Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_M09
(785 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 28 0.097
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 28 0.097
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 27 0.13
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 23 2.8
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 22 4.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 27.9 bits (59), Expect = 0.097
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Frame = +3
Query: 81 DSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSF------SGREFDDLP 242
D I RC A G+R+ V T N T G G D GK++ SG D
Sbjct: 98 DMISRCNAVGVRIYVDTVINHMTGMG---GTGTAGSQADRDGKNYPAVPYGSGDFHDSCT 154
Query: 243 IAEQRSA-----CAKARL--FSRVEPAHKSKIVEYLQSMNEISAMTGDGVNDAPALKKAE 401
+ + A C L ++ +SKI+EY+ + ++ + G V+ A + A+
Sbjct: 155 VNNYQDASNVRNCELVGLADLNQGSDYVRSKIIEYMNHLVDL-GVAGFRVDAAKHMWPAD 213
Query: 402 IGIAMGS 422
+ GS
Sbjct: 214 LEAIYGS 220
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 27.9 bits (59), Expect = 0.097
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Frame = +3
Query: 81 DSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSF------SGREFDDLP 242
D I RC A G+R+ V T N T G G D GK++ SG D
Sbjct: 98 DMISRCNAVGVRIYVDTVINHMTGMG---GTGTAGSQADRDGKNYPAVPYGSGDFHDSCT 154
Query: 243 IAEQRSA-----CAKARL--FSRVEPAHKSKIVEYLQSMNEISAMTGDGVNDAPALKKAE 401
+ + A C L ++ +SKI+EY+ + ++ + G V+ A + A+
Sbjct: 155 VNNYQDASNVRNCELVGLADLNQGSDYVRSKIIEYMNHLVDL-GVAGFRVDAAKHMWPAD 213
Query: 402 IGIAMGS 422
+ GS
Sbjct: 214 LEAIYGS 220
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 27.5 bits (58), Expect = 0.13
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 81 DSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSF 215
D I RC A G+R+ V T N T G G D GK++
Sbjct: 97 DMISRCNAVGVRIYVDTVINHMTGMG---GTGTAGSQADRDGKNY 138
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 690 PDLDIMDKPPRKAD 731
P++DI DKP +K D
Sbjct: 66 PEIDIEDKPAQKID 79
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 196 SSSSPNTPIRLQMASAVDLLSP 131
S PN+P+ M LLSP
Sbjct: 39 SPQGPNSPVSFSMGGHGSLLSP 60
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 102 AAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSFSGREFDDLPIAEQRSACAKAR 278
+ G+R + DN S E+ ++G T ++ F D PI E+ + A +
Sbjct: 3 SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTVQETKGWDVFRDPPIKEESGSMANQK 61
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 102 AAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSFSGREFDDLPIAEQRSACAKAR 278
+ G+R + DN S E+ ++G T ++ F D PI E+ + A +
Sbjct: 3 SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTVQETKGWDVFRDPPIKEESGSMANQK 61
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 102 AAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSFSGREFDDLPIAEQRSACAKAR 278
+ G+R + DN S E+ ++G T ++ F D PI E+ + A +
Sbjct: 3 SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTVQETKGWDVFRDPPIKEESGSMANQK 61
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 102 AAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSFSGREFDDLPIAEQRSACAKAR 278
+ G+R + DN S E+ ++G T ++ F D PI E+ + A +
Sbjct: 3 SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTVQETKGWDVFRDPPIKEESGSMANQK 61
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,854
Number of Sequences: 336
Number of extensions: 3061
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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