Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M08
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    29   0.056
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.5  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   8.5  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 0.056
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 209 RYKKVQKYLKFYYNNYGFHQPYQVLIDGTFC 301
           + KK ++Y  +YY  +G H  Y V+I  + C
Sbjct: 106 KIKKTKRYCYYYYAFFGVHLAYGVVIIYSIC 136


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 280 DLVRLMKSIIVVIKL*IFLYFFVTCY 203
           D V++ ++ ++ + L IF Y  VTCY
Sbjct: 123 DRVKVYQAPVLQLFLYIFTYLSVTCY 148


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 491 QPPVLCAHIHEYQTVLI 441
           QPP   +H+H +QT L+
Sbjct: 126 QPPTDNSHVHHHQTSLL 142


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 352 VLGNLLSDVNM--LFECSETK---CTIDKDLVRLMKSIIVVIKL*IFLYFFVTCYFHFLL 188
           VLG   + +++  L E SE     C    DL R  +  ++ I   +  YFF++ +F+F  
Sbjct: 193 VLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLTI-FGVSFYFFISTFFYFFT 251

Query: 187 RTSLL 173
             +++
Sbjct: 252 TGNII 256


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 352 VLGNLLSDVNM--LFECSETK---CTIDKDLVRLMKSIIVVIKL*IFLYFFVTCYFHFLL 188
           VLG   + +++  L E SE     C    DL R  +  ++ I   +  YFF++ +F+F  
Sbjct: 189 VLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLTI-FGVSFYFFISTFFYFFT 247

Query: 187 RTSLL 173
             +++
Sbjct: 248 TGNII 252


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 611 LHNKSPTLEKPSSVSF 658
           LH+K+P L++P  V F
Sbjct: 300 LHDKTPFLKRPYPVPF 315


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 638 SLMLVTCYVDIEEEL 594
           +LML+ C+ D++E +
Sbjct: 8   ALMLIACHKDVQETI 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,312
Number of Sequences: 336
Number of extensions: 3489
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)