Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M16
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            25   3.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.0  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    24   4.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.3  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   7.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   7.0  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   9.2  

>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 571 NWEKCICRIKVCLWEYRWFP 512
           N   C CR  +C  E++W P
Sbjct: 30  NLNYCCCRGSMCNREHKWIP 49


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 640 LCKSLTEPIHIHWIIIKFPECLSNWE 563
           +C++ T  I +H   +  PEC + W+
Sbjct: 905 VCEAPTNVIAVHSQTLHIPECPNGWD 930


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +3

Query: 477 YSWRCGF*KMKNGNHLYSQRQTLIL--QIHFSQLLRHSGNFMMIQWMCI 617
           Y W     + K G   Y++ QTL L  + HF++ L       +   +C+
Sbjct: 235 YPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 581  LRELYDDPVDVYWFSKRFTEVVKNMXKDLNKLKEAF 688
            +R+LYDD        KRFTE ++       KLKE +
Sbjct: 1116 MRQLYDDVR-----KKRFTEFMRGFHIITKKLKEMY 1146


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 401 LYAVEKLQLIEPSEIYDGSGTPQSKVFL 484
           LY V+ + L E S I+DG GTP  ++ L
Sbjct: 226 LYFVKDV-LKEASTIHDGIGTPDWRLVL 252


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 401 LYAVEKLQLIEPSEIYDGSGTPQSKVFL 484
           LY V+ + L E S I+DG GTP  ++ L
Sbjct: 226 LYFVKDV-LKEASTIHDGIGTPDWRLVL 252


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 362 YVMKQRTEQYQDLLYAVEK 418
           +VM  RTE+YQ L   VEK
Sbjct: 24  WVMVYRTEKYQKLKGEVEK 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,701
Number of Sequences: 2352
Number of extensions: 13248
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)