Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M22
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   1.3  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    24   4.1  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   5.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   7.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   7.2  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +1

Query: 115 YCGFSRFHR-INCPDGILWRRVMAE 186
           YC    F   ++CPD  LW+R M E
Sbjct: 426 YCEPRTFEEAMSCPDRDLWKRAMEE 450


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 478 KDEQDKSIDEETVIEPKTRARKKASDP 558
           + E+D+ ID++ +  P+ R R   +DP
Sbjct: 80  RPEEDELIDQKAIRAPQLRLRFGRNDP 106


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 348 FFTGLFNLKIICICI*TVFFYYFF 277
           F+ G  +  I C  + T F YY++
Sbjct: 558 FYFGTASFAIPCFVVLTFFIYYYY 581


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = +1

Query: 382 STNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDP 558
           ST +NK  + +        SP+T S+M  +Q   E   S        PK     K S P
Sbjct: 346 STVENKKKRKMSTTCDNS-SPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSP 403


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = +1

Query: 382 STNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDP 558
           ST +NK  + +        SP+T S+M  +Q   E   S        PK     K S P
Sbjct: 346 STVENKKKRKMSTTCDNS-SPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSP 403


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = +1

Query: 382 STNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDP 558
           ST +NK  + +        SP+T S+M  +Q   E   S        PK     K S P
Sbjct: 298 STVENKKKRKMSTTCDNS-SPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSP 355


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = +1

Query: 382 STNKNKDNQHLPNVGRTGISPNTHSIMKTKQTKDEQDKSIDEETVIEPKTRARKKASDP 558
           ST +NK  + +        SP+T S+M  +Q   E   S        PK     K S P
Sbjct: 306 STVENKKKRKMSTTCDNS-SPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSP 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,520
Number of Sequences: 2352
Number of extensions: 11092
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)