjct: 125 YRAEARPVSFRDKLEEARREINEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDW 184
Query: 612 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKY 716
SKFD R TSD FY+ + P M G ++Y
Sbjct: 185 ESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQY 218
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +3
Query: 468 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDR 647
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 648 DFYVSKDKTIKVPMM 692
+F++ K+++ P M
Sbjct: 269 EFHLLDGKSVQAPFM 283
Score = 68.1 bits (159), Expect = 7e-12
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +3
Query: 492 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 671
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++ +
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 672 TIKVPMMYKR 701
+++ P M R
Sbjct: 529 SVQAPFMSTR 538
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +3
Query: 435 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 611
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 612 SSKFDERLTSDRDFYVSKDKTIKVPMMYK-RGDYKY 716
+ FD+ T++R+F +++VP M + G Y +
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHH 137
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +3
Query: 483 AKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVS 662
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 663 KDKTIKVPMM 692
K++ P M
Sbjct: 66 DGKSVLAPFM 75
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 459 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERL 635
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYFKG WS+ F
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRER 175
Query: 636 TSDRDFYVSKDKTIKVPMMYKRGDYKYG 719
T+ F+ ++ P M R D G
Sbjct: 176 TTTGKFHRLDGSSVDAPFMSSREDQYIG 203
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/78 (41%), Positives = 42/78 (53%)
Frame = +3
Query: 486 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 665
K IN WV + TN I +++ S+ TA VLVNAIYFKG WS+ F T+ F+
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLD 197
Query: 666 DKTIKVPMMYKRGDYKYG 719
++ VP M R D G
Sbjct: 198 GSSVDVPFMSSREDQYIG 215
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/78 (38%), Positives = 40/78 (51%)
Frame = +3
Query: 486 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 665
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 666 DKTIKVPMMYKRGDYKYG 719
++ V M R D G
Sbjct: 148 GSSVNVRFMRSREDQYIG 165
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 426 GXVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFK 602
G V+ S + DF +K A IN WV+++T + L+ ++ T VL +A+YF+
Sbjct: 123 GNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFR 182
Query: 603 GAWSSKFDERLTSDRDFYVSKDKTIKVPMM 692
G W + D R T+++ FY +++VP +
Sbjct: 183 GRWLDRDDLRRTTEQKFYCLDGTSVEVPFV 212
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 450 QNIDFSKNT-VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFD 626
+++DF AA +N ++ + TN R+ + ++P + S+T VL NA++FK W KF+
Sbjct: 108 RSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFE 167
Query: 627 ERLTSDRDFYVSKDKTIKVPMM 692
T R F+ + VP +
Sbjct: 168 SYDTQRRRFHRQDGTRVTVPFL 189
>11_01_0771 + 6453130-6454488
Length = 452
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +3
Query: 480 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 656
A K IN W T I D++ P S+ TA VL NAIYFKG W F+E T + FY
Sbjct: 173 ARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
>01_01_1152 + 9170628-9171899
Length = 423
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 480 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 659
A + +N +V + T I+D++ P+S+ S+T VL NA++FKG WS F T F++
Sbjct: 159 ARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
Query: 660 SKDKTIKVPMM 692
++ P M
Sbjct: 219 LDGGAVRAPFM 229
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 173 QGKSIVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 286
QG++ ++S S LA +A + GET ELL +G P
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSP 94
>05_06_0044 - 25150322-25151260
Length = 312
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Frame = +3
Query: 471 NTVAAKS-INDWVEENTNNRIKDLVN------PDSLSSATAAV-----LVNAIYFKGAWS 614
N AA++ IN+W T +KD+++ D A+ L N++YF W
Sbjct: 32 NPAAARAEINEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWD 91
Query: 615 SKFDERLTSDRDFYVSKDKTIKVPMM 692
F LT + DF+VS D ++VP M
Sbjct: 92 HPFFPHLTEEGDFHVSPDHDVRVPFM 117
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 370 VRHFKLNAFN*SKVTAFTREFCSYSIVVREADSFQKLFMGFTIRS 236
VRH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 357 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTMLX 178
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRRPRRG 268
Query: 177 P 175
P
Sbjct: 269 P 269
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 287 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 412
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 477 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 584
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 305 TEFASKSRDLRSIKGVELKMANKVYVHDG 391
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 345 LIDRRSRLLLANSVRIASSSGK 280
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>03_05_0725 +
27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 500 IVNRLSCDCILREINILDVRIEDVPWKRLQNSRLVFH 390
+V L+ D ILREIN+ V++E + W +N + H
Sbjct: 546 LVKLLTADRILREINL--VKLESLLWHNDENINKITH 580
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 188 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 331
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,161,644
Number of Sequences: 37544
Number of extensions: 356107
Number of successful extensions: 1033
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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