Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M09
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.80 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   4.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.3  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 66  RKEVFDSIVRCRAAGIRVIV 125
           R++  D + RC  AG+R+ V
Sbjct: 94  REQFIDMVARCNKAGVRIYV 113


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 387 LKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNI- 563
           L+  +I    G   + + SA   ++ + +  SIV  +EEG+   +   +++  L    + 
Sbjct: 106 LELTQIRRDRGLHVSCSFSAGSTIIREGDVGSIVYVMEEGKVEVSRDGKYLSTLAPGKVL 165

Query: 564 GEVVSIF 584
           GE+  ++
Sbjct: 166 GELAILY 172


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 701 HHGQAPSQG*RRSHLRMAVLXIHGYRW 781
           HHG A  +G R+ + R       G+ W
Sbjct: 156 HHGMAYHRGHRKDYERWVQQGAFGWSW 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,867
Number of Sequences: 438
Number of extensions: 4028
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)