Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_M22
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 39 0.003
SB_5525| Best HMM Match : zf-C3HC4 (HMM E-Value=6.2e-12) 37 0.014
SB_46496| Best HMM Match : Tropomyosin (HMM E-Value=0.021) 33 0.22
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 31 0.51
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 31 0.68
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 31 0.90
SB_31447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_1006| Best HMM Match : GPP34 (HMM E-Value=3.6) 30 1.6
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 29 2.1
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 29 2.7
SB_24377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 3.6
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 3.6
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 28 4.8
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 28 4.8
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 28 4.8
SB_26026| Best HMM Match : Vicilin_N (HMM E-Value=0.23) 28 4.8
SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25) 28 6.3
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 28 6.3
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 28 6.3
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 28 6.3
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 27 8.4
SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12) 27 8.4
SB_16002| Best HMM Match : Clathrin (HMM E-Value=1.1) 27 8.4
SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25) 27 8.4
SB_48463| Best HMM Match : Extensin_2 (HMM E-Value=0.075) 27 8.4
SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25) 27 8.4
SB_27136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = +1
Query: 298 SLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQT 477
S T T+ LQ ++ KPR S T S +N++ Q + R S T + Q
Sbjct: 345 SRKTKTSKLQDQDKQAAKPRQASRKTKTSKLQNQNKQAA--IPRQA-SRKTKTSKPQDQD 401
Query: 478 KDEQDKSIDEETVIEPKTRARKKASDPTE 564
K EQDK D+E P+ +RK + PT+
Sbjct: 402 KQEQDKQ-DQEKQARPRQASRKSKARPTQ 429
>SB_5525| Best HMM Match : zf-C3HC4 (HMM E-Value=6.2e-12)
Length = 389
Score = 36.7 bits (81), Expect = 0.014
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 256 NDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTG 435
+DCDSCSE +E+ L+T TN+ S G SSVT ++ + + VGR
Sbjct: 14 SDCDSCSEYDYDENELSTGTNSTGRPSS----QAGSSSVTSPPYRSSESSPYRGPVGRVA 69
Query: 436 ISPNTHSIMKTKQTKDEQDKSIDEETVI-EPKTRARKKAS 552
SP S+ D + E I PK R+ +S
Sbjct: 70 -SPKQGSMGSESIENDSSTCVVTVELEIPSPKQRSMNDSS 108
>SB_46496| Best HMM Match : Tropomyosin (HMM E-Value=0.021)
Length = 431
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/93 (26%), Positives = 41/93 (44%)
Frame = +1
Query: 286 IEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMK 465
I E SLN + +L I E +T RS N +N+ N+ + N S+
Sbjct: 321 INERSLNINERSLDITERSLNITERSLDITERSLN---NNERSLNINERSLDINERSLNI 377
Query: 466 TKQTKDEQDKSIDEETVIEPKTRARKKASDPTE 564
+++ D DKS+D + E +++ D TE
Sbjct: 378 NERSLDITDKSLD---ITERSLNITERSLDITE 407
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 31.5 bits (68), Expect = 0.51
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Frame = +1
Query: 277 EEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRST-NKNKDNQHLPNVGRTGISPNTH 453
E+ I+EH T ++N++ GK+K R +T NKNK+++ G
Sbjct: 597 EDKIDEHREGT-SDNIK-SNHGKEKDRAQLDLTGNDNKNKNKESKKYDEQG----DSRPV 650
Query: 454 SIMKTKQTKDEQDKSIDEETVIEPKTRARKK--ASDPTED 567
S M K Q K+ DEE IE +T A K ASD T +
Sbjct: 651 SDMSNKDRHQNQKKTGDEE--IEDETDASDKGGASDQTNN 688
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 31.1 bits (67), Expect = 0.68
Identities = 19/99 (19%), Positives = 48/99 (48%)
Frame = +1
Query: 250 IENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGR 429
+E D + + ++E + N++++ G+ R S RST KNK ++ +
Sbjct: 645 VELDGNIELDGIVELDGIVELDGNVELDGIGEMSSRQSSQSRGRSTEKNKKRRYSESSSD 704
Query: 430 TGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKK 546
+ S ++ +TK+ K + + +++ ++P + +K+
Sbjct: 705 SFSSSSSEDRRRTKKKKLSKHRKNNKDLELQPIKKVKKR 743
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 30.7 bits (66), Expect = 0.90
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 328 IEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDKSID- 504
+ ++GK K + S RS + N+H+ NV + N K K + +S D
Sbjct: 369 VNQTGKDKDKDAESNDFRSEVEQAHNRHVSNVVHLVPTVNQTGKDKDKDAESNDFRSEDP 428
Query: 505 -EETVIEPKTRARKKASD 555
+E+ + P +AR +D
Sbjct: 429 RKESTLAPPRKARTGVND 446
>SB_31447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +1
Query: 316 NNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDK 495
N+ ++E K+ +++V R+ + K + R S T + T ++ D+ +
Sbjct: 140 NDDKVESVSNKEEEELATVETRAQKRKKKKKSETVPERAATSKTTTMTVSTIESHDQNVE 199
Query: 496 SIDEETVIEPKTRARKKASD 555
+ +IE + + RK+ +D
Sbjct: 200 EDESGIIIETRAQKRKREND 219
>SB_1006| Best HMM Match : GPP34 (HMM E-Value=3.6)
Length = 426
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +1
Query: 253 ENDCDSCSEEVIEEHSLNTDTNNLQIE--ESGKKKPRGISSVTLRSTNKNKDNQHLPNVG 426
END C+EE+ EE +T+ + E + G + +G + N+ + P+
Sbjct: 318 ENDVTECNEELPEEGKPDTEKEEEKDEKKDDGSTEHKGNPEKAVEECNEELTEEAKPDTE 377
Query: 427 RTGISPNTHSIMKTKQTKDEQDKSIDEETV 516
R K + T DE +EE +
Sbjct: 378 REEKKNKNEDDKKEEGTLDESAVEQEEENL 407
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/86 (19%), Positives = 33/86 (38%)
Frame = +1
Query: 307 TDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDE 486
T + + + P+ ++ + NK +T +P T S+ +T T
Sbjct: 303 TTASEINVASKTTAAPKTTTASEINVANKTTAAHETTVATKTTAAPETTSVPETTATNTA 362
Query: 487 QDKSIDEETVIEPKTRARKKASDPTE 564
DK+ +T P+T K + T+
Sbjct: 363 PDKTAVPKTTTAPETTDASKTTVETQ 388
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 466 TKQTKDEQDKSIDEETVIEPKTRARKKASDPTEDD 570
TK + E D S DEE V +PK A+K A++ + D
Sbjct: 36 TKGSSSEDDSSSDEEEV-KPKKDAKKAATEDSSSD 69
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 466 TKQTKDEQDKSIDEETVIEPKTRARKKASDPTEDD 570
TK + E D S DEE V +PK A+K A++ + D
Sbjct: 88 TKGSSSEDDSSSDEEEV-KPKKDAKKAATEDSSSD 121
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 247 KIENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVG 426
++E+ + EE++EEH L +T EE + +VT T+ N Q L
Sbjct: 266 ELESKHSAHVEEILEEHQLEIETIKADYEEQRSALETKLFAVTSECTSLNIKLQRLQEET 325
Query: 427 RTGISPNTH-SIMKTKQTKDE 486
I +I K K DE
Sbjct: 326 EQDIENRIQDAIEKYKSLPDE 346
>SB_24377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/80 (18%), Positives = 39/80 (48%)
Frame = +1
Query: 316 NNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDK 495
N+ ++E + +++V R+ + + ++ +P R S T + T ++ D+ +
Sbjct: 19 NDHKVESVRNTEEEELATVKTRAQKRKRKSETVPE--RAATSKTTTMTVSTIESHDQNVE 76
Query: 496 SIDEETVIEPKTRARKKASD 555
+ +IE + + RK+ +D
Sbjct: 77 EDESGIIIETRAQKRKREND 96
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 427 RTGISPNTHSIMKTKQTKDEQDKSIDEETVI--EPKTRARKKASDPTEDDKT 576
R+G + + K + K E+ + EE + EPK A KK + E DKT
Sbjct: 484 RSGSAAKKEDVKKDETKKSEKAEIKKEEIKVKEEPKDDAEKKEDEGKEPDKT 535
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Frame = +1
Query: 250 IENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDN--QHLPNV 423
+++ D+ +E+ E L NNL+ E S K I+ L + K++DN + N+
Sbjct: 1028 LKDRIDALEKEIKE---LKAQRNNLETELSNKSHKLAITEGQLANARKDRDNLKAEIDNL 1084
Query: 424 GRT------GISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASD 555
T + S+ + ++ + +DK + ++ I + R+ K +D
Sbjct: 1085 NITIRKMKEDLLAAQSSLKQKEREVETKDKELKDKDAIIERLRSAKAVTD 1134
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/83 (21%), Positives = 32/83 (38%)
Frame = +1
Query: 265 DSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISP 444
+S S+ ++S N+D +N + SS S N N DN + N +P
Sbjct: 62 NSTSDNSTSDNS-NSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNP 120
Query: 445 NTHSIMKTKQTKDEQDKSIDEET 513
+ + QD S +++
Sbjct: 121 ENSTSDNSNSNNSNQDNSNSDDS 143
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/86 (18%), Positives = 32/86 (37%)
Frame = +1
Query: 256 NDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTG 435
++ D+ S + + N+D +N S P +S S N N+DN + +
Sbjct: 88 SNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDN 147
Query: 436 ISPNTHSIMKTKQTKDEQDKSIDEET 513
+ N + + D S + +
Sbjct: 148 SNTNNSNSDNSNTDNSNSDNSTSDNS 173
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/95 (17%), Positives = 33/95 (34%)
Frame = +1
Query: 292 EHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTK 471
++S + D +N S +S S N N DN + N +P + +
Sbjct: 256 DNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSN 315
Query: 472 QTKDEQDKSIDEETVIEPKTRARKKASDPTEDDKT 576
QD S +++ + + + D+ T
Sbjct: 316 SNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNST 350
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/64 (21%), Positives = 25/64 (39%)
Frame = +1
Query: 385 TNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDPTE 564
T + + P T +P T S T +T+ + T P+T++ DP
Sbjct: 127 TPETQSTTETPETQSTTETPETQSTTDTPETQSPTQTPETQSTTTTPETQSTTDTRDPVN 186
Query: 565 DDKT 576
++ T
Sbjct: 187 NNDT 190
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 298 SLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQT 477
S T T+ LQ ++ +PR S T S +++D Q P S KTK +
Sbjct: 399 SCKTKTSKLQDQDKQAARPRQASLKTKASKPEDQDKQ--------AARPRQTS-SKTKTS 449
Query: 478 KDEQDKSIDEETVIEPKTRARKK 546
K+++ K +++ + K ARK+
Sbjct: 450 KNKRSKQQEKDKQEQDKQAARKR 472
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 6/108 (5%)
Frame = +1
Query: 265 DSCSEEVIEEHSLNTDTNNLQIEESGKKK------PRGISSVTLRSTNKNKDNQHLPNVG 426
D S+E E ++ + ++ KKK P + + T + K K +
Sbjct: 40 DIFSQEKSNEELPESEKKKKKKKKDKKKKTEEETVPETVQTETPSARKKKKKEKEQEETM 99
Query: 427 RTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDPTEDD 570
+ T S K K+ K E + ++E+ E + +KK S+ TED+
Sbjct: 100 EEQQTEATSSAKKKKKRKVEDVEDVEEKVEAETPKKKKKK-SETTEDE 146
>SB_26026| Best HMM Match : Vicilin_N (HMM E-Value=0.23)
Length = 396
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 247 KIENDC-DSCSEEVIEEHSLNTDTNNLQIEESGKK 348
+I+ C + C +VIE+ + N++ LQ++E+ +K
Sbjct: 102 RIQQRCQEQCEMDVIEDGTANSEDEGLQVDEAFRK 136
>SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)
Length = 626
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 451 HSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDPTEDDK 573
H +M +++ ++Q + E EP K AS+ EDD+
Sbjct: 543 HGLMGKERSFNQQIPVVMENNTFEPSMEEEKAASEEQEDDE 583
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +1
Query: 256 NDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTG 435
ND + + + ++ + T +L+++E G+S +L S + +K + V
Sbjct: 517 NDVEVVARRIEDKRNAVEITESLEVKEVQAGNATGLSEKSLVSDSTDKAKGEVVEVEEVE 576
Query: 436 ISPNTHSIMKTKQTKDEQDKSIDEE 510
+ +M Q+KSI EE
Sbjct: 577 LVEKVQEMMLETNEASGQEKSIVEE 601
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/107 (21%), Positives = 47/107 (43%)
Frame = +1
Query: 247 KIENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVG 426
K D +++ +E+ T N + +E+ K K + T + +K K+N+
Sbjct: 416 KENKDKTKNNKDKTKENKDKTKENKDKTKEN-KDKTKENKDKTKENKDKTKENKDKTKEN 474
Query: 427 RTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDPTED 567
+ N KTK+ KD+ ++ D+ + KT+ K ++ +D
Sbjct: 475 KDKTKENKD---KTKENKDKTKENKDKTKNNKDKTKENKDKTNENKD 518
Score = 27.5 bits (58), Expect = 8.4
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +1
Query: 247 KIENDCDSCSE--EVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPN 420
K +N+ D E + +E+ T N + +E+ K K + T + +K K+N+
Sbjct: 421 KTKNNKDKTKENKDKTKENKDKTKENKDKTKEN-KDKTKENKDKTKENKDKTKENKDKTK 479
Query: 421 VGRTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDPTED 567
+ N KTK+ KD+ + D+ + KT K + +D
Sbjct: 480 ENKDKTKENKD---KTKENKDKTKNNKDKTKENKDKTNENKDKTKENKD 525
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 NTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGI-SPNTHSIMKTKQTK 480
++DT+N S ++S L+S N N DN + N + S N++S
Sbjct: 9 DSDTSNSDNSNSDNLNSDNLNSDKLKSDNSNSDNSNSDNSNSDKLKSDNSNSEKLNSNNS 68
Query: 481 DEQDKSID 504
D + + D
Sbjct: 69 DSNNSNSD 76
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/106 (17%), Positives = 40/106 (37%)
Frame = +1
Query: 256 NDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTG 435
++ D+ + + L +D +N + S +S S N N DN + +
Sbjct: 38 SNSDNSNSDNSNSDKLKSDNSNSEKLNSNNSDSNNSNSDNSNSDNSNSDNSNSDKLKLVN 97
Query: 436 ISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDPTEDDK 573
+P+ + K K DK ++ + + + SD + +K
Sbjct: 98 SNPDNSNSDKLKLVNSNSDK-LNSDNSNSDNSNSDNSNSDNSNSNK 142
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Frame = +1
Query: 259 DCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGI 438
D + E V+ + + + SG + S ++ KNK+ N +
Sbjct: 352 DSEGAQEAVVTQQKGTDEGKRACVNPSGGESSAHKSERKKKTPKKNKNQLDSENSNTGNV 411
Query: 439 SPNTHSIM-KTKQTKDEQDKSIDEETVIEPKTRARKKASDPTEDD 570
KTK+ K+I+EE E R + +D T D+
Sbjct: 412 ENEKKGTKDKTKKKSKNNSKNIEEEDGREKPKETRIEKTDVTIDN 456
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 463 KTKQTKDEQDKSID-EETVIEPKTRARKKASDPTEDDK 573
K K+ ++E DK + EE + K +KK + EDDK
Sbjct: 1904 KKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDK 1941
>SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = -2
Query: 154 LDNLSDGISKNHNKQLFTYTMHHNMR 77
LDN+ + + K ++++FT+T++H +R
Sbjct: 243 LDNILNEVIKAISRKVFTFTLNHRLR 268
>SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12)
Length = 1286
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -3
Query: 135 ESRKTTINSYLHTQCTIICEKVQ*KRAI 52
E+ + T + YL+T+C +IC ++ + I
Sbjct: 736 ETLQATAHGYLNTRCNVICRQINPNKEI 763
>SB_16002| Best HMM Match : Clathrin (HMM E-Value=1.1)
Length = 977
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/80 (17%), Positives = 38/80 (47%)
Frame = +1
Query: 316 NNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDK 495
N+ ++E + +++V R+ + + ++ +P R S + T ++ D+ +
Sbjct: 173 NDDKVESVSNTEEEELATVETRAQKRKRKSETVPE--RAATSKTATMTVSTIESHDQNVE 230
Query: 496 SIDEETVIEPKTRARKKASD 555
+ +IE + + RK+ +D
Sbjct: 231 EDESGIIIETRAQKRKREND 250
>SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/80 (21%), Positives = 36/80 (45%)
Frame = +1
Query: 316 NNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDK 495
NN ES +++V R+ + + ++ +P R S T + T ++ D+ +
Sbjct: 346 NNDDKAESVSNTEEEMATVETRAQKRKRKSETVPE--RAATSKTTTMTVSTIESHDQNVE 403
Query: 496 SIDEETVIEPKTRARKKASD 555
+IE + + RK+ +D
Sbjct: 404 EDKSGIIIETRAQKRKREND 423
>SB_48463| Best HMM Match : Extensin_2 (HMM E-Value=0.075)
Length = 361
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 138 MESRKTTINSYLHTQCTIICEKVQ 67
ME+ TT+ Y+ T TI+C+ ++
Sbjct: 56 METHPTTVYDYIETHPTIVCDYIE 79
>SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/80 (21%), Positives = 36/80 (45%)
Frame = +1
Query: 316 NNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDK 495
NN ES +++V R+ + + ++ +P R S T + T ++ D+ +
Sbjct: 346 NNDDKAESVSNTEEEMATVETRAQKRKRKSETVPE--RAATSKTTTMTVSTIESHDQNVE 403
Query: 496 SIDEETVIEPKTRARKKASD 555
+IE + + RK+ +D
Sbjct: 404 EDKSGIIIETRAQKRKREND 423
>SB_27136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 298 SLNTDTNNLQIEESGKKKPRGISSVTLRSTNKNKDNQHLPNV-GRTGISPNTHSIMKTKQ 474
S +NL E S +G L S NK+N+HL V G SP + ++
Sbjct: 355 STEATNDNLSDESSDSLSNQGQPGALLGSLAANKENRHLLFVESVNGSSPPNSQSVNHRR 414
Query: 475 TKDEQD 492
+ D D
Sbjct: 415 SHDSSD 420
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,190,106
Number of Sequences: 59808
Number of extensions: 356858
Number of successful extensions: 1233
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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