Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M16
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3480|AAF56247.3|  306|Drosophila melanogaster CG6182-PA...    99   5e-21
AY119593-1|AAM50247.1|  261|Drosophila melanogaster LD17019p pro...    71   1e-12
AY052062-1|AAK93486.1|  399|Drosophila melanogaster LP10120p pro...    31   1.1  
AE014296-3372|AAF51606.1|  399|Drosophila melanogaster CG5932-PA...    31   1.1  

>AE014297-3480|AAF56247.3|  306|Drosophila melanogaster CG6182-PA
           protein.
          Length = 306

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
 Frame = +2

Query: 155 RNFRSSYYXXVGCRGVXXKXTLEILMKEKPWDRVKLKQFCLRFTVFADYRNLVWKVLLDI 334
           RNFRS YY       V  + +L  L+++   +  KLKQFC+ +TV  + R+ +W +++ I
Sbjct: 6   RNFRSIYYEKCQINSVEEQKSLNKLLQDDIRNLSKLKQFCMNYTVPNNNRSYLWALVMGI 65

Query: 335 LPVYPDSYEYVMKQRTEQYQDLLYAVEKLQLIEPSE-----IYDGSGTPQSKVFLEMWVL 499
           LP++  S  YV  QR E Y+DL  AV  L+  +  +     ++      +++V   MW++
Sbjct: 66  LPLHKASTAYVRDQRREMYEDLRRAVTVLRFTDHKQKEQPFMWLIDHKKKAQVMHTMWLI 125

Query: 500 E-NEEWKPPVFPETNFNSADTFLPIAKTLRELYDDPVDVYWFSKRFTEVVKNMXKDLNKL 676
           E N  W          +    F+ I +TL +++DD V+ YW +K F +  + + K+  KL
Sbjct: 126 ESNRLWHGNTSASLQADDMH-FIEIVRTLLQIFDDNVETYWIAKGFYKYTRELKKECVKL 184

Query: 677 KEAFYNM 697
           KE   N+
Sbjct: 185 KEQTQNI 191


>AY119593-1|AAM50247.1|  261|Drosophila melanogaster LD17019p
           protein.
          Length = 261

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
 Frame = +2

Query: 275 LRFTVFADYRNLVWKVLLDILPVYPDSYEYVMKQRTEQYQDLLYAVEKLQLIEPSE---- 442
           + +TV  + R+ +W +++ ILP++  S  YV  QR E Y+DL  AV  L+  +  +    
Sbjct: 1   MNYTVPNNNRSYLWALVMGILPLHKASTAYVRDQRREMYEDLRRAVTVLRFTDHKQKEQP 60

Query: 443 -IYDGSGTPQSKVFLEMWVLE-NEEWKPPVFPETNFNSADTFLPIAKTLRELYDDPVDVY 616
            ++      +++V   MW++E N  W          +    F+ I +TL +++DD V+ Y
Sbjct: 61  FMWLIDHKKKAQVMHTMWLIESNRLWHGNTSASLQADDMH-FIEIVRTLLQIFDDNVETY 119

Query: 617 WFSKRFTEVVKNMXKDLNKLKEAFYNM 697
           W +K F +  + + K+  KLKE   N+
Sbjct: 120 WIAKGFYKYTRELKKECVKLKEQTQNI 146


>AY052062-1|AAK93486.1|  399|Drosophila melanogaster LP10120p
           protein.
          Length = 399

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +2

Query: 356 YEYVMKQRTEQY-QDLLYAVEKLQLIEPSEIYDGS-----GTPQSKVFLEMWVLENEEWK 517
           Y++  K+  E Y QDL    +  +++ P+ +Y  +     G       +E +    E+++
Sbjct: 305 YDWGTKKNNELYGQDLPPDYDLSKIVAPTHLYSSTNDALCGPEDVNTLVENFPHLTEDYR 364

Query: 518 PPVFPETNFNSADTFLPIAKTLRELYDDPV 607
            PV    +FN  D F+ IAK ++EL +DP+
Sbjct: 365 VPV---QSFNHLD-FI-IAKNMKELVNDPI 389


>AE014296-3372|AAF51606.1|  399|Drosophila melanogaster CG5932-PA
           protein.
          Length = 399

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +2

Query: 356 YEYVMKQRTEQY-QDLLYAVEKLQLIEPSEIYDGS-----GTPQSKVFLEMWVLENEEWK 517
           Y++  K+  E Y QDL    +  +++ P+ +Y  +     G       +E +    E+++
Sbjct: 305 YDWGTKKNNELYGQDLPPDYDLSKIVAPTHLYSSTNDALCGPEDVNTLVENFPHLTEDYR 364

Query: 518 PPVFPETNFNSADTFLPIAKTLRELYDDPV 607
            PV    +FN  D F+ IAK ++EL +DP+
Sbjct: 365 VPV---QSFNHLD-FI-IAKNMKELVNDPI 389


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,568,981
Number of Sequences: 53049
Number of extensions: 566414
Number of successful extensions: 1115
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)