Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M15
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17450-1|CAB44344.1|   57|Homo sapiens EST00098 protein protein.       36   0.16 
BC008887-1|AAH08887.1|   83|Homo sapiens chromosome 9 open readi...    36   0.16 
BC001857-1|AAH01857.1|   83|Homo sapiens chromosome 9 open readi...    36   0.16 
AL590708-5|CAI13825.1|   83|Homo sapiens chromosome 9 open readi...    36   0.16 
BC106033-1|AAI06034.1|  459|Homo sapiens SMC4 protein protein.         30   6.1  
BC070161-1|AAH70161.1|  459|Homo sapiens SMC4 protein protein.         30   6.1  
BC065259-1|AAH65259.1|  423|Homo sapiens SMC4 protein protein.         30   6.1  
BC001557-1|AAH01557.1|  459|Homo sapiens SMC4 protein protein.         30   6.1  
AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p...    30   6.1  
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p...    30   6.1  

>Y17450-1|CAB44344.1|   57|Homo sapiens EST00098 protein protein.
          Length = 57

 Score = 35.5 bits (78), Expect = 0.16
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 194 DFLERKNDDIHQQLKELLQSNIAIRQEMREE 286
           D LE KND +H +L+ELL+SN   R E +++
Sbjct: 17  DHLEEKNDHLHARLQELLESNRQTRLEFQQQ 47


>BC008887-1|AAH08887.1|   83|Homo sapiens chromosome 9 open reading
           frame 16 protein.
          Length = 83

 Score = 35.5 bits (78), Expect = 0.16
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 194 DFLERKNDDIHQQLKELLQSNIAIRQEMREE 286
           D LE KND +H +L+ELL+SN   R E +++
Sbjct: 43  DHLEEKNDHLHARLQELLESNRQTRLEFQQQ 73


>BC001857-1|AAH01857.1|   83|Homo sapiens chromosome 9 open reading
           frame 16 protein.
          Length = 83

 Score = 35.5 bits (78), Expect = 0.16
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 194 DFLERKNDDIHQQLKELLQSNIAIRQEMREE 286
           D LE KND +H +L+ELL+SN   R E +++
Sbjct: 43  DHLEEKNDHLHARLQELLESNRQTRLEFQQQ 73


>AL590708-5|CAI13825.1|   83|Homo sapiens chromosome 9 open reading
           frame 16 protein.
          Length = 83

 Score = 35.5 bits (78), Expect = 0.16
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 194 DFLERKNDDIHQQLKELLQSNIAIRQEMREE 286
           D LE KND +H +L+ELL+SN   R E +++
Sbjct: 43  DHLEEKNDHLHARLQELLESNRQTRLEFQQQ 73


>BC106033-1|AAI06034.1|  459|Homo sapiens SMC4 protein protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 200 LERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 307
           +E + + IH+  KE+ + +  +  EM+ +NKDV ++
Sbjct: 337 METQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDT 372


>BC070161-1|AAH70161.1|  459|Homo sapiens SMC4 protein protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 200 LERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 307
           +E + + IH+  KE+ + +  +  EM+ +NKDV ++
Sbjct: 337 METQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDT 372


>BC065259-1|AAH65259.1|  423|Homo sapiens SMC4 protein protein.
          Length = 423

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 200 LERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 307
           +E + + IH+  KE+ + +  +  EM+ +NKDV ++
Sbjct: 337 METQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDT 372


>BC001557-1|AAH01557.1|  459|Homo sapiens SMC4 protein protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 200 LERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 307
           +E + + IH+  KE+ + +  +  EM+ +NKDV ++
Sbjct: 337 METQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDT 372


>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
           protein-C protein.
          Length = 1202

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 200 LERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 307
           +E + + IH+  KE+ + +  +  EM+ +NKDV ++
Sbjct: 251 METQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDT 286


>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
           polypeptide-C protein.
          Length = 1288

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 200 LERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 307
           +E + + IH+  KE+ + +  +  EM+ +NKDV ++
Sbjct: 337 METQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDT 372


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,181,969
Number of Sequences: 237096
Number of extensions: 1235850
Number of successful extensions: 2106
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)