Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M21
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    26   0.21 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    26   0.28 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.65 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   4.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.0  

>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 601 PNPTMPTVAPASXGPVIQVGAHETQPPV-LASCIASGT 491
           P PT+P + PA         A E+  P   +SC+ S T
Sbjct: 207 PKPTVPKIPPAEFPTTSSSSALESPDPASRSSCLGSNT 244


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 601 PNPTMPTVAPASXGPVIQVGAHET-QPPVLASCIASGT 491
           P PT+P + PA         A E+  P   +SC+ S T
Sbjct: 207 PKPTVPKIPPAEFPTTSSSSALESPNPASRSSCLGSNT 244


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 204 HIDLLEVVLHSLAYQTSSRIFDIVLLHSCSLQ*QYHH 94
           H+    V+++S+  QT   +FD +  H+      Y H
Sbjct: 124 HLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIH 160


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 243 LSALEKVDSID*HHIDLLEVVLHSLAYQTSSRIFDI 136
           +S ++ V+    HH++   + +   +  +SSRI DI
Sbjct: 1   MSEMQSVEGAMVHHLEPHRMQIKPQSPSSSSRILDI 36


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 243 LSALEKVDSID*HHIDLLEVVLHSLAYQTSSRIFDI 136
           +S ++ V+    HH++   + +   +  +SSRI DI
Sbjct: 1   MSEMQSVEGAMVHHLEPHRMQIKPQSPSSSSRILDI 36


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 556 VIQVGAHETQPPV 518
           V+QVG H   PPV
Sbjct: 684 VLQVGTHADLPPV 696


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 450 QLHQSKHPECTQYGHPFS 397
           Q +Q +HP    YG+ +S
Sbjct: 379 QGYQGEHPNYNHYGYHYS 396


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 450 QLHQSKHPECTQYGHPFS 397
           Q +Q +HP    YG+ +S
Sbjct: 327 QGYQGEHPNYNHYGYHYS 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,696
Number of Sequences: 336
Number of extensions: 3349
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)