Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_N02
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.38 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.2  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 766 CVPGQHFNGRCXYSCFWPQSVD 701
           C+ G  +N R  +SC WP++VD
Sbjct: 128 CIGGLLYNERT-HSCDWPENVD 148


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +2

Query: 542 LKNSNH----AHILNLSPPLNMNPYWFSIHVAYTM 634
           LKN+N+     H++  S PL  +PY+  + V  T+
Sbjct: 404 LKNANNNELPEHVIMWSSPLTESPYFEKLDVKVTV 438


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 330 NAFPPRASISSAAV*IVPGSLG 265
           +AF P+  + + AV  +PG +G
Sbjct: 162 DAFAPKGYLLTVAVNSIPGEVG 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,906
Number of Sequences: 336
Number of extensions: 3618
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)