Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M09
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   6.1  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.1  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -1

Query: 416 HGNTNLGLLQSRCVIHTVT---SHGGDLVHALQVLYDLRLVR 300
           HG T LG+L        VT    H G+L   L  LYD +L R
Sbjct: 204 HGPTELGVLVRPMHPPNVTCAWDHAGELASDLYALYDEQLDR 245


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -1

Query: 416 HGNTNLGLLQSRCVIHTVT---SHGGDLVHALQVLYDLRLVR 300
           HG T LG+L        VT    H G+L   L  LYD +L R
Sbjct: 204 HGPTELGVLVRPMHPPNVTCAWDHAGELASDLYALYDEQLDR 245


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 372 NDAPALKKAEIGIAMGSGTAVA 437
           +D PAL+KA++      GTA+A
Sbjct: 565 DDGPALEKAQLYQLESDGTAIA 586


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = -2

Query: 250 SAMGRSSNSRPEKDLPVVSSSSPNTPIRLQMASAVDLLSPVMTITRIPAARQRTIESKTS 71
           SA+ R  +   +  LP    +  N+P+        +LLS   T    PAA   T  S T+
Sbjct: 440 SALVRGMDLMDDMPLPYHDHNHHNSPMS---PINFNLLSAASTAVPNPAATNATANSTTT 496

Query: 70  LRGG 59
             GG
Sbjct: 497 GAGG 500


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -2

Query: 382 GASFTPSPVMAEISFMLCRYSTILDLCAGSTRENRRALAQALRCSAM 242
           G   + S ++A ++  + RY+  +   A +TRE RR L +  R SA+
Sbjct: 790 GPKMSKSRLLAAVADSVMRYAAPVWHEALNTRECRRLLERVQRKSAI 836


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,861
Number of Sequences: 2352
Number of extensions: 14603
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)