Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M13
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129820-1|AAI29821.1|  414|Homo sapiens FLJ36144 protein protein.     31   1.8  
AK128822-1|BAC87623.1|  555|Homo sapiens protein ( Homo sapiens ...    31   1.8  
AK093463-1|BAC04173.1|  650|Homo sapiens protein ( Homo sapiens ...    31   1.8  
BC065199-1|AAH65199.1|  453|Homo sapiens family with sequence si...    29   7.2  
BC037572-1|AAH37572.1|  453|Homo sapiens family with sequence si...    29   7.2  
AJ272268-1|CAB75962.1|  997|Homo sapiens calcium channel alpha2-...    29   7.2  
AJ272213-1|CAB75878.1|  519|Homo sapiens calcium channel alpha2-...    29   7.2  
AF516696-1|AAN06673.1| 1091|Homo sapiens voltage-gated calcium c...    29   7.2  
AF123073-1|AAK01477.1|  453|Homo sapiens C/EBP-induced protein p...    29   7.2  

>BC129820-1|AAI29821.1|  414|Homo sapiens FLJ36144 protein protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 202 GFIVPAGHSAGDGSPLSTPAGCE-SELGFGHYEASQXQGIES*IC 71
           G + PAG  AG+GSP   P   E  +L  G   A Q  G+ S  C
Sbjct: 353 GSVEPAGGEAGEGSPQDNPTAQEIMQLFCGMKNAQQCPGLGSTSC 397


>AK128822-1|BAC87623.1|  555|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46108 fis, clone TESTI2030519. ).
          Length = 555

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 202 GFIVPAGHSAGDGSPLSTPAGCE-SELGFGHYEASQXQGIES*IC 71
           G + PAG  AG+GSP   P   E  +L  G   A Q  G+ S  C
Sbjct: 494 GSVEPAGGEAGEGSPQDNPTAQEIMQLFCGMKNAQQCPGLGSTSC 538


>AK093463-1|BAC04173.1|  650|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36144 fis, clone TESTI2025022, weakly similar to
           TRICHOHYALIN. ).
          Length = 650

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 202 GFIVPAGHSAGDGSPLSTPAGCE-SELGFGHYEASQXQGIES*IC 71
           G + PAG  AG+GSP   P   E  +L  G   A Q  G+ S  C
Sbjct: 589 GSVEPAGGEAGEGSPQDNPTAQEIMQLFCGMKNAQQCPGLGSTSC 633


>BC065199-1|AAH65199.1|  453|Homo sapiens family with sequence
           similarity 117, member A protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 120 KPNSLSHPAGVERGLPSPALCPAGTMKPWRLFI 218
           K +S  HPA +E G PSP L  A + +P   +I
Sbjct: 303 KASSPGHPAFLEDGSPSPVLAFAASPRPNHSYI 335


>BC037572-1|AAH37572.1|  453|Homo sapiens family with sequence
           similarity 117, member A protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 120 KPNSLSHPAGVERGLPSPALCPAGTMKPWRLFI 218
           K +S  HPA +E G PSP L  A + +P   +I
Sbjct: 303 KASSPGHPAFLEDGSPSPVLAFAASPRPNHSYI 335


>AJ272268-1|CAB75962.1|  997|Homo sapiens calcium channel
           alpha2-delta3 subunit protein.
          Length = 997

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 25  VAVSKSLKELPQPKMYKFTILFLXFGLLHNGRSPTHFHIQLGWKEGCHRR 174
           V V + LK +P+   YK  I    F + +NG   TH  ++L ++EG  RR
Sbjct: 410 VPVKELLKTIPK---YKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRR 456


>AJ272213-1|CAB75878.1|  519|Homo sapiens calcium channel
           alpha2-delta3 subunit protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 25  VAVSKSLKELPQPKMYKFTILFLXFGLLHNGRSPTHFHIQLGWKEGCHRR 174
           V V + LK +P+   YK  I    F + +NG   TH  ++L ++EG  RR
Sbjct: 404 VPVKELLKTIPK---YKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRR 450


>AF516696-1|AAN06673.1| 1091|Homo sapiens voltage-gated calcium
           channel alpha(2)delta-3 subunit protein.
          Length = 1091

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 25  VAVSKSLKELPQPKMYKFTILFLXFGLLHNGRSPTHFHIQLGWKEGCHRR 174
           V V + LK +P+   YK  I    F + +NG   TH  ++L ++EG  RR
Sbjct: 504 VPVKELLKTIPK---YKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRR 550


>AF123073-1|AAK01477.1|  453|Homo sapiens C/EBP-induced protein
           protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 120 KPNSLSHPAGVERGLPSPALCPAGTMKPWRLFI 218
           K +S  HPA +E G PSP L  A + +P   +I
Sbjct: 303 KASSPGHPAFLEDGSPSPVLAFAASPRPNHSYI 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,702,416
Number of Sequences: 237096
Number of extensions: 1266570
Number of successful extensions: 2700
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)