Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_M08
         (792 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022441-1|AAH22441.1|  249|Homo sapiens chromosome 8 open readi...   165   2e-40
BC005955-1|AAH05955.1|  249|Homo sapiens chromosome 8 open readi...   165   2e-40
AK055279-1|BAB70896.1|  145|Homo sapiens protein ( Homo sapiens ...   129   1e-29
AF132969-1|AAD27744.1|  198|Homo sapiens CGI-35 protein protein.       73   2e-12
BC080600-1|AAH80600.1|  109|Homo sapiens FCF1 protein protein.         59   2e-08

>BC022441-1|AAH22441.1|  249|Homo sapiens chromosome 8 open reading
           frame 53 protein.
          Length = 249

 Score =  165 bits (401), Expect = 2e-40
 Identities = 78/181 (43%), Positives = 121/181 (66%), Gaps = 6/181 (3%)
 Frame = +2

Query: 197 MKITRYKKVQKYLKFYYNNYGFHQPYQVLIDGTFCFAAFKEHINIREQIPKYLNSQAKLL 376
           MKITR K  +K+L F+ NN+G  +PYQ+L+DGTFC AA +  I +REQ+P+YL  + +L 
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLC 60

Query: 377 TTRCIIIETEKLAKKTHGALTILKQFGIHECGH-KEPVAGSKCIMSMIGKKNEKHYILAT 553
           TTRC++ E E L K  +GA  I ++  +  C H K  V+GS+C++SM+ + N  HY +AT
Sbjct: 61  TTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVAT 120

Query: 554 QDRDLQSKLREKPGVPLLYLHNKSPTLEKPS--SVSFEKA---GQALETNEHIFITEIQS 718
           QD++L  K+++KPGVPL+++   +  L+KPS  +++F KA   GQ +  +E   I  ++ 
Sbjct: 121 QDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTIAFVKAVESGQLVSVHEKESIKHLKE 180

Query: 719 E 721
           E
Sbjct: 181 E 181


>BC005955-1|AAH05955.1|  249|Homo sapiens chromosome 8 open reading
           frame 53 protein.
          Length = 249

 Score =  165 bits (401), Expect = 2e-40
 Identities = 78/181 (43%), Positives = 121/181 (66%), Gaps = 6/181 (3%)
 Frame = +2

Query: 197 MKITRYKKVQKYLKFYYNNYGFHQPYQVLIDGTFCFAAFKEHINIREQIPKYLNSQAKLL 376
           MKITR K  +K+L F+ NN+G  +PYQ+L+DGTFC AA +  I +REQ+P+YL  + +L 
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLC 60

Query: 377 TTRCIIIETEKLAKKTHGALTILKQFGIHECGH-KEPVAGSKCIMSMIGKKNEKHYILAT 553
           TTRC++ E E L K  +GA  I ++  +  C H K  V+GS+C++SM+ + N  HY +AT
Sbjct: 61  TTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVAT 120

Query: 554 QDRDLQSKLREKPGVPLLYLHNKSPTLEKPS--SVSFEKA---GQALETNEHIFITEIQS 718
           QD++L  K+++KPGVPL+++   +  L+KPS  +++F KA   GQ +  +E   I  ++ 
Sbjct: 121 QDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTIAFVKAVESGQLVSVHEKESIKHLKE 180

Query: 719 E 721
           E
Sbjct: 181 E 181


>AK055279-1|BAB70896.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30717 fis, clone FCBBF2001672. ).
          Length = 145

 Score =  129 bits (312), Expect = 1e-29
 Identities = 57/121 (47%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
 Frame = +2

Query: 197 MKITRYKKVQKYLKFYYNNYGFHQPYQVLIDGTFCFAAFKEHINIREQIPKYLNSQAKLL 376
           MKITR K  +K+L F+ NN+G  +PYQ+L+DGTFC AA +  I +REQ+P+YL  + +L 
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLC 60

Query: 377 TTRCIIIETEKLAKKTHGALTILKQFGIHECGH-KEPVAGSKCIMSMIGKKNEKHYILAT 553
           TTRC++ E E L K  +GA  I ++  +  C H K  V+GS+C++SM+ + N  HY +AT
Sbjct: 61  TTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVAT 120

Query: 554 Q 556
           Q
Sbjct: 121 Q 121


>AF132969-1|AAD27744.1|  198|Homo sapiens CGI-35 protein protein.
          Length = 198

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
 Frame = +2

Query: 239 FYYNNYGFHQPYQVLIDGTFCFAAFKEHINIREQIPKYLNSQAKLLTTRCIIIETEKLAK 418
           F+  N     PY +L+D  F   + K  +++ + +   L ++     T C++ E EKL +
Sbjct: 56  FFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQ 115

Query: 419 KTHGALTILK--QFGIHECGHKEPVAGSKCIMSMIGKKNEKHYILATQDRDLQSKLREKP 592
           K   AL I K  +F    C HK   A   C++  + +   K YI+AT DRDL+ ++R+ P
Sbjct: 116 KYRVALRIAKDPRFERLPCTHKGTYADD-CLVQRVTQ--HKCYIVATVDRDLKRRIRKIP 172

Query: 593 GVPLLYLHNKSPTLEK 640
           GVP++Y+ N    +E+
Sbjct: 173 GVPIMYISNHRYNIER 188


>BC080600-1|AAH80600.1|  109|Homo sapiens FCF1 protein protein.
          Length = 109

 Score = 59.3 bits (137), Expect = 2e-08
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +2

Query: 380 TRCIIIETEKLAKKTHGALTILK--QFGIHECGHKEPVAGSKCIMSMIGKKNEKHYILAT 553
           T C++ E EKL +K   AL I K  +F    C HK   A   C++  + +   K YI+AT
Sbjct: 14  TDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADD-CLVQRVTQ--HKCYIVAT 70

Query: 554 QDRDLQSKLREKPGVPLLYLHNKSPTLEK 640
            DRDL+ ++R+ PGVP++Y+ N    +E+
Sbjct: 71  VDRDLKRRIRKIPGVPIMYISNHRYNIER 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,776,679
Number of Sequences: 237096
Number of extensions: 1876247
Number of successful extensions: 4040
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4035
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)