Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_M08
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-1|AAK67218.1| 232|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U13019-6|AAC24443.1| 206|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical pr... 28 8.8
U41106-3|AAA82411.1| 261|Caenorhabditis elegans Hypothetical pr... 28 8.8
U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 8.8
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 28 8.8
>U10402-1|AAK67218.1| 232|Caenorhabditis elegans Hypothetical
protein C34E10.10 protein.
Length = 232
Score = 142 bits (345), Expect = 2e-34
Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 2/181 (1%)
Frame = +2
Query: 197 MKITRYKKVQKYLKFYYNNYGFHQPYQVLIDGTFCFAAFKEHINIREQIPKYLNSQAKLL 376
MK+ R K+ + L FY NY F PY+VL+DGTFC AA +E +N+ EQIPKYL + L+
Sbjct: 1 MKVKRLKRANRLLTFYKYNYKFVAPYRVLVDGTFCNAALQEKLNLAEQIPKYLTEETHLM 60
Query: 377 TTRCIIIETEKLAKKTHGALTILKQFGIHECGHKEPVAGSKCIMSMIGK--KNEKHYILA 550
TT C++ E EK +GA I KQF I EC H P A S C+ + + + Y++A
Sbjct: 61 TTNCVLKELEKFGPLLYGAFVIAKQFEIAECTHSTPRAASDCLAHLARRAASGKTKYLIA 120
Query: 551 TQDRDLQSKLREKPGVPLLYLHNKSPTLEKPSSVSFEKAGQALETNEHIFITEIQSETLK 730
TQD +L KLR G P++Y+ K+ L+ S + KAG + E +E + E+++ +
Sbjct: 121 TQDDELTEKLRAIVGTPIMYIKFKTVLLDNISEAT--KAGCSKEESEIKKLKELKNALIG 178
Query: 731 Q 733
Q
Sbjct: 179 Q 179
>Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical
protein F30A10.9 protein.
Length = 196
Score = 69.7 bits (163), Expect = 2e-12
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Frame = +2
Query: 194 KMKITRYKKVQKYLKFYYNNYGFHQPYQVLIDGTFCFAAFKEHINIREQIPKYLNSQAKL 373
++K+ R K+ + YN P+ V++D F A K I++ + L ++ +
Sbjct: 41 ELKLVRAPKISSAMFMKYNTQ-LGPPFHVIVDTNFVNFAVKNRIDMFQGFMDCLFAKTIV 99
Query: 374 LTTRCIIIETEKLAKKTHGALTILKQFGIH--ECGHKEPVAGSKCIMSMIGKKNEKHYIL 547
T C++ E EK+ ++ AL +LK + +C HK A C++ + + K YI+
Sbjct: 100 YATDCVLAELEKV-RRFKIALKVLKDPRVQRLKCEHKGTYADD-CLVQRVTQ--HKCYIV 155
Query: 548 ATQDRDLQSKLREKPGVPLLYLHNKSPTLEK 640
AT DRDL+ ++R+ PGVP++Y+ N ++E+
Sbjct: 156 ATCDRDLKRRIRKIPGVPIMYIVNHRFSIER 186
>U13019-6|AAC24443.1| 206|Caenorhabditis elegans Hypothetical
protein T12A2.3 protein.
Length = 206
Score = 28.3 bits (60), Expect = 6.7
Identities = 30/141 (21%), Positives = 58/141 (41%)
Frame = +2
Query: 311 FKEHINIREQIPKYLNSQAKLLTTRCIIIETEKLAKKTHGALTILKQFGIHECGHKEPVA 490
FKEH NI+ KY+NS++ + R I+ +L H + K+ + P +
Sbjct: 39 FKEH-NIKALTMKYVNSESMMWEARKIVRIISRLEADEHQSRVAPKR-------SRSPGS 90
Query: 491 GSKCIMSMIGKKNEKHYILATQDRDLQSKLREKPGVPLLYLHNKSPTLEKPSSVSFEKAG 670
S + +E + + + R + K+ K P + S T++ S +++
Sbjct: 91 TSPSASNSSSSSSELSFDMFSSKRTVPMKVTSK---PKRVIAQASRTMKPHQQESRQESA 147
Query: 671 QALETNEHIFITEIQSETLKQ 733
+ N+ I+S LK+
Sbjct: 148 EKDRANDEKLKKFIESRKLKE 168
>Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical
protein F19H6.3 protein.
Length = 914
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/77 (20%), Positives = 34/77 (44%)
Frame = +2
Query: 506 MSMIGKKNEKHYILATQDRDLQSKLREKPGVPLLYLHNKSPTLEKPSSVSFEKAGQALET 685
+S + K + H +A ++ D++ K R+KP L +PT + +
Sbjct: 359 VSDLKKSADSHTGIAQKEDDVEQKTRKKPVRSKLARKRSNPTRRSERLSEIQNNASKAQG 418
Query: 686 NEHIFITEIQSETLKQM 736
E + T ++S +K++
Sbjct: 419 QEEVVDTIVKSMLVKEV 435
>U41106-3|AAA82411.1| 261|Caenorhabditis elegans Hypothetical
protein W06A11.3 protein.
Length = 261
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 509 SMIGKKNEKHY-ILATQDRDLQSKLREKPGVPLLYLH 616
S K ++H L D DL+ LR++PGV L+Y H
Sbjct: 31 SFCSKSVKRHLKSLNVSDVDLRIVLRKQPGVCLMYCH 67
>U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical
protein F09E5.5 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 366 AWLFRYLGICSLMLICSLNAAKQNVP 289
AWL RYL +C +++ L AK +P
Sbjct: 282 AWLARYLEVCKNVIMDDLQLAKVAIP 307
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 157 KKRLFTKARFVIKNENNTLQKSTEISKVLLQ 249
KK L + ++KN N ++QKS E K+L Q
Sbjct: 845 KKELSDRLNEMLKNLNQSMQKSAENDKMLTQ 875
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 157 KKRLFTKARFVIKNENNTLQKSTEISKVLLQ 249
KK L + ++KN N ++QKS E K+L Q
Sbjct: 857 KKELSDRLNEMLKNLNQSMQKSAENDKMLTQ 887
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,665
Number of Sequences: 27780
Number of extensions: 311048
Number of successful extensions: 794
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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